RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 WFDC13Q8IUB5 93 aa0.57□□□□□ -2.32
SREK1-208ENST00000520580 RPS27P42677 84 aaKnown RBP0.56□□□□□ -2.32
SREK1-208ENST00000520580 TIMM8BQ9Y5J9 83 aaPredicted RBP0.56□□□□□ -2.32
SREK1-208ENST00000520580 ATXN8Q156A1 80 aa0.55□□□□□ -2.32
SREK1-208ENST00000520580 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
SREK1-208ENST00000520580 TTTY10Q9BZA0 68 aa0.54□□□□□ -2.32
SREK1-208ENST00000520580 RPL39P5Q59GN2 51 aa0.54□□□□□ -2.32
SREK1-208ENST00000520580 TMEM167AQ8TBQ9 72 aa0.54□□□□□ -2.32
SREK1-208ENST00000520580 A0A096LNI7 61 aa0.53□□□□□ -2.32
SREK1-208ENST00000520580 C9orf92A6NGG3 77 aa0.53□□□□□ -2.32
SREK1-208ENST00000520580 KRTAP20-2Q3LI61 65 aa0.53□□□□□ -2.32
SREK1-208ENST00000520580 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
SREK1-208ENST00000520580 SFTA3P0C7M3 94 aa0.52□□□□□ -2.33
SREK1-208ENST00000520580 SMIM31A0A1B0GVY4 71 aa0.52□□□□□ -2.33
SREK1-208ENST00000520580 MT1BP07438 61 aa0.52□□□□□ -2.33
SREK1-208ENST00000520580 PRCDQ00LT1 54 aa0.5□□□□□ -2.33
SREK1-208ENST00000520580 LINC00158P58513 81 aa0.5□□□□□ -2.33
SREK1-208ENST00000520580 CLPSL2Q6UWE3 100 aa0.49□□□□□ -2.33
SREK1-208ENST00000520580 UBL5Q9BZL1 73 aa0.48□□□□□ -2.33
SREK1-208ENST00000520580 K7EIM0 57 aa0.48□□□□□ -2.33
SREK1-208ENST00000520580 C3orf79P0CE67 100 aa0.47□□□□□ -2.33
SREK1-208ENST00000520580 PRM1P04553 51 aa0.47□□□□□ -2.33
SREK1-208ENST00000520580 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
SREK1-208ENST00000520580 LINC01549A6NIU2 74 aa0.46□□□□□ -2.34
SREK1-208ENST00000520580 A8MTW9 85 aa0.46□□□□□ -2.34
SREK1-208ENST00000520580 H0YAA0 97 aa0.46□□□□□ -2.34
SREK1-208ENST00000520580 WT1-ASQ06250 92 aa0.46□□□□□ -2.34
SREK1-208ENST00000520580 S100ZQ8WXG8 99 aa0.46□□□□□ -2.34
SREK1-208ENST00000520580 KCNQ1DNQ9H478 68 aa0.46□□□□□ -2.34
SREK1-208ENST00000520580 CRIP1P50238 77 aa0.45□□□□□ -2.34
SREK1-208ENST00000520580 SNRPGP62308 76 aaKnown RBP0.45□□□□□ -2.34
SREK1-208ENST00000520580 ABRACLQ9P1F3 81 aa0.45□□□□□ -2.34
SREK1-208ENST00000520580 A0A087WWC5 75 aa0.44□□□□□ -2.34
SREK1-208ENST00000520580 LINC01590Q5TEZ4 76 aa0.44□□□□□ -2.34
SREK1-208ENST00000520580 KRTAP19-8Q3LI54 63 aa0.43□□□□□ -2.34
SREK1-208ENST00000520580 ETDCA0A1B0GVM5 59 aa0.42□□□□□ -2.34
SREK1-208ENST00000520580 MT1XP80297 61 aa0.41□□□□□ -2.34
SREK1-208ENST00000520580 ARHGAP5-AS1Q96IT6 56 aa0.41□□□□□ -2.34
SREK1-208ENST00000520580 PRLHP81277 87 aa0.4□□□□□ -2.35
SREK1-208ENST00000520580 MT1MQ8N339 61 aa0.39□□□□□ -2.35
SREK1-208ENST00000520580 SPRR2GQ9BYE4 73 aa0.39□□□□□ -2.35
SREK1-208ENST00000520580 MT1EP04732 61 aa0.38□□□□□ -2.35
SREK1-208ENST00000520580 IAPPP10997 89 aa0.38□□□□□ -2.35
SREK1-208ENST00000520580 MT1GP13640 62 aa0.38□□□□□ -2.35
SREK1-208ENST00000520580 RPS29P62273 56 aaKnown RBP0.38□□□□□ -2.35
SREK1-208ENST00000520580 CMC2Q9NRP2 79 aa0.38□□□□□ -2.35
SREK1-208ENST00000520580 SNRPGP15A8MWD9 76 aa0.38□□□□□ -2.35
SREK1-208ENST00000520580 KRTAP19-7Q3SYF9 63 aa0.37□□□□□ -2.35
SREK1-208ENST00000520580 FCER1GP30273 86 aa0.35□□□□□ -2.35
SREK1-208ENST00000520580 K7EMI3 77 aa0.35□□□□□ -2.35
SREK1-208ENST00000520580 KRTAP6-2Q3LI66 62 aa0.34□□□□□ -2.35
SREK1-208ENST00000520580 C6orf48Q9UBA6 75 aa0.34□□□□□ -2.35
SREK1-208ENST00000520580 NDUFA1O15239 70 aa0.33□□□□□ -2.36
SREK1-208ENST00000520580 MT1LQ93083 61 aa0.31□□□□□ -2.36
SREK1-208ENST00000520580 KRTAP19-5Q3LI72 72 aa0.31□□□□□ -2.36
SREK1-208ENST00000520580 KRTAP6-1Q3LI64 71 aa0.3□□□□□ -2.36
SREK1-208ENST00000520580 NMES1Q9C002 83 aa0.3□□□□□ -2.36
SREK1-208ENST00000520580 TOMM7Q9P0U1 55 aa0.28□□□□□ -2.36
SREK1-208ENST00000520580 M0QY20 66 aa0.26□□□□□ -2.37
SREK1-208ENST00000520580 MT1AP04731 61 aa0.25□□□□□ -2.37
SREK1-208ENST00000520580 RPL39LQ96EH5 51 aaKnown RBP0.23□□□□□ -2.37
SREK1-208ENST00000520580 S4R3F8 94 aa0.22□□□□□ -2.37
SREK1-208ENST00000520580 SERF2P84101 59 aa0.21□□□□□ -2.38
SREK1-208ENST00000520580 RPL39P62891 51 aaKnown RBP0.2□□□□□ -2.38
SREK1-208ENST00000520580 IGIPA6NJ69 53 aa0.19□□□□□ -2.38
SREK1-208ENST00000520580 M0QZ58 72 aa0.19□□□□□ -2.38
SREK1-208ENST00000520580 SMIM2Q9BVW6 85 aa0.18□□□□□ -2.38
SREK1-208ENST00000520580 POLR2KP53803 58 aaKnown RBP0.17□□□□□ -2.38
SREK1-208ENST00000520580 IGLV5-48A0A075B6I7 105 aa0.14□□□□□ -2.39
SREK1-208ENST00000520580 LINC00308Q8TCZ7 52 aa0.14□□□□□ -2.39
SREK1-208ENST00000520580 LINC01546A6NGU7 62 aa0.11□□□□□ -2.39
SREK1-208ENST00000520580 TMEM167BQ9NRX6 74 aa0.11□□□□□ -2.39
SREK1-208ENST00000520580 H0YGX0 51 aa0.09□□□□□ -2.4
SREK1-208ENST00000520580 PLNP26678 52 aa0.06□□□□□ -2.4
SREK1-208ENST00000520580 SMIM27A0A1W2PRY6 76 aa0.03□□□□□ -2.4
SREK1-208ENST00000520580 TNP1P09430 55 aa0.03□□□□□ -2.41
SREK1-208ENST00000520580 TOMM5Q8N4H5 51 aa0.02□□□□□ -2.41
SREK1-208ENST00000520580 MMP24-AS1A0A0U1RRL7 71 aa0.01□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 112 ms