RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
ITSN1-211ENST00000399355 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
ITSN1-211ENST00000399355 LOC100996750A0A140TA64 210 aa4.19□□□□□ -1.74
ITSN1-211ENST00000399355 CRCT1Q9UGL9 99 aa4.18□□□□□ -1.74
ITSN1-211ENST00000399355 INE1O15225 51 aa4.07□□□□□ -1.76
ITSN1-211ENST00000399355 MT1EP04732 61 aa4.05□□□□□ -1.76
ITSN1-211ENST00000399355 MT1LQ93083 61 aa4.05□□□□□ -1.76
ITSN1-211ENST00000399355 MT1GP13640 62 aa4.01□□□□□ -1.77
ITSN1-211ENST00000399355 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
ITSN1-211ENST00000399355 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
ITSN1-211ENST00000399355 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
ITSN1-211ENST00000399355 MT1MQ8N339 61 aa3.8□□□□□ -1.8
ITSN1-211ENST00000399355 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
ITSN1-211ENST00000399355 KRTAP19-4Q3LI73 84 aa3.79□□□□□ -1.8
ITSN1-211ENST00000399355 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
ITSN1-211ENST00000399355 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
ITSN1-211ENST00000399355 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
ITSN1-211ENST00000399355 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
ITSN1-211ENST00000399355 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
ITSN1-211ENST00000399355 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
ITSN1-211ENST00000399355 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
ITSN1-211ENST00000399355 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
ITSN1-211ENST00000399355 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
ITSN1-211ENST00000399355 KRTAP9-2Q9BYQ4 174 aa3.63□□□□□ -1.83
ITSN1-211ENST00000399355 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
ITSN1-211ENST00000399355 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
ITSN1-211ENST00000399355 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
ITSN1-211ENST00000399355 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
ITSN1-211ENST00000399355 SPRR2EP22531 72 aa3.46□□□□□ -1.86
ITSN1-211ENST00000399355 SPRR2BP35325 72 aa3.46□□□□□ -1.86
ITSN1-211ENST00000399355 SPRR2AP35326 72 aa3.46□□□□□ -1.86
ITSN1-211ENST00000399355 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
ITSN1-211ENST00000399355 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
ITSN1-211ENST00000399355 KRTAP5-9P26371 169 aa3.28□□□□□ -1.89
ITSN1-211ENST00000399355 SPRR2DP22532 72 aa3.27□□□□□ -1.89
ITSN1-211ENST00000399355 MT1AP04731 61 aa3.26□□□□□ -1.89
ITSN1-211ENST00000399355 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
ITSN1-211ENST00000399355 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
ITSN1-211ENST00000399355 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
ITSN1-211ENST00000399355 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.21□□□□□ -1.9
ITSN1-211ENST00000399355 PRM1P04553 51 aa3.18□□□□□ -1.9
ITSN1-211ENST00000399355 NEBP20929 6669 aa3.18□□□□□ -1.9
ITSN1-211ENST00000399355 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
ITSN1-211ENST00000399355 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
ITSN1-211ENST00000399355 MT4P47944 62 aa3.14□□□□□ -1.91
ITSN1-211ENST00000399355 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
ITSN1-211ENST00000399355 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
ITSN1-211ENST00000399355 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.93
ITSN1-211ENST00000399355 KRTAP6-3Q3LI67 103 aa2.97□□□□□ -1.93
ITSN1-211ENST00000399355 MT3P25713 68 aa2.92□□□□□ -1.94
ITSN1-211ENST00000399355 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
ITSN1-211ENST00000399355 LCE1DQ5T752 114 aa2.81□□□□□ -1.96
ITSN1-211ENST00000399355 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
ITSN1-211ENST00000399355 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
ITSN1-211ENST00000399355 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
ITSN1-211ENST00000399355 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
ITSN1-211ENST00000399355 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
ITSN1-211ENST00000399355 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
ITSN1-211ENST00000399355 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
ITSN1-211ENST00000399355 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -2
ITSN1-211ENST00000399355 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
ITSN1-211ENST00000399355 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
ITSN1-211ENST00000399355 KRTAP4-2Q9BYR5 136 aa2.49□□□□□ -2.01
ITSN1-211ENST00000399355 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
ITSN1-211ENST00000399355 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
ITSN1-211ENST00000399355 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
ITSN1-211ENST00000399355 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
ITSN1-211ENST00000399355 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
ITSN1-211ENST00000399355 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
ITSN1-211ENST00000399355 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
ITSN1-211ENST00000399355 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
ITSN1-211ENST00000399355 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
ITSN1-211ENST00000399355 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
ITSN1-211ENST00000399355 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
ITSN1-211ENST00000399355 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
ITSN1-211ENST00000399355 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
ITSN1-211ENST00000399355 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 128.1 ms