RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 ACYP2P14621 99 aa0.43□□□□□ -2.34
GAPVD1-211ENST00000467707 MT1HP80294 61 aa0.43□□□□□ -2.34
GAPVD1-211ENST00000467707 LINC01556Q5JQF7 62 aa0.43□□□□□ -2.34
GAPVD1-211ENST00000467707 ATP5EP2Q5VTU8 51 aa0.43□□□□□ -2.34
GAPVD1-211ENST00000467707 LINC00308Q8TCZ7 52 aa0.43□□□□□ -2.34
GAPVD1-211ENST00000467707 PRO0255Q9UI72 69 aa0.43□□□□□ -2.34
GAPVD1-211ENST00000467707 DSTQ03001 7570 aaKnown RBP0.43□□□□□ -2.34
GAPVD1-211ENST00000467707 MUC17Q685J3 4493 aa0.43□□□□□ -2.34
GAPVD1-211ENST00000467707 NDUFB1O75438 58 aa0.42□□□□□ -2.34
GAPVD1-211ENST00000467707 MGPP08493 103 aa0.42□□□□□ -2.34
GAPVD1-211ENST00000467707 COX6A2Q02221 97 aa0.42□□□□□ -2.34
GAPVD1-211ENST00000467707 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.42□□□□□ -2.34
GAPVD1-211ENST00000467707 Q6ZRX8 168 aa0.42□□□□□ -2.34
GAPVD1-211ENST00000467707 SMIM11BQ8TCY0 68 aa0.42□□□□□ -2.34
GAPVD1-211ENST00000467707 CDKN2A-AS1Q9UH64 79 aa0.42□□□□□ -2.34
GAPVD1-211ENST00000467707 H3BVH4 76 aa0.41□□□□□ -2.34
GAPVD1-211ENST00000467707 SPRR1AP35321 89 aa0.41□□□□□ -2.34
GAPVD1-211ENST00000467707 RPL39P62891 51 aaKnown RBP0.41□□□□□ -2.34
GAPVD1-211ENST00000467707 CLPSL2Q6UWE3 100 aa0.41□□□□□ -2.34
GAPVD1-211ENST00000467707 Q8IZM0 81 aa0.41□□□□□ -2.34
GAPVD1-211ENST00000467707 UBL5Q9BZL1 73 aa0.41□□□□□ -2.34
GAPVD1-211ENST00000467707 KCNQ1DNQ9H478 68 aa0.41□□□□□ -2.34
GAPVD1-211ENST00000467707 CRIPTQ9P021 101 aa0.41□□□□□ -2.34
GAPVD1-211ENST00000467707 A0A096LNI7 61 aa0.4□□□□□ -2.35
GAPVD1-211ENST00000467707 ETDCA0A1B0GVM5 59 aa0.4□□□□□ -2.35
GAPVD1-211ENST00000467707 SPRR1BP22528 89 aa0.4□□□□□ -2.35
GAPVD1-211ENST00000467707 COX7BP24311 80 aa0.4□□□□□ -2.35
GAPVD1-211ENST00000467707 NREPQ16612 68 aa0.4□□□□□ -2.35
GAPVD1-211ENST00000467707 ENHOQ6UWT2 76 aa0.4□□□□□ -2.35
GAPVD1-211ENST00000467707 RPL39LQ96EH5 51 aaKnown RBP0.4□□□□□ -2.35
GAPVD1-211ENST00000467707 TP53AIP1Q9HCN2 124 aa0.4□□□□□ -2.35
GAPVD1-211ENST00000467707 A0A1B0GU69 56 aa0.39□□□□□ -2.35
GAPVD1-211ENST00000467707 SPRR2EP22531 72 aa0.39□□□□□ -2.35
GAPVD1-211ENST00000467707 SPRR2BP35325 72 aa0.39□□□□□ -2.35
GAPVD1-211ENST00000467707 SPRR2AP35326 72 aa0.39□□□□□ -2.35
GAPVD1-211ENST00000467707 LINC00158P58513 81 aa0.39□□□□□ -2.35
GAPVD1-211ENST00000467707 C9orf92A6NGG3 77 aa0.38□□□□□ -2.35
GAPVD1-211ENST00000467707 SPRR2DP22532 72 aa0.38□□□□□ -2.35
GAPVD1-211ENST00000467707 KRTAP19-2Q3LHN2 52 aa0.38□□□□□ -2.35
GAPVD1-211ENST00000467707 KRTAP19-6Q3LI70 58 aa0.38□□□□□ -2.35
GAPVD1-211ENST00000467707 SSBP3-AS1Q7Z2R9 100 aa0.38□□□□□ -2.35
GAPVD1-211ENST00000467707 MT2AP02795 61 aa0.37□□□□□ -2.35
GAPVD1-211ENST00000467707 MT1FP04733 61 aa0.37□□□□□ -2.35
GAPVD1-211ENST00000467707 SPRR2FQ96RM1 72 aa0.37□□□□□ -2.35
GAPVD1-211ENST00000467707 K7EQZ3 153 aa0.36□□□□□ -2.35
GAPVD1-211ENST00000467707 SPINK1P00995 79 aa0.36□□□□□ -2.35
GAPVD1-211ENST00000467707 PRLHP81277 87 aa0.36□□□□□ -2.35
GAPVD1-211ENST00000467707 WFDC13Q8IUB5 93 aa0.36□□□□□ -2.35
GAPVD1-211ENST00000467707 C6orf48Q9UBA6 75 aa0.36□□□□□ -2.35
GAPVD1-211ENST00000467707 MMP24-AS1A0A0U1RRL7 71 aa0.35□□□□□ -2.35
GAPVD1-211ENST00000467707 MT4P47944 62 aa0.35□□□□□ -2.35
GAPVD1-211ENST00000467707 RPS29P62273 56 aaKnown RBP0.35□□□□□ -2.35
GAPVD1-211ENST00000467707 MRPL34Q9BQ48 92 aaKnown RBP0.35□□□□□ -2.35
GAPVD1-211ENST00000467707 TOMM7Q9P0U1 55 aa0.35□□□□□ -2.35
GAPVD1-211ENST00000467707 KRTAP8-1Q8IUC2 63 aa0.34□□□□□ -2.36
GAPVD1-211ENST00000467707 FLGP20930 4061 aaPredicted RBP0.34□□□□□ -2.36
GAPVD1-211ENST00000467707 H0YAA0 97 aa0.33□□□□□ -2.36
GAPVD1-211ENST00000467707 M0QZ58 72 aa0.33□□□□□ -2.36
GAPVD1-211ENST00000467707 DEFB105AQ8NG35 78 aa0.33□□□□□ -2.36
GAPVD1-211ENST00000467707 H1FX-AS1Q4G0G2 97 aa0.32□□□□□ -2.36
GAPVD1-211ENST00000467707 MT1BP07438 61 aa0.31□□□□□ -2.36
GAPVD1-211ENST00000467707 KRTAP19-8Q3LI54 63 aa0.29□□□□□ -2.36
GAPVD1-211ENST00000467707 S4R3F8 94 aa0.29□□□□□ -2.36
GAPVD1-211ENST00000467707 SPRR2GQ9BYE4 73 aa0.28□□□□□ -2.36
GAPVD1-211ENST00000467707 MT1XP80297 61 aa0.27□□□□□ -2.37
GAPVD1-211ENST00000467707 KRTAP20-2Q3LI61 65 aa0.27□□□□□ -2.37
GAPVD1-211ENST00000467707 TNP1P09430 55 aa0.26□□□□□ -2.37
GAPVD1-211ENST00000467707 MT1EP04732 61 aa0.25□□□□□ -2.37
GAPVD1-211ENST00000467707 MT1GP13640 62 aa0.25□□□□□ -2.37
GAPVD1-211ENST00000467707 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
GAPVD1-211ENST00000467707 MT1AP04731 61 aa0.24□□□□□ -2.37
GAPVD1-211ENST00000467707 MT1MQ8N339 61 aa0.24□□□□□ -2.37
GAPVD1-211ENST00000467707 KRTAP19-5Q3LI72 72 aa0.23□□□□□ -2.37
GAPVD1-211ENST00000467707 KRTAP19-7Q3SYF9 63 aa0.23□□□□□ -2.37
GAPVD1-211ENST00000467707 MT1LQ93083 61 aa0.23□□□□□ -2.37
GAPVD1-211ENST00000467707 PRM1P04553 51 aa0.22□□□□□ -2.37
GAPVD1-211ENST00000467707 KRTAP6-2Q3LI66 62 aa0.21□□□□□ -2.38
GAPVD1-211ENST00000467707 KRTAP6-1Q3LI64 71 aa0.19□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 102.6 ms