RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 MT1HP80294 61 aa0.99□□□□□ -2.25
TM9SF3-202ENST00000443638 MUC17Q685J3 4493 aa0.99□□□□□ -2.25
TM9SF3-202ENST00000443638 S4R3F8 94 aa0.98□□□□□ -2.25
TM9SF3-202ENST00000443638 KRTAP19-2Q3LHN2 52 aa0.97□□□□□ -2.25
TM9SF3-202ENST00000443638 APELAP0DMC3 54 aa0.96□□□□□ -2.26
TM9SF3-202ENST00000443638 MUC12Q9UKN1 5478 aa0.96□□□□□ -2.26
TM9SF3-202ENST00000443638 WFDC10BQ8IUB3 73 aa0.95□□□□□ -2.26
TM9SF3-202ENST00000443638 NDUFA1O15239 70 aa0.94□□□□□ -2.26
TM9SF3-202ENST00000443638 SPART-AS1P0CW21 52 aa0.94□□□□□ -2.26
TM9SF3-202ENST00000443638 PRLHP81277 87 aa0.94□□□□□ -2.26
TM9SF3-202ENST00000443638 M0R2T5 61 aa0.93□□□□□ -2.26
TM9SF3-202ENST00000443638 DEFB131AP59861 70 aa0.93□□□□□ -2.26
TM9SF3-202ENST00000443638 KRTAP19-6Q3LI70 58 aa0.92□□□□□ -2.26
TM9SF3-202ENST00000443638 A0A096LPF7 62 aa0.91□□□□□ -2.26
TM9SF3-202ENST00000443638 DEFB1P60022 68 aa0.91□□□□□ -2.26
TM9SF3-202ENST00000443638 FLGP20930 4061 aaPredicted RBP0.9□□□□□ -2.27
TM9SF3-202ENST00000443638 MDN1Q9NU22 5596 aa0.9□□□□□ -2.27
TM9SF3-202ENST00000443638 KRTAP5-10Q6L8G5 202 aa0.89□□□□□ -2.27
TM9SF3-202ENST00000443638 SPRR2EP22531 72 aa0.88□□□□□ -2.27
TM9SF3-202ENST00000443638 SPRR2BP35325 72 aa0.88□□□□□ -2.27
TM9SF3-202ENST00000443638 SPRR2AP35326 72 aa0.88□□□□□ -2.27
TM9SF3-202ENST00000443638 RPL39P5Q59GN2 51 aa0.88□□□□□ -2.27
TM9SF3-202ENST00000443638 RHPN1-AS1Q9BWJ2 59 aa0.88□□□□□ -2.27
TM9SF3-202ENST00000443638 NOP10Q9NPE3 64 aaKnown RBP0.88□□□□□ -2.27
TM9SF3-202ENST00000443638 AHNAK2Q8IVF2 5795 aa0.88□□□□□ -2.27
TM9SF3-202ENST00000443638 MT2AP02795 61 aa0.86□□□□□ -2.27
TM9SF3-202ENST00000443638 MT1FP04733 61 aa0.86□□□□□ -2.27
TM9SF3-202ENST00000443638 HTN1P15515 57 aa0.85□□□□□ -2.27
TM9SF3-202ENST00000443638 SNRPGP62308 76 aaKnown RBP0.85□□□□□ -2.27
TM9SF3-202ENST00000443638 TTTY10Q9BZA0 68 aa0.85□□□□□ -2.27
TM9SF3-202ENST00000443638 DSTQ03001 7570 aaKnown RBP0.85□□□□□ -2.27
TM9SF3-202ENST00000443638 IGLV5-48A0A075B6I7 105 aa0.84□□□□□ -2.27
TM9SF3-202ENST00000443638 SPRR2DP22532 72 aa0.84□□□□□ -2.27
TM9SF3-202ENST00000443638 MMP24-AS1A0A0U1RRL7 71 aa0.83□□□□□ -2.28
TM9SF3-202ENST00000443638 H3BNG1 76 aa0.83□□□□□ -2.28
TM9SF3-202ENST00000443638 LINC01590Q5TEZ4 76 aa0.83□□□□□ -2.28
TM9SF3-202ENST00000443638 LINC01556Q5JQF7 62 aa0.82□□□□□ -2.28
TM9SF3-202ENST00000443638 SPRR2FQ96RM1 72 aa0.82□□□□□ -2.28
TM9SF3-202ENST00000443638 K7EIM0 57 aa0.81□□□□□ -2.28
TM9SF3-202ENST00000443638 PRM1P04553 51 aa0.81□□□□□ -2.28
TM9SF3-202ENST00000443638 TMEM167AQ8TBQ9 72 aa0.81□□□□□ -2.28
TM9SF3-202ENST00000443638 MUC5BQ9HC84 5762 aaPredicted RBP0.8□□□□□ -2.28
TM9SF3-202ENST00000443638 MT4P47944 62 aa0.79□□□□□ -2.28
TM9SF3-202ENST00000443638 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
TM9SF3-202ENST00000443638 A0A096LNI7 61 aa0.78□□□□□ -2.28
TM9SF3-202ENST00000443638 A8MTW9 85 aa0.78□□□□□ -2.28
TM9SF3-202ENST00000443638 M0QY20 66 aa0.77□□□□□ -2.29
TM9SF3-202ENST00000443638 PRCDQ00LT1 54 aa0.77□□□□□ -2.29
TM9SF3-202ENST00000443638 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
TM9SF3-202ENST00000443638 CLPSL2Q6UWE3 100 aa0.76□□□□□ -2.29
TM9SF3-202ENST00000443638 MUC5ACP98088 5654 aa0.75□□□□□ -2.29
TM9SF3-202ENST00000443638 C9orf92A6NGG3 77 aa0.74□□□□□ -2.29
TM9SF3-202ENST00000443638 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
TM9SF3-202ENST00000443638 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
TM9SF3-202ENST00000443638 MT1BP07438 61 aa0.72□□□□□ -2.29
TM9SF3-202ENST00000443638 KRTAP8-1Q8IUC2 63 aa0.71□□□□□ -2.3
TM9SF3-202ENST00000443638 ARHGAP5-AS1Q96IT6 56 aa0.71□□□□□ -2.3
TM9SF3-202ENST00000443638 POLR2KP53803 58 aaKnown RBP0.68□□□□□ -2.3
TM9SF3-202ENST00000443638 M0QZ58 72 aa0.67□□□□□ -2.3
TM9SF3-202ENST00000443638 RPL39P62891 51 aaKnown RBP0.66□□□□□ -2.3
TM9SF3-202ENST00000443638 KRTAP20-2Q3LI61 65 aa0.65□□□□□ -2.31
TM9SF3-202ENST00000443638 TNP1P09430 55 aa0.64□□□□□ -2.31
TM9SF3-202ENST00000443638 KRTAP19-8Q3LI54 63 aa0.63□□□□□ -2.31
TM9SF3-202ENST00000443638 MT1XP80297 61 aa0.6□□□□□ -2.31
TM9SF3-202ENST00000443638 RPL39LQ96EH5 51 aaKnown RBP0.6□□□□□ -2.31
TM9SF3-202ENST00000443638 RPS29P62273 56 aaKnown RBP0.58□□□□□ -2.32
TM9SF3-202ENST00000443638 SPRR2GQ9BYE4 73 aa0.58□□□□□ -2.32
TM9SF3-202ENST00000443638 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
TM9SF3-202ENST00000443638 TOMM7Q9P0U1 55 aa0.55□□□□□ -2.32
TM9SF3-202ENST00000443638 MT1EP04732 61 aa0.54□□□□□ -2.32
TM9SF3-202ENST00000443638 KRTAP19-7Q3SYF9 63 aa0.54□□□□□ -2.32
TM9SF3-202ENST00000443638 MT1MQ8N339 61 aa0.53□□□□□ -2.32
TM9SF3-202ENST00000443638 MT1GP13640 62 aa0.51□□□□□ -2.33
TM9SF3-202ENST00000443638 KRTAP6-2Q3LI66 62 aa0.49□□□□□ -2.33
TM9SF3-202ENST00000443638 KRTAP19-5Q3LI72 72 aa0.47□□□□□ -2.33
TM9SF3-202ENST00000443638 MT1LQ93083 61 aa0.47□□□□□ -2.33
TM9SF3-202ENST00000443638 MT1AP04731 61 aa0.46□□□□□ -2.34
TM9SF3-202ENST00000443638 KRTAP6-1Q3LI64 71 aa0.44□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms