RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	SPATA45	Q537H7	98 aa		0.37	□□□□□ -2.35
LINC01088-208	ENST00000511895	CYP4F30P	Q9H0H9	118 aa		0.37	□□□□□ -2.35
LINC01088-208	ENST00000511895	KANTR	A0A1W2PQU2	76 aa		0.36	□□□□□ -2.35
LINC01088-208	ENST00000511895	S100P	P25815	95 aa		0.36	□□□□□ -2.35
LINC01088-208	ENST00000511895	CASC2	Q6XLA1	102 aa		0.36	□□□□□ -2.35
LINC01088-208	ENST00000511895	ATOH7	Q8N100	152 aa		0.35	□□□□□ -2.35
LINC01088-208	ENST00000511895	DPM2	O94777	84 aa		0.34	□□□□□ -2.36
LINC01088-208	ENST00000511895	MIR22HG	Q0VDD5	57 aa		0.34	□□□□□ -2.36
LINC01088-208	ENST00000511895	IGKC	P01834	107 aa		0.33	□□□□□ -2.36
LINC01088-208	ENST00000511895	FABP4	P15090	132 aa		0.32	□□□□□ -2.36
LINC01088-208	ENST00000511895	HIGD1B	Q9P298	99 aa		0.32	□□□□□ -2.36
LINC01088-208	ENST00000511895	TRAV22	A0A0B4J277	110 aa		0.31	□□□□□ -2.36
LINC01088-208	ENST00000511895		A0A1B0GX51	115 aa		0.31	□□□□□ -2.36
LINC01088-208	ENST00000511895		H0YGX0	51 aa		0.31	□□□□□ -2.36
LINC01088-208	ENST00000511895	C18orf32	Q8TCD1	76 aa		0.31	□□□□□ -2.36
LINC01088-208	ENST00000511895	SEC11C	Q9BY50	192 aa		0.31	□□□□□ -2.36
LINC01088-208	ENST00000511895	PMCHL2	Q9BQD1	86 aa		0.3	□□□□□ -2.36
LINC01088-208	ENST00000511895	NREP	Q16612	68 aa		0.28	□□□□□ -2.36
LINC01088-208	ENST00000511895	LOC101927531	A0A1B0GV80	90 aa		0.27	□□□□□ -2.37
LINC01088-208	ENST00000511895		C9JAW5	83 aa		0.27	□□□□□ -2.37
LINC01088-208	ENST00000511895	TP53AIP1	Q9HCN2	124 aa		0.27	□□□□□ -2.37
LINC01088-208	ENST00000511895	LEPROTL1	O95214	131 aa		0.26	□□□□□ -2.37
LINC01088-208	ENST00000511895	MT-ND4L	P03901	98 aa		0.26	□□□□□ -2.37
LINC01088-208	ENST00000511895	RPS28	P62857	69 aa	Known RBP	0.22	□□□□□ -2.37
LINC01088-208	ENST00000511895	UQCRQ	O14949	82 aa		0.21	□□□□□ -2.38
LINC01088-208	ENST00000511895	BRK1	Q8WUW1	75 aa		0.2	□□□□□ -2.38
LINC01088-208	ENST00000511895	DMAC1	Q96GE9	116 aa		0.2	□□□□□ -2.38
LINC01088-208	ENST00000511895	SMIM6	P0DI80	62 aa		0.19	□□□□□ -2.38
LINC01088-208	ENST00000511895	PEA15	Q15121	130 aa		0.19	□□□□□ -2.38
LINC01088-208	ENST00000511895	LINC00208	Q96KT6	92 aa		0.19	□□□□□ -2.38
LINC01088-208	ENST00000511895	TSTD3	H0UI37	97 aa		0.18	□□□□□ -2.38
LINC01088-208	ENST00000511895	ACYP2	P14621	99 aa		0.17	□□□□□ -2.38
LINC01088-208	ENST00000511895	KRTDAP	P60985	99 aa		0.17	□□□□□ -2.38
LINC01088-208	ENST00000511895	PRR15L	Q9BU68	103 aa		0.16	□□□□□ -2.38
LINC01088-208	ENST00000511895	LINC01545	Q5VT33	79 aa		0.15	□□□□□ -2.39
LINC01088-208	ENST00000511895		J3QR89	54 aa		0.14	□□□□□ -2.39
LINC01088-208	ENST00000511895	CCDC179	H3BU77	68 aa		0.13	□□□□□ -2.39
LINC01088-208	ENST00000511895	SCGB1A1	P11684	91 aa		0.13	□□□□□ -2.39
LINC01088-208	ENST00000511895	SPTSSB	Q8NFR3	76 aa		0.13	□□□□□ -2.39
LINC01088-208	ENST00000511895	SPCS1	Q9Y6A9	102 aa		0.12	□□□□□ -2.39
LINC01088-208	ENST00000511895	SYS1-DBNDD2	H3BUS1	97 aa		0.11	□□□□□ -2.39
LINC01088-208	ENST00000511895	ATOX1	O00244	68 aa		0.1	□□□□□ -2.39
LINC01088-208	ENST00000511895	APOC3	P02656	99 aa		0.09	□□□□□ -2.4
LINC01088-208	ENST00000511895	COX8A	P10176	69 aa		0.09	□□□□□ -2.4
LINC01088-208	ENST00000511895		H0Y9P7	68 aa		0.08	□□□□□ -2.4
LINC01088-208	ENST00000511895	VAMP8	Q9BV40	100 aa		0.07	□□□□□ -2.4
LINC01088-208	ENST00000511895	CLLU1	Q5K131	121 aa		0.06	□□□□□ -2.4
LINC01088-208	ENST00000511895	UQCR10	Q9UDW1	63 aa		0.06	□□□□□ -2.4
LINC01088-208	ENST00000511895	PRO1854	Q9UHT4	67 aa		0.06	□□□□□ -2.4
LINC01088-208	ENST00000511895		K7ERU9	68 aa		0.05	□□□□□ -2.4
LINC01088-208	ENST00000511895	UQCR11	O14957	56 aa		0.05	□□□□□ -2.4
LINC01088-208	ENST00000511895		H7BZZ5	65 aa		0.04	□□□□□ -2.4
LINC01088-208	ENST00000511895	COX6C	P09669	75 aa		0.04	□□□□□ -2.4
LINC01088-208	ENST00000511895	ATP5E	P56381	51 aa	Predicted RBP	0.02	□□□□□ -2.41
LINC01088-208	ENST00000511895	S100A1	P23297	94 aa		0.01	□□□□□ -2.41
LINC01088-208	ENST00000511895	SVBP	Q8N300	66 aa		0.01	□□□□□ -2.41
LINC01088-208	ENST00000511895	LINC01558	Q9Y6Z2	57 aa		0.01	□□□□□ -2.41
LINC01088-208	ENST00000511895	SERP1	Q9Y6X1	66 aa		0	□□□□□ -2.41
LINC01088-208	ENST00000511895	TMEM218	A2RU14	115 aa		-0.01	□□□□□ -2.41
LINC01088-208	ENST00000511895	CHKB-CPT1B	H3BT56	60 aa		-0.01	□□□□□ -2.41
LINC01088-208	ENST00000511895	GTF2H5	Q6ZYL4	71 aa		-0.01	□□□□□ -2.41
LINC01088-208	ENST00000511895		A0A1B0GU69	56 aa		-0.03	□□□□□ -2.41
LINC01088-208	ENST00000511895	SERP2	Q8N6R1	65 aa		-0.04	□□□□□ -2.42
LINC01088-208	ENST00000511895	LOC105371267	A0A1B0GV96	52 aa		-0.05	□□□□□ -2.42
LINC01088-208	ENST00000511895	ATXN8	Q156A1	80 aa		-0.05	□□□□□ -2.42
LINC01088-208	ENST00000511895	ETDB	Q3ZM63	59 aa		-0.06	□□□□□ -2.42
LINC01088-208	ENST00000511895	COL5A1-AS1	Q5SY13	56 aa		-0.06	□□□□□ -2.42
LINC01088-208	ENST00000511895	PRM1	P04553	51 aa		-0.07	□□□□□ -2.42
LINC01088-208	ENST00000511895	UBL5	Q9BZL1	73 aa		-0.07	□□□□□ -2.42
LINC01088-208	ENST00000511895	HSD52	Q0P140	79 aa		-0.09	□□□□□ -2.42
LINC01088-208	ENST00000511895	PYY3	Q5JQD4	70 aa		-0.09	□□□□□ -2.42
LINC01088-208	ENST00000511895	DLEU1	O43261	78 aa		-0.1	□□□□□ -2.43
LINC01088-208	ENST00000511895		M0R143	59 aa		-0.11	□□□□□ -2.43
LINC01088-208	ENST00000511895	LINC00643	Q86TS7	51 aa		-0.11	□□□□□ -2.43
LINC01088-208	ENST00000511895		A0A1B0GV90	55 aa		-0.12	□□□□□ -2.43
LINC01088-208	ENST00000511895	ATP5EP2	Q5VTU8	51 aa		-0.12	□□□□□ -2.43
LINC01088-208	ENST00000511895	C14orf144	Q96I85	54 aa		-0.18	□□□□□ -2.44

Retrieved 77 of 20,778 RNA–protein pairs in 78.9 ms