RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 H7BZZ5 65 aa1.51□□□□□ -2.17
HMGB1P23-201ENST00000518743 NDUFC1O43677 76 aa1.51□□□□□ -2.17
HMGB1P23-201ENST00000518743 COX6CP09669 75 aa1.51□□□□□ -2.17
HMGB1P23-201ENST00000518743 SPINK7P58062 85 aa1.51□□□□□ -2.17
HMGB1P23-201ENST00000518743 H1FX-AS1Q4G0G2 97 aa1.51□□□□□ -2.17
HMGB1P23-201ENST00000518743 Q6JHZ5 121 aa1.51□□□□□ -2.17
HMGB1P23-201ENST00000518743 DEFB105AQ8NG35 78 aa1.51□□□□□ -2.17
HMGB1P23-201ENST00000518743 TMEM141Q96I45 108 aa1.51□□□□□ -2.17
HMGB1P23-201ENST00000518743 DSCR8Q96T75 97 aa1.51□□□□□ -2.17
HMGB1P23-201ENST00000518743 CDKN2A-AS1Q9UH64 79 aa1.51□□□□□ -2.17
HMGB1P23-201ENST00000518743 CCKP06307 115 aa1.5□□□□□ -2.17
HMGB1P23-201ENST00000518743 ATP5EP56381 51 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P23-201ENST00000518743 NPC2P61916 151 aa1.5□□□□□ -2.17
HMGB1P23-201ENST00000518743 MUSTN1Q8IVN3 82 aa1.5□□□□□ -2.17
HMGB1P23-201ENST00000518743 PLAC4Q8WY50 150 aa1.5□□□□□ -2.17
HMGB1P23-201ENST00000518743 TRAV13-2A0A0B4J235 113 aa1.49□□□□□ -2.17
HMGB1P23-201ENST00000518743 ZNF815PA8K554 130 aa1.49□□□□□ -2.17
HMGB1P23-201ENST00000518743 PPP1R17O96001 155 aa1.49□□□□□ -2.17
HMGB1P23-201ENST00000518743 SPRR1BP22528 89 aa1.48□□□□□ -2.17
HMGB1P23-201ENST00000518743 ATP5EP2Q5VTU8 51 aa1.48□□□□□ -2.17
HMGB1P23-201ENST00000518743 LINC00158P58513 81 aa1.47□□□□□ -2.17
HMGB1P23-201ENST00000518743 S100A7L2Q5SY68 101 aa1.47□□□□□ -2.17
HMGB1P23-201ENST00000518743 SMIM2Q9BVW6 85 aa1.47□□□□□ -2.17
HMGB1P23-201ENST00000518743 H0YGX0 51 aa1.46□□□□□ -2.18
HMGB1P23-201ENST00000518743 COX17Q14061 63 aa1.46□□□□□ -2.18
HMGB1P23-201ENST00000518743 SFTA2Q6UW10 78 aa1.46□□□□□ -2.18
HMGB1P23-201ENST00000518743 C20orf197Q8N268 126 aa1.45□□□□□ -2.18
HMGB1P23-201ENST00000518743 TRBV7-4A0A0J9YYF1 115 aa1.44□□□□□ -2.18
HMGB1P23-201ENST00000518743 LINC00308Q8TCZ7 52 aa1.44□□□□□ -2.18
HMGB1P23-201ENST00000518743 CYP4F30PQ9H0H9 118 aa1.44□□□□□ -2.18
HMGB1P23-201ENST00000518743 A0A087WVE0 104 aa1.43□□□□□ -2.18
HMGB1P23-201ENST00000518743 F8WEM9 126 aa1.43□□□□□ -2.18
HMGB1P23-201ENST00000518743 MT1EP04732 61 aa1.43□□□□□ -2.18
HMGB1P23-201ENST00000518743 MT1GP13640 62 aa1.43□□□□□ -2.18
HMGB1P23-201ENST00000518743 CRIPTQ9P021 101 aa1.43□□□□□ -2.18
HMGB1P23-201ENST00000518743 LOC101927531A0A1B0GV80 90 aa1.42□□□□□ -2.18
HMGB1P23-201ENST00000518743 TRAV22A0A0B4J277 110 aa1.41□□□□□ -2.18
HMGB1P23-201ENST00000518743 ELOF1P60002 83 aaKnown RBP1.41□□□□□ -2.18
HMGB1P23-201ENST00000518743 MT1MQ8N339 61 aa1.41□□□□□ -2.18
HMGB1P23-201ENST00000518743 UBL5Q9BZL1 73 aa1.41□□□□□ -2.18
HMGB1P23-201ENST00000518743 KRTAP19-7Q3SYF9 63 aa1.39□□□□□ -2.19
HMGB1P23-201ENST00000518743 SMIM11BQ8TCY0 68 aa1.39□□□□□ -2.19
HMGB1P23-201ENST00000518743 NREPQ16612 68 aa1.38□□□□□ -2.19
HMGB1P23-201ENST00000518743 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
HMGB1P23-201ENST00000518743 LINC00208Q96KT6 92 aa1.38□□□□□ -2.19
HMGB1P23-201ENST00000518743 HCG22E2RYF7 251 aa1.37□□□□□ -2.19
HMGB1P23-201ENST00000518743 NDUFB1O75438 58 aa1.37□□□□□ -2.19
HMGB1P23-201ENST00000518743 LINC01558Q9Y6Z2 57 aa1.37□□□□□ -2.19
HMGB1P23-201ENST00000518743 S4R3F8 94 aa1.35□□□□□ -2.19
HMGB1P23-201ENST00000518743 CHKB-CPT1BH3BT56 60 aa1.34□□□□□ -2.19
HMGB1P23-201ENST00000518743 COX7BP24311 80 aa1.34□□□□□ -2.19
HMGB1P23-201ENST00000518743 IGLV5-48A0A075B6I7 105 aa1.33□□□□□ -2.2
HMGB1P23-201ENST00000518743 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
HMGB1P23-201ENST00000518743 SPATA8Q6RVD6 105 aa1.32□□□□□ -2.2
HMGB1P23-201ENST00000518743 SPTSSBQ8NFR3 76 aa1.3□□□□□ -2.2
HMGB1P23-201ENST00000518743 PRR15LQ9BU68 103 aa1.29□□□□□ -2.2
HMGB1P23-201ENST00000518743 MT1LQ93083 61 aa1.28□□□□□ -2.2
HMGB1P23-201ENST00000518743 KRTAP19-5Q3LI72 72 aa1.27□□□□□ -2.21
HMGB1P23-201ENST00000518743 TP53AIP1Q9HCN2 124 aa1.26□□□□□ -2.21
HMGB1P23-201ENST00000518743 H0Y9P7 68 aa1.25□□□□□ -2.21
HMGB1P23-201ENST00000518743 K7EQZ3 153 aa1.25□□□□□ -2.21
HMGB1P23-201ENST00000518743 C10orf95Q9H7T3 257 aa1.24□□□□□ -2.21
HMGB1P23-201ENST00000518743 LINC00472Q9H8W2 130 aa1.24□□□□□ -2.21
HMGB1P23-201ENST00000518743 UQCR11O14957 56 aa1.23□□□□□ -2.21
HMGB1P23-201ENST00000518743 ACYP2P14621 99 aa1.23□□□□□ -2.21
HMGB1P23-201ENST00000518743 MMP24-AS1A0A0U1RRL7 71 aa1.2□□□□□ -2.22
HMGB1P23-201ENST00000518743 M0QZ58 72 aa1.2□□□□□ -2.22
HMGB1P23-201ENST00000518743 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
HMGB1P23-201ENST00000518743 A0A1B0GU69 56 aa1.19□□□□□ -2.22
HMGB1P23-201ENST00000518743 MRPL34Q9BQ48 92 aaKnown RBP1.17□□□□□ -2.22
HMGB1P23-201ENST00000518743 A0A0D9SG42 100 aa1.16□□□□□ -2.22
HMGB1P23-201ENST00000518743 KRTAP6-1Q3LI64 71 aa1.11□□□□□ -2.23
HMGB1P23-201ENST00000518743 MT1AP04731 61 aa1.07□□□□□ -2.24
HMGB1P23-201ENST00000518743 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
HMGB1P23-201ENST00000518743 TNP1P09430 55 aa0.84□□□□□ -2.27
HMGB1P23-201ENST00000518743 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.3
HMGB1P23-201ENST00000518743 PRM1P04553 51 aa0.57□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 104.9 ms