RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 RPS28P62857 69 aaKnown RBP0.49□□□□□ -2.33
HMGB3P12-201ENST00000438745 SPATA45Q537H7 98 aa0.49□□□□□ -2.33
HMGB3P12-201ENST00000438745 BVES-AS1Q5T3Y7 98 aa0.49□□□□□ -2.33
HMGB3P12-201ENST00000438745 BRK1Q8WUW1 75 aa0.49□□□□□ -2.33
HMGB3P12-201ENST00000438745 S100PP25815 95 aa0.48□□□□□ -2.33
HMGB3P12-201ENST00000438745 SPATA8Q6RVD6 105 aa0.48□□□□□ -2.33
HMGB3P12-201ENST00000438745 K7EP34 96 aa0.47□□□□□ -2.33
HMGB3P12-201ENST00000438745 DPM2O94777 84 aa0.47□□□□□ -2.33
HMGB3P12-201ENST00000438745 MT-ND4LP03901 98 aa0.47□□□□□ -2.33
HMGB3P12-201ENST00000438745 A0A1B0GX51 115 aa0.46□□□□□ -2.34
HMGB3P12-201ENST00000438745 C9JAW5 83 aa0.46□□□□□ -2.34
HMGB3P12-201ENST00000438745 IGKCP01834 107 aa0.46□□□□□ -2.34
HMGB3P12-201ENST00000438745 ACYP1P07311 99 aa0.46□□□□□ -2.34
HMGB3P12-201ENST00000438745 SCGB1A1P11684 91 aa0.46□□□□□ -2.34
HMGB3P12-201ENST00000438745 CASC2Q6XLA1 102 aa0.46□□□□□ -2.34
HMGB3P12-201ENST00000438745 SEC11CQ9BY50 192 aa0.46□□□□□ -2.34
HMGB3P12-201ENST00000438745 UQCRQO14949 82 aa0.45□□□□□ -2.34
HMGB3P12-201ENST00000438745 PMCHL2Q9BQD1 86 aa0.45□□□□□ -2.34
HMGB3P12-201ENST00000438745 H0YGX0 51 aa0.43□□□□□ -2.34
HMGB3P12-201ENST00000438745 TNP1P09430 55 aa0.43□□□□□ -2.34
HMGB3P12-201ENST00000438745 C18orf32Q8TCD1 76 aa0.43□□□□□ -2.34
HMGB3P12-201ENST00000438745 PEA15Q15121 130 aa0.42□□□□□ -2.34
HMGB3P12-201ENST00000438745 NREPQ16612 68 aa0.42□□□□□ -2.34
HMGB3P12-201ENST00000438745 LEPROTL1O95214 131 aa0.41□□□□□ -2.34
HMGB3P12-201ENST00000438745 LOC101927531A0A1B0GV80 90 aa0.4□□□□□ -2.35
HMGB3P12-201ENST00000438745 CLLU1Q5K131 121 aa0.4□□□□□ -2.35
HMGB3P12-201ENST00000438745 CYP4F30PQ9H0H9 118 aa0.4□□□□□ -2.35
HMGB3P12-201ENST00000438745 TRAV22A0A0B4J277 110 aa0.39□□□□□ -2.35
HMGB3P12-201ENST00000438745 LINC00208Q96KT6 92 aa0.39□□□□□ -2.35
HMGB3P12-201ENST00000438745 HIGD1BQ9P298 99 aa0.39□□□□□ -2.35
HMGB3P12-201ENST00000438745 KRTDAPP60985 99 aa0.38□□□□□ -2.35
HMGB3P12-201ENST00000438745 K7ERU9 68 aa0.37□□□□□ -2.35
HMGB3P12-201ENST00000438745 DMAC1Q96GE9 116 aa0.37□□□□□ -2.35
HMGB3P12-201ENST00000438745 TP53AIP1Q9HCN2 124 aa0.37□□□□□ -2.35
HMGB3P12-201ENST00000438745 J3QR89 54 aa0.36□□□□□ -2.35
HMGB3P12-201ENST00000438745 ATOH7Q8N100 152 aa0.36□□□□□ -2.35
HMGB3P12-201ENST00000438745 LINC01545Q5VT33 79 aa0.35□□□□□ -2.35
HMGB3P12-201ENST00000438745 ACYP2P14621 99 aa0.34□□□□□ -2.36
HMGB3P12-201ENST00000438745 SPTSSBQ8NFR3 76 aa0.33□□□□□ -2.36
HMGB3P12-201ENST00000438745 SYS1-DBNDD2H3BUS1 97 aa0.32□□□□□ -2.36
HMGB3P12-201ENST00000438745 CCDC179H3BU77 68 aa0.31□□□□□ -2.36
HMGB3P12-201ENST00000438745 COX6CP09669 75 aa0.31□□□□□ -2.36
HMGB3P12-201ENST00000438745 H0Y9P7 68 aa0.29□□□□□ -2.36
HMGB3P12-201ENST00000438745 ATOX1O00244 68 aa0.29□□□□□ -2.36
HMGB3P12-201ENST00000438745 PRO1854Q9UHT4 67 aa0.29□□□□□ -2.36
HMGB3P12-201ENST00000438745 A0A1B0GV90 55 aa0.28□□□□□ -2.36
HMGB3P12-201ENST00000438745 SPCS1Q9Y6A9 102 aa0.28□□□□□ -2.36
HMGB3P12-201ENST00000438745 CHKB-CPT1BH3BT56 60 aa0.27□□□□□ -2.37
HMGB3P12-201ENST00000438745 SERP1Q9Y6X1 66 aa0.26□□□□□ -2.37
HMGB3P12-201ENST00000438745 DLEU1O43261 78 aa0.25□□□□□ -2.37
HMGB3P12-201ENST00000438745 ATXN8Q156A1 80 aa0.24□□□□□ -2.37
HMGB3P12-201ENST00000438745 TMEM218A2RU14 115 aa0.23□□□□□ -2.37
HMGB3P12-201ENST00000438745 H7BZZ5 65 aa0.23□□□□□ -2.37
HMGB3P12-201ENST00000438745 PRR15LQ9BU68 103 aa0.23□□□□□ -2.37
HMGB3P12-201ENST00000438745 UBL5Q9BZL1 73 aa0.23□□□□□ -2.37
HMGB3P12-201ENST00000438745 VAMP8Q9BV40 100 aa0.22□□□□□ -2.37
HMGB3P12-201ENST00000438745 S100A1P23297 94 aa0.19□□□□□ -2.38
HMGB3P12-201ENST00000438745 COX8AP10176 69 aa0.18□□□□□ -2.38
HMGB3P12-201ENST00000438745 APOC3P02656 99 aa0.17□□□□□ -2.38
HMGB3P12-201ENST00000438745 SMIM6P0DI80 62 aa0.17□□□□□ -2.38
HMGB3P12-201ENST00000438745 SERP2Q8N6R1 65 aa0.17□□□□□ -2.38
HMGB3P12-201ENST00000438745 C14orf144Q96I85 54 aa0.16□□□□□ -2.38
HMGB3P12-201ENST00000438745 SVBPQ8N300 66 aa0.15□□□□□ -2.39
HMGB3P12-201ENST00000438745 LINC01558Q9Y6Z2 57 aa0.15□□□□□ -2.39
HMGB3P12-201ENST00000438745 UQCR11O14957 56 aa0.13□□□□□ -2.39
HMGB3P12-201ENST00000438745 HSD52Q0P140 79 aa0.13□□□□□ -2.39
HMGB3P12-201ENST00000438745 ATP5EP56381 51 aaPredicted RBP0.12□□□□□ -2.39
HMGB3P12-201ENST00000438745 GTF2H5Q6ZYL4 71 aa0.12□□□□□ -2.39
HMGB3P12-201ENST00000438745 UQCR10Q9UDW1 63 aa0.1□□□□□ -2.39
HMGB3P12-201ENST00000438745 A0A1B0GU69 56 aa0.07□□□□□ -2.4
HMGB3P12-201ENST00000438745 ATP5EP2Q5VTU8 51 aa0.04□□□□□ -2.4
HMGB3P12-201ENST00000438745 M0R143 59 aa0.03□□□□□ -2.4
HMGB3P12-201ENST00000438745 PRM1P04553 51 aa0□□□□□ -2.41
HMGB3P12-201ENST00000438745 COL5A1-AS1Q5SY13 56 aa0□□□□□ -2.41
HMGB3P12-201ENST00000438745 ETDBQ3ZM63 59 aa-0.04□□□□□ -2.42
HMGB3P12-201ENST00000438745 LINC00643Q86TS7 51 aa-0.07□□□□□ -2.42
HMGB3P12-201ENST00000438745 PYY3Q5JQD4 70 aa-0.09□□□□□ -2.42
Retrieved 77 of 20,778 RNA–protein pairs in 525.5 ms