RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TOMM5Q8N4H5 51 aa0.98□□□□□ -2.25
TOPBP1-208ENST00000511439 SMIM11BQ8TCY0 68 aa0.98□□□□□ -2.25
TOPBP1-208ENST00000511439 SMIM2Q9BVW6 85 aa0.98□□□□□ -2.25
TOPBP1-208ENST00000511439 NXT2Q9NPJ8 142 aaKnown RBP0.98□□□□□ -2.25
TOPBP1-208ENST00000511439 CTXND1A0A1B0GTU2 59 aa0.97□□□□□ -2.25
TOPBP1-208ENST00000511439 UQCR11O14957 56 aa0.97□□□□□ -2.25
TOPBP1-208ENST00000511439 APOC3P02656 99 aa0.97□□□□□ -2.25
TOPBP1-208ENST00000511439 SERF2P84101 59 aa0.97□□□□□ -2.25
TOPBP1-208ENST00000511439 SERP2Q8N6R1 65 aa0.97□□□□□ -2.25
TOPBP1-208ENST00000511439 C3orf79P0CE67 100 aa0.96□□□□□ -2.26
TOPBP1-208ENST00000511439 Q6JHZ5 121 aa0.96□□□□□ -2.26
TOPBP1-208ENST00000511439 S4R3F8 94 aa0.95□□□□□ -2.26
TOPBP1-208ENST00000511439 IGLV5-48A0A075B6I7 105 aa0.94□□□□□ -2.26
TOPBP1-208ENST00000511439 A0A1B0GUT8 65 aa0.94□□□□□ -2.26
TOPBP1-208ENST00000511439 MT1LQ93083 61 aa0.94□□□□□ -2.26
TOPBP1-208ENST00000511439 LINC01558Q9Y6Z2 57 aa0.94□□□□□ -2.26
TOPBP1-208ENST00000511439 IGIPA6NJ69 53 aa0.93□□□□□ -2.26
TOPBP1-208ENST00000511439 SYS1-DBNDD2H3BUS1 97 aa0.93□□□□□ -2.26
TOPBP1-208ENST00000511439 H7BZZ5 65 aa0.93□□□□□ -2.26
TOPBP1-208ENST00000511439 K7EQZ3 153 aa0.93□□□□□ -2.26
TOPBP1-208ENST00000511439 PRR15LQ9BU68 103 aa0.93□□□□□ -2.26
TOPBP1-208ENST00000511439 SMIM13P0DJ93 91 aa0.92□□□□□ -2.26
TOPBP1-208ENST00000511439 PMCHL1Q16048 86 aa0.92□□□□□ -2.26
TOPBP1-208ENST00000511439 PYY3Q5JQD4 70 aa0.92□□□□□ -2.26
TOPBP1-208ENST00000511439 COX7BP24311 80 aa0.91□□□□□ -2.26
TOPBP1-208ENST00000511439 KRTAP19-5Q3LI72 72 aa0.9□□□□□ -2.27
TOPBP1-208ENST00000511439 K7EP34 96 aa0.89□□□□□ -2.27
TOPBP1-208ENST00000511439 K7EMI3 77 aa0.88□□□□□ -2.27
TOPBP1-208ENST00000511439 KRTAP6-2Q3LI66 62 aa0.88□□□□□ -2.27
TOPBP1-208ENST00000511439 C10orf95Q9H7T3 257 aa0.88□□□□□ -2.27
TOPBP1-208ENST00000511439 IGLC3P0DOY3 106 aa0.87□□□□□ -2.27
TOPBP1-208ENST00000511439 ETDBQ3ZM63 59 aa0.86□□□□□ -2.27
TOPBP1-208ENST00000511439 LINC00472Q9H8W2 130 aa0.86□□□□□ -2.27
TOPBP1-208ENST00000511439 PEA15Q15121 130 aa0.85□□□□□ -2.27
TOPBP1-208ENST00000511439 GNG13Q9P2W3 67 aa0.85□□□□□ -2.27
TOPBP1-208ENST00000511439 A0A0D9SG42 100 aa0.84□□□□□ -2.27
TOPBP1-208ENST00000511439 LINC01549A6NIU2 74 aa0.84□□□□□ -2.27
TOPBP1-208ENST00000511439 HIGD1BQ9P298 99 aa0.84□□□□□ -2.27
TOPBP1-208ENST00000511439 MYMXA0A1B0GTQ4 84 aa0.83□□□□□ -2.28
TOPBP1-208ENST00000511439 H3BUT2 72 aa0.83□□□□□ -2.28
TOPBP1-208ENST00000511439 M0QZ58 72 aa0.82□□□□□ -2.28
TOPBP1-208ENST00000511439 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
TOPBP1-208ENST00000511439 A0A087WVE0 104 aa0.81□□□□□ -2.28
TOPBP1-208ENST00000511439 UMAD1C9J7I0 102 aa0.81□□□□□ -2.28
TOPBP1-208ENST00000511439 MT1AP04731 61 aa0.81□□□□□ -2.28
TOPBP1-208ENST00000511439 KRTAP6-1Q3LI64 71 aa0.81□□□□□ -2.28
TOPBP1-208ENST00000511439 KANTRA0A1W2PQU2 76 aa0.8□□□□□ -2.28
TOPBP1-208ENST00000511439 H0Y9P7 68 aa0.8□□□□□ -2.28
TOPBP1-208ENST00000511439 LEPROTL1O95214 131 aa0.8□□□□□ -2.28
TOPBP1-208ENST00000511439 ACYP1P07311 99 aa0.8□□□□□ -2.28
TOPBP1-208ENST00000511439 LINC00643Q86TS7 51 aa0.8□□□□□ -2.28
TOPBP1-208ENST00000511439 MUSTN1Q8IVN3 82 aa0.8□□□□□ -2.28
TOPBP1-208ENST00000511439 ADIRFQ15847 76 aa0.79□□□□□ -2.28
TOPBP1-208ENST00000511439 SPATA8Q6RVD6 105 aa0.79□□□□□ -2.28
TOPBP1-208ENST00000511439 SPCS1Q9Y6A9 102 aa0.79□□□□□ -2.28
TOPBP1-208ENST00000511439 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
TOPBP1-208ENST00000511439 SMIM27A0A1W2PRY6 76 aa0.77□□□□□ -2.29
TOPBP1-208ENST00000511439 TRBV7-4A0A0J9YYF1 115 aa0.76□□□□□ -2.29
TOPBP1-208ENST00000511439 A0A1B0GU69 56 aa0.75□□□□□ -2.29
TOPBP1-208ENST00000511439 LINC01546A6NGU7 62 aa0.75□□□□□ -2.29
TOPBP1-208ENST00000511439 NDUFB1O75438 58 aa0.75□□□□□ -2.29
TOPBP1-208ENST00000511439 TP53AIP1Q9HCN2 124 aa0.75□□□□□ -2.29
TOPBP1-208ENST00000511439 LINC00308Q8TCZ7 52 aa0.74□□□□□ -2.29
TOPBP1-208ENST00000511439 MRPL34Q9BQ48 92 aaKnown RBP0.72□□□□□ -2.29
TOPBP1-208ENST00000511439 SMCO4Q9NRQ5 59 aa0.72□□□□□ -2.29
TOPBP1-208ENST00000511439 BVES-AS1Q5T3Y7 98 aa0.71□□□□□ -2.3
TOPBP1-208ENST00000511439 ATP5EP2Q5VTU8 51 aa0.7□□□□□ -2.3
TOPBP1-208ENST00000511439 C18orf32Q8TCD1 76 aa0.68□□□□□ -2.3
TOPBP1-208ENST00000511439 MMP24-AS1A0A0U1RRL7 71 aa0.66□□□□□ -2.3
TOPBP1-208ENST00000511439 COX8AP10176 69 aa0.66□□□□□ -2.3
TOPBP1-208ENST00000511439 PLNP26678 52 aa0.65□□□□□ -2.31
TOPBP1-208ENST00000511439 S100ZQ8WXG8 99 aa0.65□□□□□ -2.31
TOPBP1-208ENST00000511439 NREPQ16612 68 aa0.57□□□□□ -2.32
TOPBP1-208ENST00000511439 H0YGX0 51 aa0.55□□□□□ -2.32
TOPBP1-208ENST00000511439 TNP1P09430 55 aa0.54□□□□□ -2.32
TOPBP1-208ENST00000511439 ATXN8Q156A1 80 aa0.5□□□□□ -2.33
TOPBP1-208ENST00000511439 UBL5Q9BZL1 73 aa0.47□□□□□ -2.33
TOPBP1-208ENST00000511439 PRM1P04553 51 aa0.33□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 185.5 ms