RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 DNAH2Q9P225 4427 aa0.04□□□□□ -2.4
CDC42BPA-211ENST00000466538 DNAH3Q8TD57 4116 aa0.04□□□□□ -2.4
CDC42BPA-211ENST00000466538 DYNC1H1Q14204 4646 aaKnown RBP0.03□□□□□ -2.4
CDC42BPA-211ENST00000466538 DEFB1P60022 68 aa0□□□□□ -2.41
CDC42BPA-211ENST00000466538 ATP7AQ04656 1500 aa0□□□□□ -2.41
CDC42BPA-211ENST00000466538 CLTCL1P53675 1640 aa-0.01□□□□□ -2.41
CDC42BPA-211ENST00000466538 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
CDC42BPA-211ENST00000466538 KRTAP19-7Q3SYF9 63 aa-0.01□□□□□ -2.41
CDC42BPA-211ENST00000466538 DNAH7Q8WXX0 4024 aa-0.02□□□□□ -2.41
CDC42BPA-211ENST00000466538 KRTAP8-1Q8IUC2 63 aa-0.02□□□□□ -2.41
CDC42BPA-211ENST00000466538 FAT1Q14517 4588 aa-0.03□□□□□ -2.41
CDC42BPA-211ENST00000466538 AKAP9Q99996 3911 aa-0.04□□□□□ -2.42
CDC42BPA-211ENST00000466538 TOMM7Q9P0U1 55 aa-0.04□□□□□ -2.42
CDC42BPA-211ENST00000466538 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.04□□□□□ -2.42
CDC42BPA-211ENST00000466538 TOP2AP11388 1531 aaKnown RBP-0.04□□□□□ -2.42
CDC42BPA-211ENST00000466538 DNAH1Q9P2D7 4330 aa-0.04□□□□□ -2.42
CDC42BPA-211ENST00000466538 DNAH6Q9C0G6 4158 aa-0.05□□□□□ -2.42
CDC42BPA-211ENST00000466538 SAMD9LQ8IVG5 1584 aa-0.05□□□□□ -2.42
CDC42BPA-211ENST00000466538 KRTAP19-8Q3LI54 63 aa-0.05□□□□□ -2.42
CDC42BPA-211ENST00000466538 KRTAP20-2Q3LI61 65 aa-0.05□□□□□ -2.42
CDC42BPA-211ENST00000466538 DMDP11532 3685 aa-0.05□□□□□ -2.42
CDC42BPA-211ENST00000466538 DNAH5Q8TE73 4624 aa-0.05□□□□□ -2.42
CDC42BPA-211ENST00000466538 VPS13DQ5THJ4 4388 aa-0.05□□□□□ -2.42
CDC42BPA-211ENST00000466538 SMR3BP02814 79 aaPredicted RBP-0.06□□□□□ -2.42
CDC42BPA-211ENST00000466538 KRTAP19-5Q3LI72 72 aa-0.07□□□□□ -2.42
CDC42BPA-211ENST00000466538 CMYA5Q8N3K9 4069 aa-0.08□□□□□ -2.42
CDC42BPA-211ENST00000466538 RPL39P62891 51 aaKnown RBP-0.09□□□□□ -2.42
CDC42BPA-211ENST00000466538 MT1HP80294 61 aa-0.09□□□□□ -2.42
CDC42BPA-211ENST00000466538 PLECQ15149 4684 aaKnown RBP-0.1□□□□□ -2.43
CDC42BPA-211ENST00000466538 TRRAPQ9Y4A5 3859 aa-0.11□□□□□ -2.43
CDC42BPA-211ENST00000466538 SNRPGP62308 76 aaKnown RBP-0.11□□□□□ -2.43
CDC42BPA-211ENST00000466538 MUC17Q685J3 4493 aa-0.11□□□□□ -2.43
CDC42BPA-211ENST00000466538 DNAH8Q96JB1 4490 aa-0.12□□□□□ -2.43
CDC42BPA-211ENST00000466538 LEAP2Q969E1 77 aa-0.12□□□□□ -2.43
CDC42BPA-211ENST00000466538 DNAH10Q8IVF4 4471 aa-0.13□□□□□ -2.43
CDC42BPA-211ENST00000466538 LINC01590Q5TEZ4 76 aa-0.13□□□□□ -2.43
CDC42BPA-211ENST00000466538 RPL39LQ96EH5 51 aaKnown RBP-0.14□□□□□ -2.43
CDC42BPA-211ENST00000466538 MT1EP04732 61 aa-0.18□□□□□ -2.44
CDC42BPA-211ENST00000466538 DEFB136Q30KP8 78 aa-0.18□□□□□ -2.44
CDC42BPA-211ENST00000466538 DNAH17Q9UFH2 4485 aa-0.19□□□□□ -2.44
CDC42BPA-211ENST00000466538 MT1XP80297 61 aa-0.21□□□□□ -2.44
CDC42BPA-211ENST00000466538 RHPN1-AS1Q9BWJ2 59 aa-0.21□□□□□ -2.44
CDC42BPA-211ENST00000466538 MROH2BQ7Z745 1585 aa-0.22□□□□□ -2.44
CDC42BPA-211ENST00000466538 DUOX1Q9NRD9 1551 aa-0.22□□□□□ -2.44
CDC42BPA-211ENST00000466538 MT1LQ93083 61 aa-0.22□□□□□ -2.44
CDC42BPA-211ENST00000466538 DEFB4AO15263 64 aa-0.26□□□□□ -2.45
CDC42BPA-211ENST00000466538 MT1BP07438 61 aa-0.27□□□□□ -2.45
CDC42BPA-211ENST00000466538 DEFB104AQ8WTQ1 72 aa-0.27□□□□□ -2.45
CDC42BPA-211ENST00000466538 A0A096LNI7 61 aa-0.29□□□□□ -2.46
CDC42BPA-211ENST00000466538 ARHGAP5-AS1Q96IT6 56 aa-0.29□□□□□ -2.46
CDC42BPA-211ENST00000466538 GCC2Q8IWJ2 1684 aa-0.31□□□□□ -2.46
CDC42BPA-211ENST00000466538 MT1HL1P0DM35 61 aa-0.32□□□□□ -2.46
CDC42BPA-211ENST00000466538 HTN1P15515 57 aa-0.32□□□□□ -2.46
CDC42BPA-211ENST00000466538 KRTAP19-2Q3LHN2 52 aa-0.33□□□□□ -2.46
CDC42BPA-211ENST00000466538 K7EIM0 57 aa-0.34□□□□□ -2.46
CDC42BPA-211ENST00000466538 MT2AP02795 61 aa-0.34□□□□□ -2.46
CDC42BPA-211ENST00000466538 MT1FP04733 61 aa-0.34□□□□□ -2.46
CDC42BPA-211ENST00000466538 MT1GP13640 62 aa-0.34□□□□□ -2.46
CDC42BPA-211ENST00000466538 PRCDQ00LT1 54 aa-0.34□□□□□ -2.46
CDC42BPA-211ENST00000466538 DEFB133Q30KQ1 61 aa-0.34□□□□□ -2.46
CDC42BPA-211ENST00000466538 H3BUX3 64 aa-0.36□□□□□ -2.47
CDC42BPA-211ENST00000466538 MT1MQ8N339 61 aa-0.36□□□□□ -2.47
CDC42BPA-211ENST00000466538 RPS29P62273 56 aaKnown RBP-0.37□□□□□ -2.47
CDC42BPA-211ENST00000466538 CD52P31358 61 aa-0.38□□□□□ -2.47
CDC42BPA-211ENST00000466538 DEFB124Q8NES8 71 aa-0.4□□□□□ -2.47
CDC42BPA-211ENST00000466538 TTTY10Q9BZA0 68 aa-0.43□□□□□ -2.48
CDC42BPA-211ENST00000466538 H3BSH0 61 aa-0.45□□□□□ -2.48
CDC42BPA-211ENST00000466538 TMEM167AQ8TBQ9 72 aa-0.47□□□□□ -2.48
CDC42BPA-211ENST00000466538 RPL39P5Q59GN2 51 aa-0.54□□□□□ -2.5
CDC42BPA-211ENST00000466538 DEFB108AA8MXU0 73 aa-0.56□□□□□ -2.5
CDC42BPA-211ENST00000466538 LINC01556Q5JQF7 62 aa-0.56□□□□□ -2.5
CDC42BPA-211ENST00000466538 APELAP0DMC3 54 aa-0.62□□□□□ -2.51
CDC42BPA-211ENST00000466538 A0A096LPF7 62 aa-0.63□□□□□ -2.51
CDC42BPA-211ENST00000466538 Q9Y3F1 56 aa-0.68□□□□□ -2.52
CDC42BPA-211ENST00000466538 STATHP02808 62 aa-0.69□□□□□ -2.52
CDC42BPA-211ENST00000466538 HTN3P15516 51 aa-0.77□□□□□ -2.53
CDC42BPA-211ENST00000466538 DEFB108BQ8NET1 73 aa-0.84□□□□□ -2.54
CDC42BPA-211ENST00000466538 COX14Q96I36 57 aa-0.87□□□□□ -2.55
Retrieved 78 of 20,778 RNA–protein pairs in 72.1 ms