RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.62
SREBF1-205ENST00000395757 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
SREBF1-205ENST00000395757 MT1GP13640 62 aa4.94□□□□□ -1.62
SREBF1-205ENST00000395757 MT1LQ93083 61 aa4.93□□□□□ -1.62
SREBF1-205ENST00000395757 MT1EP04732 61 aa4.92□□□□□ -1.62
SREBF1-205ENST00000395757 SYNE2Q8WXH0 6885 aaKnown RBP4.92□□□□□ -1.62
SREBF1-205ENST00000395757 MACF1Q9UPN3 7388 aaKnown RBP4.82□□□□□ -1.64
SREBF1-205ENST00000395757 KRTAP19-6Q3LI70 58 aa4.77□□□□□ -1.65
SREBF1-205ENST00000395757 LCE2DQ5TA82 110 aaPredicted RBP4.69□□□□□ -1.66
SREBF1-205ENST00000395757 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
SREBF1-205ENST00000395757 KRTAP19-3Q7Z4W3 81 aa4.67□□□□□ -1.66
SREBF1-205ENST00000395757 MT1MQ8N339 61 aa4.66□□□□□ -1.66
SREBF1-205ENST00000395757 MDN1Q9NU22 5596 aa4.63□□□□□ -1.67
SREBF1-205ENST00000395757 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
SREBF1-205ENST00000395757 KRTAP12-4P60329 112 aa4.54□□□□□ -1.68
SREBF1-205ENST00000395757 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
SREBF1-205ENST00000395757 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
SREBF1-205ENST00000395757 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
SREBF1-205ENST00000395757 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
SREBF1-205ENST00000395757 SPRR2EP22531 72 aa4.47□□□□□ -1.69
SREBF1-205ENST00000395757 SPRR2BP35325 72 aa4.47□□□□□ -1.69
SREBF1-205ENST00000395757 SPRR2AP35326 72 aa4.47□□□□□ -1.69
SREBF1-205ENST00000395757 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
SREBF1-205ENST00000395757 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
SREBF1-205ENST00000395757 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
SREBF1-205ENST00000395757 LCE1EQ5T753 118 aa4.34□□□□□ -1.72
SREBF1-205ENST00000395757 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
SREBF1-205ENST00000395757 SPRR2DP22532 72 aa4.24□□□□□ -1.73
SREBF1-205ENST00000395757 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
SREBF1-205ENST00000395757 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
SREBF1-205ENST00000395757 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
SREBF1-205ENST00000395757 PRM1P04553 51 aa4.15□□□□□ -1.75
SREBF1-205ENST00000395757 MT1AP04731 61 aa4.08□□□□□ -1.76
SREBF1-205ENST00000395757 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
SREBF1-205ENST00000395757 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
SREBF1-205ENST00000395757 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
SREBF1-205ENST00000395757 MUC19Q7Z5P9 8384 aa4.07□□□□□ -1.76
SREBF1-205ENST00000395757 KRTAP9-7A8MTY7 169 aa4.04□□□□□ -1.76
SREBF1-205ENST00000395757 MT4P47944 62 aa3.98□□□□□ -1.77
SREBF1-205ENST00000395757 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.96□□□□□ -1.78
SREBF1-205ENST00000395757 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
SREBF1-205ENST00000395757 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
SREBF1-205ENST00000395757 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
SREBF1-205ENST00000395757 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
SREBF1-205ENST00000395757 MT3P25713 68 aa3.82□□□□□ -1.8
SREBF1-205ENST00000395757 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
SREBF1-205ENST00000395757 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
SREBF1-205ENST00000395757 NEBP20929 6669 aa3.69□□□□□ -1.82
SREBF1-205ENST00000395757 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
SREBF1-205ENST00000395757 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
SREBF1-205ENST00000395757 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.86
SREBF1-205ENST00000395757 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
SREBF1-205ENST00000395757 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
SREBF1-205ENST00000395757 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
SREBF1-205ENST00000395757 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
SREBF1-205ENST00000395757 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
SREBF1-205ENST00000395757 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
SREBF1-205ENST00000395757 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
SREBF1-205ENST00000395757 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.93
SREBF1-205ENST00000395757 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
SREBF1-205ENST00000395757 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.95
SREBF1-205ENST00000395757 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
SREBF1-205ENST00000395757 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
SREBF1-205ENST00000395757 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
SREBF1-205ENST00000395757 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
SREBF1-205ENST00000395757 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
SREBF1-205ENST00000395757 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
SREBF1-205ENST00000395757 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
SREBF1-205ENST00000395757 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
SREBF1-205ENST00000395757 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
SREBF1-205ENST00000395757 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
SREBF1-205ENST00000395757 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
SREBF1-205ENST00000395757 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.05
SREBF1-205ENST00000395757 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
SREBF1-205ENST00000395757 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
SREBF1-205ENST00000395757 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
SREBF1-205ENST00000395757 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 87.1 ms