RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 USH2AO75445 5202 aa5□□□□□ -1.61
SIK3-205ENST00000446921 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
SIK3-205ENST00000446921 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
SIK3-205ENST00000446921 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
SIK3-205ENST00000446921 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
SIK3-205ENST00000446921 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
SIK3-205ENST00000446921 LCE1EQ5T753 118 aa4.9□□□□□ -1.62
SIK3-205ENST00000446921 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
SIK3-205ENST00000446921 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
SIK3-205ENST00000446921 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
SIK3-205ENST00000446921 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
SIK3-205ENST00000446921 MT1EP04732 61 aa4.85□□□□□ -1.63
SIK3-205ENST00000446921 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.64
SIK3-205ENST00000446921 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
SIK3-205ENST00000446921 LCE2BO14633 110 aa4.81□□□□□ -1.64
SIK3-205ENST00000446921 LCE3DQ9BYE3 92 aa4.78□□□□□ -1.64
SIK3-205ENST00000446921 KRTAP9-2Q9BYQ4 174 aa4.77□□□□□ -1.65
SIK3-205ENST00000446921 LCE3EQ5T5B0 92 aa4.76□□□□□ -1.65
SIK3-205ENST00000446921 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
SIK3-205ENST00000446921 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
SIK3-205ENST00000446921 MT1MQ8N339 61 aa4.53□□□□□ -1.68
SIK3-205ENST00000446921 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
SIK3-205ENST00000446921 KRTAP5-5Q701N2 237 aaPredicted RBP4.5□□□□□ -1.69
SIK3-205ENST00000446921 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
SIK3-205ENST00000446921 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
SIK3-205ENST00000446921 MUC19Q7Z5P9 8384 aa4.45□□□□□ -1.7
SIK3-205ENST00000446921 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
SIK3-205ENST00000446921 MT1AP04731 61 aa4.42□□□□□ -1.7
SIK3-205ENST00000446921 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.72
SIK3-205ENST00000446921 LCE2DQ5TA82 110 aaPredicted RBP4.3□□□□□ -1.72
SIK3-205ENST00000446921 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
SIK3-205ENST00000446921 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
SIK3-205ENST00000446921 SPRR2FQ96RM1 72 aa4.24□□□□□ -1.73
SIK3-205ENST00000446921 MACF1Q9UPN3 7388 aaKnown RBP4.08□□□□□ -1.76
SIK3-205ENST00000446921 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
SIK3-205ENST00000446921 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
SIK3-205ENST00000446921 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
SIK3-205ENST00000446921 MT3P25713 68 aa3.83□□□□□ -1.8
SIK3-205ENST00000446921 SPRR2AP35326 72 aa3.83□□□□□ -1.8
SIK3-205ENST00000446921 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
SIK3-205ENST00000446921 SPRR2EP22531 72 aa3.81□□□□□ -1.8
SIK3-205ENST00000446921 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
SIK3-205ENST00000446921 SPRR2DP22532 72 aa3.78□□□□□ -1.8
SIK3-205ENST00000446921 SPRR2BP35325 72 aa3.65□□□□□ -1.83
SIK3-205ENST00000446921 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
SIK3-205ENST00000446921 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.41□□□□□ -1.86
SIK3-205ENST00000446921 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
SIK3-205ENST00000446921 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
SIK3-205ENST00000446921 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
SIK3-205ENST00000446921 MT4P47944 62 aa3.2□□□□□ -1.9
SIK3-205ENST00000446921 NEBP20929 6669 aa3.13□□□□□ -1.91
SIK3-205ENST00000446921 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
SIK3-205ENST00000446921 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
SIK3-205ENST00000446921 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
SIK3-205ENST00000446921 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
SIK3-205ENST00000446921 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
SIK3-205ENST00000446921 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
SIK3-205ENST00000446921 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
SIK3-205ENST00000446921 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
SIK3-205ENST00000446921 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
SIK3-205ENST00000446921 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
SIK3-205ENST00000446921 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
SIK3-205ENST00000446921 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
SIK3-205ENST00000446921 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.97
SIK3-205ENST00000446921 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
SIK3-205ENST00000446921 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
SIK3-205ENST00000446921 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
SIK3-205ENST00000446921 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
SIK3-205ENST00000446921 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
SIK3-205ENST00000446921 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
SIK3-205ENST00000446921 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
SIK3-205ENST00000446921 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
SIK3-205ENST00000446921 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
SIK3-205ENST00000446921 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
SIK3-205ENST00000446921 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
SIK3-205ENST00000446921 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
SIK3-205ENST00000446921 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms