RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 A0A1B0GUT8 65 aa-0.52□□□□□ -2.49
ITGB1-216ENST00000493758 PEA15Q15121 130 aa-0.52□□□□□ -2.49
ITGB1-216ENST00000493758 IGLV5-48A0A075B6I7 105 aa-0.53□□□□□ -2.49
ITGB1-216ENST00000493758 CYB5AP00167 134 aa-0.53□□□□□ -2.49
ITGB1-216ENST00000493758 HMGN2P05204 90 aaKnown RBP-0.53□□□□□ -2.49
ITGB1-216ENST00000493758 RPS27P42677 84 aaKnown RBP-0.53□□□□□ -2.49
ITGB1-216ENST00000493758 IFI6P09912 130 aa-0.54□□□□□ -2.5
ITGB1-216ENST00000493758 SNRPFP62306 86 aaKnown RBP-0.54□□□□□ -2.5
ITGB1-216ENST00000493758 NDUFA1O15239 70 aa-0.55□□□□□ -2.5
ITGB1-216ENST00000493758 TNP1P09430 55 aa-0.55□□□□□ -2.5
ITGB1-216ENST00000493758 S100A8P05109 93 aa-0.56□□□□□ -2.5
ITGB1-216ENST00000493758 CRIP1P50238 77 aa-0.56□□□□□ -2.5
ITGB1-216ENST00000493758 PKIAP61925 76 aa-0.56□□□□□ -2.5
ITGB1-216ENST00000493758 C20orf78Q9BR46 151 aa-0.57□□□□□ -2.5
ITGB1-216ENST00000493758 SNHG12Q9BXW3 62 aa-0.57□□□□□ -2.5
ITGB1-216ENST00000493758 TRAV21A0A0B4J279 112 aa-0.58□□□□□ -2.5
ITGB1-216ENST00000493758 PVALEFA0A1B0GWK0 134 aa-0.58□□□□□ -2.5
ITGB1-216ENST00000493758 LINC01590Q5TEZ4 76 aa-0.58□□□□□ -2.5
ITGB1-216ENST00000493758 ARHGAP5-AS1Q96IT6 56 aa-0.59□□□□□ -2.5
ITGB1-216ENST00000493758 KCNQ1DNQ9H478 68 aa-0.59□□□□□ -2.5
ITGB1-216ENST00000493758 V9GYS6 101 aa-0.59□□□□□ -2.5
ITGB1-216ENST00000493758 MYMXA0A1B0GTQ4 84 aa-0.6□□□□□ -2.51
ITGB1-216ENST00000493758 ETDCA0A1B0GVM5 59 aa-0.6□□□□□ -2.51
ITGB1-216ENST00000493758 C3orf79P0CE67 100 aa-0.6□□□□□ -2.51
ITGB1-216ENST00000493758 IAPPP10997 89 aa-0.6□□□□□ -2.51
ITGB1-216ENST00000493758 Q9H521 79 aa-0.6□□□□□ -2.51
ITGB1-216ENST00000493758 MMP24-AS1A0A0U1RRL7 71 aa-0.61□□□□□ -2.51
ITGB1-216ENST00000493758 SNRPGP62308 76 aaKnown RBP-0.61□□□□□ -2.51
ITGB1-216ENST00000493758 M0QY20 66 aa-0.62□□□□□ -2.51
ITGB1-216ENST00000493758 NDUFB1O75438 58 aa-0.62□□□□□ -2.51
ITGB1-216ENST00000493758 POLR2KP53803 58 aaKnown RBP-0.62□□□□□ -2.51
ITGB1-216ENST00000493758 LINC00158P58513 81 aa-0.62□□□□□ -2.51
ITGB1-216ENST00000493758 PYY3Q5JQD4 70 aa-0.62□□□□□ -2.51
ITGB1-216ENST00000493758 CEBPZOSA8MTT3 80 aa-0.63□□□□□ -2.51
ITGB1-216ENST00000493758 SNRPGP15A8MWD9 76 aa-0.64□□□□□ -2.51
ITGB1-216ENST00000493758 H3BVH4 76 aa-0.64□□□□□ -2.51
ITGB1-216ENST00000493758 LINC00643Q86TS7 51 aa-0.64□□□□□ -2.51
ITGB1-216ENST00000493758 S100A16Q96FQ6 103 aaKnown RBP-0.64□□□□□ -2.51
ITGB1-216ENST00000493758 TOMM7Q9P0U1 55 aa-0.64□□□□□ -2.51
ITGB1-216ENST00000493758 ABRACLQ9P1F3 81 aa-0.64□□□□□ -2.51
ITGB1-216ENST00000493758 ACYP1P07311 99 aa-0.66□□□□□ -2.52
ITGB1-216ENST00000493758 RPL39LQ96EH5 51 aaKnown RBP-0.66□□□□□ -2.52
ITGB1-216ENST00000493758 H3BUT2 72 aa-0.67□□□□□ -2.52
ITGB1-216ENST00000493758 IFI27P40305 119 aaPredicted RBP-0.67□□□□□ -2.52
ITGB1-216ENST00000493758 SMIM2Q9BVW6 85 aa-0.67□□□□□ -2.52
ITGB1-216ENST00000493758 UMAD1C9J7I0 102 aa-0.68□□□□□ -2.52
ITGB1-216ENST00000493758 KANTRA0A1W2PQU2 76 aa-0.69□□□□□ -2.52
ITGB1-216ENST00000493758 RPL39P62891 51 aaKnown RBP-0.69□□□□□ -2.52
ITGB1-216ENST00000493758 A0A087WXM4 84 aa-0.7□□□□□ -2.52
ITGB1-216ENST00000493758 NMES1Q9C002 83 aa-0.72□□□□□ -2.52
ITGB1-216ENST00000493758 SMIM13P0DJ93 91 aa-0.73□□□□□ -2.53
ITGB1-216ENST00000493758 ATP5EP2Q5VTU8 51 aa-0.73□□□□□ -2.53
ITGB1-216ENST00000493758 S100A13Q99584 98 aa-0.73□□□□□ -2.53
ITGB1-216ENST00000493758 CMC2Q9NRP2 79 aa-0.73□□□□□ -2.53
ITGB1-216ENST00000493758 NREPQ16612 68 aa-0.74□□□□□ -2.53
ITGB1-216ENST00000493758 ST20Q9HBF5 79 aa-0.76□□□□□ -2.53
ITGB1-216ENST00000493758 IGIPA6NJ69 53 aa-0.77□□□□□ -2.53
ITGB1-216ENST00000493758 PDCD5O14737 125 aa-0.77□□□□□ -2.53
ITGB1-216ENST00000493758 FCER1GP30273 86 aa-0.77□□□□□ -2.53
ITGB1-216ENST00000493758 ADIRFQ15847 76 aa-0.78□□□□□ -2.53
ITGB1-216ENST00000493758 UBL5Q9BZL1 73 aa-0.81□□□□□ -2.54
ITGB1-216ENST00000493758 SMIM27A0A1W2PRY6 76 aa-0.82□□□□□ -2.54
ITGB1-216ENST00000493758 K7EMI3 77 aa-0.83□□□□□ -2.54
ITGB1-216ENST00000493758 GNG2P59768 71 aa-0.83□□□□□ -2.54
ITGB1-216ENST00000493758 BVES-AS1Q5T3Y7 98 aa-0.83□□□□□ -2.54
ITGB1-216ENST00000493758 LINC00308Q8TCZ7 52 aa-0.84□□□□□ -2.54
ITGB1-216ENST00000493758 TMEM167BQ9NRX6 74 aa-0.89□□□□□ -2.55
ITGB1-216ENST00000493758 C18orf32Q8TCD1 76 aa-0.91□□□□□ -2.56
ITGB1-216ENST00000493758 H0YGX0 51 aa-0.96□□□□□ -2.56
ITGB1-216ENST00000493758 PLNP26678 52 aa-0.97□□□□□ -2.56
ITGB1-216ENST00000493758 SERF2P84101 59 aa-0.97□□□□□ -2.56
ITGB1-216ENST00000493758 LINC01549A6NIU2 74 aa-0.98□□□□□ -2.57
ITGB1-216ENST00000493758 ATXN8Q156A1 80 aa-0.98□□□□□ -2.57
ITGB1-216ENST00000493758 S100ZQ8WXG8 99 aa-0.98□□□□□ -2.57
ITGB1-216ENST00000493758 GNG13Q9P2W3 67 aa-0.99□□□□□ -2.57
ITGB1-216ENST00000493758 SMIM31A0A1B0GVY4 71 aa-1.01□□□□□ -2.57
ITGB1-216ENST00000493758 SMCO4Q9NRQ5 59 aa-1.02□□□□□ -2.57
ITGB1-216ENST00000493758 TOMM5Q8N4H5 51 aa-1.07□□□□□ -2.58
Retrieved 78 of 20,778 RNA–protein pairs in 8.5 ms