RNA–Protein interactions for RNA: ENST00000505143.5

CAST-215, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-215ENST00000505143 TOMM7Q9P0U1 55 aa1.7□□□□□ -2.14
CAST-215ENST00000505143 SYNE2Q8WXH0 6885 aaKnown RBP1.7□□□□□ -2.14
CAST-215ENST00000505143 RPL39P62891 51 aaKnown RBP1.69□□□□□ -2.14
CAST-215ENST00000505143 KRTAP19-2Q3LHN2 52 aa1.69□□□□□ -2.14
CAST-215ENST00000505143 COX6B2Q6YFQ2 88 aa1.69□□□□□ -2.14
CAST-215ENST00000505143 Q8IZM0 81 aa1.69□□□□□ -2.14
CAST-215ENST00000505143 RPS29P62273 56 aaKnown RBP1.68□□□□□ -2.14
CAST-215ENST00000505143 SMIM2Q9BVW6 85 aa1.68□□□□□ -2.14
CAST-215ENST00000505143 USH2AO75445 5202 aa1.67□□□□□ -2.14
CAST-215ENST00000505143 SSPOA2VEC9 5147 aa1.66□□□□□ -2.14
CAST-215ENST00000505143 C10orf95Q9H7T3 257 aa1.66□□□□□ -2.14
CAST-215ENST00000505143 MACF1Q9UPN3 7388 aaKnown RBP1.66□□□□□ -2.14
CAST-215ENST00000505143 CDKN2A-AS1Q9UH64 79 aa1.65□□□□□ -2.15
CAST-215ENST00000505143 C9orf92A6NGG3 77 aa1.64□□□□□ -2.15
CAST-215ENST00000505143 FLGP20930 4061 aaPredicted RBP1.64□□□□□ -2.15
CAST-215ENST00000505143 TP53AIP1Q9HCN2 124 aa1.63□□□□□ -2.15
CAST-215ENST00000505143 SPRR1AP35321 89 aa1.61□□□□□ -2.15
CAST-215ENST00000505143 LINC00158P58513 81 aa1.6□□□□□ -2.15
CAST-215ENST00000505143 NEBP20929 6669 aa1.6□□□□□ -2.15
CAST-215ENST00000505143 A0A0D9SG42 100 aa1.59□□□□□ -2.15
CAST-215ENST00000505143 K7EQZ3 153 aa1.57□□□□□ -2.16
CAST-215ENST00000505143 MT2AP02795 61 aa1.57□□□□□ -2.16
CAST-215ENST00000505143 LINC00308Q8TCZ7 52 aa1.57□□□□□ -2.16
CAST-215ENST00000505143 CRIPTQ9P021 101 aa1.57□□□□□ -2.16
CAST-215ENST00000505143 KRTAP19-6Q3LI70 58 aa1.56□□□□□ -2.16
CAST-215ENST00000505143 MT1FP04733 61 aa1.55□□□□□ -2.16
CAST-215ENST00000505143 SPRR1BP22528 89 aa1.55□□□□□ -2.16
CAST-215ENST00000505143 KRTAP20-1Q3LI63 56 aa1.55□□□□□ -2.16
CAST-215ENST00000505143 DEFB105AQ8NG35 78 aa1.53□□□□□ -2.16
CAST-215ENST00000505143 MRPL34Q9BQ48 92 aaKnown RBP1.53□□□□□ -2.16
CAST-215ENST00000505143 MUC12Q9UKN1 5478 aa1.52□□□□□ -2.17
CAST-215ENST00000505143 IGLV5-48A0A075B6I7 105 aa1.5□□□□□ -2.17
CAST-215ENST00000505143 MDN1Q9NU22 5596 aa1.49□□□□□ -2.17
CAST-215ENST00000505143 H0YAA0 97 aa1.47□□□□□ -2.17
CAST-215ENST00000505143 KRTAP2-3P0C7H8 128 aa1.47□□□□□ -2.17
CAST-215ENST00000505143 KRTAP2-4Q9BYR9 128 aa1.47□□□□□ -2.17
CAST-215ENST00000505143 KMT2DO14686 5537 aa1.46□□□□□ -2.18
CAST-215ENST00000505143 WFDC13Q8IUB5 93 aa1.41□□□□□ -2.18
CAST-215ENST00000505143 KRTAP2-1Q9BYU5 128 aa1.41□□□□□ -2.18
CAST-215ENST00000505143 SPRR2EP22531 72 aa1.4□□□□□ -2.19
CAST-215ENST00000505143 SPRR2BP35325 72 aa1.4□□□□□ -2.19
CAST-215ENST00000505143 SPRR2AP35326 72 aa1.4□□□□□ -2.19
CAST-215ENST00000505143 GPR98Q8WXG9 6306 aa1.4□□□□□ -2.19
CAST-215ENST00000505143 H1FX-AS1Q4G0G2 97 aa1.39□□□□□ -2.19
CAST-215ENST00000505143 SPRR2FQ96RM1 72 aa1.38□□□□□ -2.19
CAST-215ENST00000505143 MT1BP07438 61 aa1.37□□□□□ -2.19
CAST-215ENST00000505143 SPRR2DP22532 72 aa1.36□□□□□ -2.19
CAST-215ENST00000505143 KRTAP19-8Q3LI54 63 aa1.36□□□□□ -2.19
CAST-215ENST00000505143 SPRR2GQ9BYE4 73 aa1.36□□□□□ -2.19
CAST-215ENST00000505143 KRTAP8-1Q8IUC2 63 aa1.34□□□□□ -2.19
CAST-215ENST00000505143 MMP24-AS1A0A0U1RRL7 71 aa1.33□□□□□ -2.2
CAST-215ENST00000505143 S4R3F8 94 aa1.31□□□□□ -2.2
CAST-215ENST00000505143 DSTQ03001 7570 aaKnown RBP1.31□□□□□ -2.2
CAST-215ENST00000505143 MT1XP80297 61 aa1.26□□□□□ -2.21
CAST-215ENST00000505143 AHNAK2Q8IVF2 5795 aa1.24□□□□□ -2.21
CAST-215ENST00000505143 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
CAST-215ENST00000505143 MT4P47944 62 aa1.19□□□□□ -2.22
CAST-215ENST00000505143 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
CAST-215ENST00000505143 M0QZ58 72 aa1.17□□□□□ -2.22
CAST-215ENST00000505143 KRTAP19-3Q7Z4W3 81 aa1.16□□□□□ -2.22
CAST-215ENST00000505143 MT1EP04732 61 aa1.13□□□□□ -2.23
CAST-215ENST00000505143 KRTAP19-7Q3SYF9 63 aa1.13□□□□□ -2.23
CAST-215ENST00000505143 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
CAST-215ENST00000505143 MT1GP13640 62 aa1.11□□□□□ -2.23
CAST-215ENST00000505143 MT1MQ8N339 61 aa1.09□□□□□ -2.23
CAST-215ENST00000505143 MUC5ACP98088 5654 aa1.08□□□□□ -2.24
CAST-215ENST00000505143 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
CAST-215ENST00000505143 KRTAP19-5Q3LI72 72 aa1.07□□□□□ -2.24
CAST-215ENST00000505143 MUC5BQ9HC84 5762 aaPredicted RBP1.06□□□□□ -2.24
CAST-215ENST00000505143 MT1LQ93083 61 aa1.05□□□□□ -2.24
CAST-215ENST00000505143 TNP1P09430 55 aa0.99□□□□□ -2.25
CAST-215ENST00000505143 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
CAST-215ENST00000505143 MT1AP04731 61 aa0.9□□□□□ -2.27
CAST-215ENST00000505143 KRTAP6-1Q3LI64 71 aa0.89□□□□□ -2.27
CAST-215ENST00000505143 KRTAP6-2Q3LI66 62 aa0.89□□□□□ -2.27
CAST-215ENST00000505143 PRM1P04553 51 aa0.84□□□□□ -2.27
CAST-215ENST00000505143 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
CAST-215ENST00000505143 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 65.8 ms