RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
NEDD4L-208ENST00000456173 USH2AO75445 5202 aa3.86□□□□□ -1.79
NEDD4L-208ENST00000456173 MT1EP04732 61 aa3.8□□□□□ -1.8
NEDD4L-208ENST00000456173 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
NEDD4L-208ENST00000456173 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
NEDD4L-208ENST00000456173 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
NEDD4L-208ENST00000456173 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
NEDD4L-208ENST00000456173 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
NEDD4L-208ENST00000456173 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
NEDD4L-208ENST00000456173 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
NEDD4L-208ENST00000456173 SPRR2EP22531 72 aa3.72□□□□□ -1.81
NEDD4L-208ENST00000456173 SPRR2BP35325 72 aa3.72□□□□□ -1.81
NEDD4L-208ENST00000456173 SPRR2AP35326 72 aa3.72□□□□□ -1.81
NEDD4L-208ENST00000456173 MT3P25713 68 aa3.7□□□□□ -1.82
NEDD4L-208ENST00000456173 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
NEDD4L-208ENST00000456173 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
NEDD4L-208ENST00000456173 MT1MQ8N339 61 aa3.65□□□□□ -1.82
NEDD4L-208ENST00000456173 KRTAP19-6Q3LI70 58 aa3.65□□□□□ -1.83
NEDD4L-208ENST00000456173 LCE2DQ5TA82 110 aaPredicted RBP3.62□□□□□ -1.83
NEDD4L-208ENST00000456173 KMT2DO14686 5537 aa3.61□□□□□ -1.83
NEDD4L-208ENST00000456173 KRTAP19-7Q3SYF9 63 aa3.61□□□□□ -1.83
NEDD4L-208ENST00000456173 DSTQ03001 7570 aaKnown RBP3.58□□□□□ -1.84
NEDD4L-208ENST00000456173 SPRR2DP22532 72 aa3.57□□□□□ -1.84
NEDD4L-208ENST00000456173 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
NEDD4L-208ENST00000456173 KRTAP9-7A8MTY7 169 aa3.51□□□□□ -1.85
NEDD4L-208ENST00000456173 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
NEDD4L-208ENST00000456173 SSPOA2VEC9 5147 aa3.5□□□□□ -1.85
NEDD4L-208ENST00000456173 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.85
NEDD4L-208ENST00000456173 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.85
NEDD4L-208ENST00000456173 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
NEDD4L-208ENST00000456173 MT1AP04731 61 aa3.4□□□□□ -1.86
NEDD4L-208ENST00000456173 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
NEDD4L-208ENST00000456173 LCE1DQ5T752 114 aa3.36□□□□□ -1.87
NEDD4L-208ENST00000456173 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
NEDD4L-208ENST00000456173 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
NEDD4L-208ENST00000456173 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
NEDD4L-208ENST00000456173 MT4P47944 62 aa3.28□□□□□ -1.89
NEDD4L-208ENST00000456173 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
NEDD4L-208ENST00000456173 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
NEDD4L-208ENST00000456173 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
NEDD4L-208ENST00000456173 LCE5AQ5TCM9 118 aa3.13□□□□□ -1.91
NEDD4L-208ENST00000456173 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
NEDD4L-208ENST00000456173 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
NEDD4L-208ENST00000456173 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
NEDD4L-208ENST00000456173 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
NEDD4L-208ENST00000456173 NEBP20929 6669 aa2.98□□□□□ -1.93
NEDD4L-208ENST00000456173 KRTAP5-9P26371 169 aa2.97□□□□□ -1.93
NEDD4L-208ENST00000456173 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
NEDD4L-208ENST00000456173 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.94
NEDD4L-208ENST00000456173 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
NEDD4L-208ENST00000456173 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
NEDD4L-208ENST00000456173 LCE4AQ5TA78 99 aa2.79□□□□□ -1.96
NEDD4L-208ENST00000456173 KRTAP4-6Q9BYQ5 205 aa2.78□□□□□ -1.96
NEDD4L-208ENST00000456173 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
NEDD4L-208ENST00000456173 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
NEDD4L-208ENST00000456173 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
NEDD4L-208ENST00000456173 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
NEDD4L-208ENST00000456173 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
NEDD4L-208ENST00000456173 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
NEDD4L-208ENST00000456173 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
NEDD4L-208ENST00000456173 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
NEDD4L-208ENST00000456173 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
NEDD4L-208ENST00000456173 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.05
NEDD4L-208ENST00000456173 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
NEDD4L-208ENST00000456173 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
NEDD4L-208ENST00000456173 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
NEDD4L-208ENST00000456173 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
NEDD4L-208ENST00000456173 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
NEDD4L-208ENST00000456173 KRTAP5-1Q6L8H4 278 aa1.91□□□□□ -2.1
NEDD4L-208ENST00000456173 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
NEDD4L-208ENST00000456173 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
NEDD4L-208ENST00000456173 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
NEDD4L-208ENST00000456173 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
NEDD4L-208ENST00000456173 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
NEDD4L-208ENST00000456173 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
NEDD4L-208ENST00000456173 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
NEDD4L-208ENST00000456173 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 8.5 ms