RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 MACF1Q9UPN3 7388 aaKnown RBP0.91□□□□□ -2.26
HMGB1P1-201ENST00000522557 SYNE2Q8WXH0 6885 aaKnown RBP0.91□□□□□ -2.26
HMGB1P1-201ENST00000522557 NEBP20929 6669 aa0.9□□□□□ -2.26
HMGB1P1-201ENST00000522557 A0A087WVE0 104 aa0.9□□□□□ -2.27
HMGB1P1-201ENST00000522557 LEPROTL1O95214 131 aa0.9□□□□□ -2.27
HMGB1P1-201ENST00000522557 LINC00308Q8TCZ7 52 aa0.9□□□□□ -2.27
HMGB1P1-201ENST00000522557 KRTAP2-1Q9BYU5 128 aa0.9□□□□□ -2.27
HMGB1P1-201ENST00000522557 KMT2DO14686 5537 aa0.9□□□□□ -2.27
HMGB1P1-201ENST00000522557 IGLV5-48A0A075B6I7 105 aa0.89□□□□□ -2.27
HMGB1P1-201ENST00000522557 C3orf79P0CE67 100 aa0.89□□□□□ -2.27
HMGB1P1-201ENST00000522557 PLNP26678 52 aa0.89□□□□□ -2.27
HMGB1P1-201ENST00000522557 SPINK7P58062 85 aa0.89□□□□□ -2.27
HMGB1P1-201ENST00000522557 KRTAP19-3Q7Z4W3 81 aa0.89□□□□□ -2.27
HMGB1P1-201ENST00000522557 C18orf32Q8TCD1 76 aa0.89□□□□□ -2.27
HMGB1P1-201ENST00000522557 H1FX-AS1Q4G0G2 97 aa0.88□□□□□ -2.27
HMGB1P1-201ENST00000522557 MUSTN1Q8IVN3 82 aa0.88□□□□□ -2.27
HMGB1P1-201ENST00000522557 H3BUT2 72 aa0.87□□□□□ -2.27
HMGB1P1-201ENST00000522557 SPRR2EP22531 72 aa0.87□□□□□ -2.27
HMGB1P1-201ENST00000522557 SPRR2BP35325 72 aa0.87□□□□□ -2.27
HMGB1P1-201ENST00000522557 SPRR2AP35326 72 aa0.87□□□□□ -2.27
HMGB1P1-201ENST00000522557 LINC00472Q9H8W2 130 aa0.87□□□□□ -2.27
HMGB1P1-201ENST00000522557 NDUFB1O75438 58 aa0.86□□□□□ -2.27
HMGB1P1-201ENST00000522557 LINC00643Q86TS7 51 aa0.86□□□□□ -2.27
HMGB1P1-201ENST00000522557 WFDC13Q8IUB5 93 aa0.86□□□□□ -2.27
HMGB1P1-201ENST00000522557 H0YGX0 51 aa0.85□□□□□ -2.27
HMGB1P1-201ENST00000522557 ACYP1P07311 99 aa0.85□□□□□ -2.27
HMGB1P1-201ENST00000522557 SPRR2DP22532 72 aa0.85□□□□□ -2.27
HMGB1P1-201ENST00000522557 BVES-AS1Q5T3Y7 98 aa0.85□□□□□ -2.27
HMGB1P1-201ENST00000522557 SPRR2FQ96RM1 72 aa0.85□□□□□ -2.27
HMGB1P1-201ENST00000522557 MDN1Q9NU22 5596 aa0.85□□□□□ -2.27
HMGB1P1-201ENST00000522557 MUC12Q9UKN1 5478 aa0.84□□□□□ -2.27
HMGB1P1-201ENST00000522557 H0Y9P7 68 aa0.84□□□□□ -2.27
HMGB1P1-201ENST00000522557 TRBV7-4A0A0J9YYF1 115 aa0.83□□□□□ -2.28
HMGB1P1-201ENST00000522557 MT1BP07438 61 aa0.83□□□□□ -2.28
HMGB1P1-201ENST00000522557 KRTAP19-8Q3LI54 63 aa0.83□□□□□ -2.28
HMGB1P1-201ENST00000522557 KRTAP8-1Q8IUC2 63 aa0.83□□□□□ -2.28
HMGB1P1-201ENST00000522557 GPR98Q8WXG9 6306 aa0.82□□□□□ -2.28
HMGB1P1-201ENST00000522557 A0A0D9SG42 100 aa0.82□□□□□ -2.28
HMGB1P1-201ENST00000522557 SPRR2GQ9BYE4 73 aa0.82□□□□□ -2.28
HMGB1P1-201ENST00000522557 CRIPTQ9P021 101 aa0.82□□□□□ -2.28
HMGB1P1-201ENST00000522557 A0A1B0GU69 56 aa0.81□□□□□ -2.28
HMGB1P1-201ENST00000522557 SPATA8Q6RVD6 105 aa0.81□□□□□ -2.28
HMGB1P1-201ENST00000522557 NREPQ16612 68 aa0.8□□□□□ -2.28
HMGB1P1-201ENST00000522557 MRPL34Q9BQ48 92 aaKnown RBP0.8□□□□□ -2.28
HMGB1P1-201ENST00000522557 C10orf95Q9H7T3 257 aa0.8□□□□□ -2.28
HMGB1P1-201ENST00000522557 S4R3F8 94 aa0.8□□□□□ -2.28
HMGB1P1-201ENST00000522557 K7EQZ3 153 aa0.78□□□□□ -2.28
HMGB1P1-201ENST00000522557 COX8AP10176 69 aa0.76□□□□□ -2.29
HMGB1P1-201ENST00000522557 MT1XP80297 61 aa0.76□□□□□ -2.29
HMGB1P1-201ENST00000522557 ATP5EP2Q5VTU8 51 aa0.76□□□□□ -2.29
HMGB1P1-201ENST00000522557 TP53AIP1Q9HCN2 124 aa0.76□□□□□ -2.29
HMGB1P1-201ENST00000522557 DSTQ03001 7570 aaKnown RBP0.76□□□□□ -2.29
HMGB1P1-201ENST00000522557 MMP24-AS1A0A0U1RRL7 71 aa0.75□□□□□ -2.29
HMGB1P1-201ENST00000522557 MT4P47944 62 aa0.75□□□□□ -2.29
HMGB1P1-201ENST00000522557 H0YAA0 97 aa0.74□□□□□ -2.29
HMGB1P1-201ENST00000522557 ATXN8Q156A1 80 aa0.74□□□□□ -2.29
HMGB1P1-201ENST00000522557 M0QZ58 72 aa0.73□□□□□ -2.29
HMGB1P1-201ENST00000522557 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
HMGB1P1-201ENST00000522557 MT1GP13640 62 aa0.71□□□□□ -2.3
HMGB1P1-201ENST00000522557 UBL5Q9BZL1 73 aa0.7□□□□□ -2.3
HMGB1P1-201ENST00000522557 MT1EP04732 61 aa0.68□□□□□ -2.3
HMGB1P1-201ENST00000522557 AHNAKQ09666 5890 aaKnown RBP0.68□□□□□ -2.3
HMGB1P1-201ENST00000522557 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
HMGB1P1-201ENST00000522557 KRTAP19-5Q3LI72 72 aa0.66□□□□□ -2.3
HMGB1P1-201ENST00000522557 MT1MQ8N339 61 aa0.66□□□□□ -2.3
HMGB1P1-201ENST00000522557 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P1-201ENST00000522557 KRTAP20-2Q3LI61 65 aa0.65□□□□□ -2.31
HMGB1P1-201ENST00000522557 MT1LQ93083 61 aa0.64□□□□□ -2.31
HMGB1P1-201ENST00000522557 MUC5ACP98088 5654 aa0.61□□□□□ -2.31
HMGB1P1-201ENST00000522557 TNP1P09430 55 aa0.61□□□□□ -2.31
HMGB1P1-201ENST00000522557 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
HMGB1P1-201ENST00000522557 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
HMGB1P1-201ENST00000522557 MT1AP04731 61 aa0.55□□□□□ -2.32
HMGB1P1-201ENST00000522557 KRTAP6-2Q3LI66 62 aa0.55□□□□□ -2.32
HMGB1P1-201ENST00000522557 KRTAP6-1Q3LI64 71 aa0.54□□□□□ -2.32
HMGB1P1-201ENST00000522557 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
HMGB1P1-201ENST00000522557 PRM1P04553 51 aa0.39□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 63.2 ms