RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 KRTAP2-4Q9BYR9 128 aa1.29□□□□□ -2.2
LINC00400-201ENST00000425609 SPCS1Q9Y6A9 102 aa1.29□□□□□ -2.2
LINC00400-201ENST00000425609 TRAV22A0A0B4J277 110 aa1.28□□□□□ -2.2
LINC00400-201ENST00000425609 MIR22HGQ0VDD5 57 aa1.28□□□□□ -2.2
LINC00400-201ENST00000425609 GTF2H5Q6ZYL4 71 aa1.28□□□□□ -2.2
LINC00400-201ENST00000425609 C20orf197Q8N268 126 aa1.28□□□□□ -2.2
LINC00400-201ENST00000425609 CYP4F30PQ9H0H9 118 aa1.28□□□□□ -2.2
LINC00400-201ENST00000425609 UQCRQO14949 82 aa1.27□□□□□ -2.21
LINC00400-201ENST00000425609 COL5A1-AS1Q5SY13 56 aa1.27□□□□□ -2.21
LINC00400-201ENST00000425609 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
LINC00400-201ENST00000425609 MDN1Q9NU22 5596 aa1.27□□□□□ -2.21
LINC00400-201ENST00000425609 K7EP34 96 aa1.25□□□□□ -2.21
LINC00400-201ENST00000425609 ATP5EP2Q5VTU8 51 aa1.25□□□□□ -2.21
LINC00400-201ENST00000425609 H0Y9P7 68 aa1.24□□□□□ -2.21
LINC00400-201ENST00000425609 SPRR2EP22531 72 aa1.24□□□□□ -2.21
LINC00400-201ENST00000425609 SPRR2BP35325 72 aa1.24□□□□□ -2.21
LINC00400-201ENST00000425609 SPRR2AP35326 72 aa1.24□□□□□ -2.21
LINC00400-201ENST00000425609 RPS28P62857 69 aaKnown RBP1.24□□□□□ -2.21
LINC00400-201ENST00000425609 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
LINC00400-201ENST00000425609 KRTAP2-1Q9BYU5 128 aa1.24□□□□□ -2.21
LINC00400-201ENST00000425609 ETDBQ3ZM63 59 aa1.23□□□□□ -2.21
LINC00400-201ENST00000425609 KRTAP8-1Q8IUC2 63 aa1.23□□□□□ -2.21
LINC00400-201ENST00000425609 SPTSSBQ8NFR3 76 aa1.23□□□□□ -2.21
LINC00400-201ENST00000425609 KMT2DO14686 5537 aa1.23□□□□□ -2.21
LINC00400-201ENST00000425609 LINC00208Q96KT6 92 aa1.22□□□□□ -2.21
LINC00400-201ENST00000425609 A0A087WVE0 104 aa1.21□□□□□ -2.22
LINC00400-201ENST00000425609 LOC105371267A0A1B0GV96 52 aa1.21□□□□□ -2.22
LINC00400-201ENST00000425609 M0QZ58 72 aa1.21□□□□□ -2.22
LINC00400-201ENST00000425609 LINC00643Q86TS7 51 aa1.21□□□□□ -2.22
LINC00400-201ENST00000425609 MT-ATP8P03928 68 aa1.2□□□□□ -2.22
LINC00400-201ENST00000425609 ACYP2P14621 99 aa1.2□□□□□ -2.22
LINC00400-201ENST00000425609 SPRR2DP22532 72 aa1.2□□□□□ -2.22
LINC00400-201ENST00000425609 SCGB1A1P11684 91 aa1.19□□□□□ -2.22
LINC00400-201ENST00000425609 MT1XP80297 61 aa1.19□□□□□ -2.22
LINC00400-201ENST00000425609 BRK1Q8WUW1 75 aa1.19□□□□□ -2.22
LINC00400-201ENST00000425609 J3QR89 54 aa1.18□□□□□ -2.22
LINC00400-201ENST00000425609 DMAC1Q96GE9 116 aa1.18□□□□□ -2.22
LINC00400-201ENST00000425609 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
LINC00400-201ENST00000425609 CHKB-CPT1BH3BT56 60 aa1.17□□□□□ -2.22
LINC00400-201ENST00000425609 GPR98Q8WXG9 6306 aa1.15□□□□□ -2.23
LINC00400-201ENST00000425609 SERP1Q9Y6X1 66 aa1.13□□□□□ -2.23
LINC00400-201ENST00000425609 MT1GP13640 62 aa1.1□□□□□ -2.23
LINC00400-201ENST00000425609 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
LINC00400-201ENST00000425609 K7ERU9 68 aa1.09□□□□□ -2.23
LINC00400-201ENST00000425609 A0A0D9SG42 100 aa1.08□□□□□ -2.24
LINC00400-201ENST00000425609 A0A1B0GV90 55 aa1.08□□□□□ -2.24
LINC00400-201ENST00000425609 MT1EP04732 61 aa1.07□□□□□ -2.24
LINC00400-201ENST00000425609 KRTAP19-7Q3SYF9 63 aa1.07□□□□□ -2.24
LINC00400-201ENST00000425609 SERP2Q8N6R1 65 aa1.06□□□□□ -2.24
LINC00400-201ENST00000425609 TNP1P09430 55 aa1.05□□□□□ -2.24
LINC00400-201ENST00000425609 A0A1B0GU69 56 aa1.04□□□□□ -2.24
LINC00400-201ENST00000425609 KRTAP19-5Q3LI72 72 aa1.04□□□□□ -2.24
LINC00400-201ENST00000425609 C10orf95Q9H7T3 257 aa1.04□□□□□ -2.24
LINC00400-201ENST00000425609 MT4P47944 62 aa1.03□□□□□ -2.24
LINC00400-201ENST00000425609 SPATA8Q6RVD6 105 aa1.03□□□□□ -2.24
LINC00400-201ENST00000425609 MT1MQ8N339 61 aa1.03□□□□□ -2.24
LINC00400-201ENST00000425609 PRR15LQ9BU68 103 aa1.03□□□□□ -2.24
LINC00400-201ENST00000425609 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
LINC00400-201ENST00000425609 MT1LQ93083 61 aa1.02□□□□□ -2.25
LINC00400-201ENST00000425609 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
LINC00400-201ENST00000425609 H7BZZ5 65 aa0.98□□□□□ -2.25
LINC00400-201ENST00000425609 UQCR11O14957 56 aa0.97□□□□□ -2.25
LINC00400-201ENST00000425609 ATP5EP56381 51 aaPredicted RBP0.97□□□□□ -2.25
LINC00400-201ENST00000425609 KRTAP20-2Q3LI61 65 aa0.96□□□□□ -2.26
LINC00400-201ENST00000425609 LINC01558Q9Y6Z2 57 aa0.96□□□□□ -2.26
LINC00400-201ENST00000425609 SYNE1Q8NF91 8797 aaKnown RBP0.94□□□□□ -2.26
LINC00400-201ENST00000425609 AHNAKQ09666 5890 aaKnown RBP0.9□□□□□ -2.26
LINC00400-201ENST00000425609 CCDC179H3BU77 68 aa0.88□□□□□ -2.27
LINC00400-201ENST00000425609 MT1AP04731 61 aa0.88□□□□□ -2.27
LINC00400-201ENST00000425609 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
LINC00400-201ENST00000425609 KRTAP6-1Q3LI64 71 aa0.85□□□□□ -2.27
LINC00400-201ENST00000425609 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
LINC00400-201ENST00000425609 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
LINC00400-201ENST00000425609 KRTAP6-2Q3LI66 62 aa0.83□□□□□ -2.28
LINC00400-201ENST00000425609 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
LINC00400-201ENST00000425609 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
LINC00400-201ENST00000425609 PRM1P04553 51 aa0.41□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 49.7 ms