RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
SCAP-206ENST00000428413 MT1GP13640 62 aa5.22□□□□□ -1.57
SCAP-206ENST00000428413 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
SCAP-206ENST00000428413 SPRR2FQ96RM1 72 aa5.19□□□□□ -1.58
SCAP-206ENST00000428413 KRTAP19-7Q3SYF9 63 aa5.17□□□□□ -1.58
SCAP-206ENST00000428413 MT1LQ93083 61 aa5.09□□□□□ -1.59
SCAP-206ENST00000428413 MT1EP04732 61 aa5.07□□□□□ -1.6
SCAP-206ENST00000428413 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
SCAP-206ENST00000428413 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
SCAP-206ENST00000428413 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
SCAP-206ENST00000428413 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
SCAP-206ENST00000428413 KRTAP19-6Q3LI70 58 aa4.88□□□□□ -1.63
SCAP-206ENST00000428413 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
SCAP-206ENST00000428413 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
SCAP-206ENST00000428413 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
SCAP-206ENST00000428413 KRTAP2-1Q9BYU5 128 aa4.86□□□□□ -1.63
SCAP-206ENST00000428413 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
SCAP-206ENST00000428413 MDN1Q9NU22 5596 aa4.83□□□□□ -1.64
SCAP-206ENST00000428413 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
SCAP-206ENST00000428413 MT1MQ8N339 61 aa4.81□□□□□ -1.64
SCAP-206ENST00000428413 SPRR2EP22531 72 aa4.64□□□□□ -1.67
SCAP-206ENST00000428413 SPRR2BP35325 72 aa4.64□□□□□ -1.67
SCAP-206ENST00000428413 SPRR2AP35326 72 aa4.64□□□□□ -1.67
SCAP-206ENST00000428413 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.64□□□□□ -1.67
SCAP-206ENST00000428413 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
SCAP-206ENST00000428413 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.69
SCAP-206ENST00000428413 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
SCAP-206ENST00000428413 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
SCAP-206ENST00000428413 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
SCAP-206ENST00000428413 SPRR2DP22532 72 aa4.42□□□□□ -1.7
SCAP-206ENST00000428413 PRM1P04553 51 aa4.38□□□□□ -1.71
SCAP-206ENST00000428413 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
SCAP-206ENST00000428413 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
SCAP-206ENST00000428413 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
SCAP-206ENST00000428413 MT1AP04731 61 aa4.2□□□□□ -1.74
SCAP-206ENST00000428413 MT4P47944 62 aa4.2□□□□□ -1.74
SCAP-206ENST00000428413 NEBP20929 6669 aa4.18□□□□□ -1.74
SCAP-206ENST00000428413 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
SCAP-206ENST00000428413 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
SCAP-206ENST00000428413 MUC19Q7Z5P9 8384 aa4.04□□□□□ -1.76
SCAP-206ENST00000428413 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
SCAP-206ENST00000428413 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
SCAP-206ENST00000428413 MT3P25713 68 aa3.99□□□□□ -1.77
SCAP-206ENST00000428413 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
SCAP-206ENST00000428413 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
SCAP-206ENST00000428413 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
SCAP-206ENST00000428413 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
SCAP-206ENST00000428413 KRTAP4-6Q9BYQ5 205 aa3.85□□□□□ -1.79
SCAP-206ENST00000428413 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
SCAP-206ENST00000428413 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.82
SCAP-206ENST00000428413 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
SCAP-206ENST00000428413 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
SCAP-206ENST00000428413 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
SCAP-206ENST00000428413 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
SCAP-206ENST00000428413 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
SCAP-206ENST00000428413 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
SCAP-206ENST00000428413 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
SCAP-206ENST00000428413 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
SCAP-206ENST00000428413 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
SCAP-206ENST00000428413 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
SCAP-206ENST00000428413 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
SCAP-206ENST00000428413 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
SCAP-206ENST00000428413 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
SCAP-206ENST00000428413 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
SCAP-206ENST00000428413 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
SCAP-206ENST00000428413 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
SCAP-206ENST00000428413 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
SCAP-206ENST00000428413 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
SCAP-206ENST00000428413 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
SCAP-206ENST00000428413 KRTAP5-1Q6L8H4 278 aa2.74□□□□□ -1.97
SCAP-206ENST00000428413 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
SCAP-206ENST00000428413 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
SCAP-206ENST00000428413 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
SCAP-206ENST00000428413 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
SCAP-206ENST00000428413 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
SCAP-206ENST00000428413 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
SCAP-206ENST00000428413 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 70.4 ms