RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 LCE2AQ5TA79 106 aaPredicted RBP5.73□□□□□ -1.49
SIPA1-201ENST00000394224 MT1GP13640 62 aa5.68□□□□□ -1.5
SIPA1-201ENST00000394224 SYNE2Q8WXH0 6885 aaKnown RBP5.68□□□□□ -1.5
SIPA1-201ENST00000394224 MT1LQ93083 61 aa5.64□□□□□ -1.51
SIPA1-201ENST00000394224 MT1EP04732 61 aa5.59□□□□□ -1.52
SIPA1-201ENST00000394224 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
SIPA1-201ENST00000394224 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
SIPA1-201ENST00000394224 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
SIPA1-201ENST00000394224 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
SIPA1-201ENST00000394224 MACF1Q9UPN3 7388 aaKnown RBP5.44□□□□□ -1.54
SIPA1-201ENST00000394224 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
SIPA1-201ENST00000394224 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
SIPA1-201ENST00000394224 LCE2DQ5TA82 110 aaPredicted RBP5.34□□□□□ -1.56
SIPA1-201ENST00000394224 MDN1Q9NU22 5596 aa5.33□□□□□ -1.56
SIPA1-201ENST00000394224 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
SIPA1-201ENST00000394224 MT1MQ8N339 61 aa5.24□□□□□ -1.57
SIPA1-201ENST00000394224 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
SIPA1-201ENST00000394224 KRTAP19-6Q3LI70 58 aa5.09□□□□□ -1.6
SIPA1-201ENST00000394224 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
SIPA1-201ENST00000394224 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.62
SIPA1-201ENST00000394224 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
SIPA1-201ENST00000394224 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
SIPA1-201ENST00000394224 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
SIPA1-201ENST00000394224 PRM1P04553 51 aa4.85□□□□□ -1.63
SIPA1-201ENST00000394224 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
SIPA1-201ENST00000394224 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
SIPA1-201ENST00000394224 SPRR2EP22531 72 aa4.67□□□□□ -1.66
SIPA1-201ENST00000394224 SPRR2BP35325 72 aa4.67□□□□□ -1.66
SIPA1-201ENST00000394224 SPRR2AP35326 72 aa4.67□□□□□ -1.66
SIPA1-201ENST00000394224 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
SIPA1-201ENST00000394224 MT1AP04731 61 aa4.59□□□□□ -1.68
SIPA1-201ENST00000394224 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
SIPA1-201ENST00000394224 KRTAP6-2Q3LI66 62 aa4.55□□□□□ -1.68
SIPA1-201ENST00000394224 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
SIPA1-201ENST00000394224 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.69
SIPA1-201ENST00000394224 SPRR2DP22532 72 aa4.41□□□□□ -1.7
SIPA1-201ENST00000394224 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
SIPA1-201ENST00000394224 MUC19Q7Z5P9 8384 aa4.29□□□□□ -1.72
SIPA1-201ENST00000394224 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
SIPA1-201ENST00000394224 MT4P47944 62 aa4.24□□□□□ -1.73
SIPA1-201ENST00000394224 NEBP20929 6669 aa4.23□□□□□ -1.73
SIPA1-201ENST00000394224 MT3P25713 68 aa4.21□□□□□ -1.74
SIPA1-201ENST00000394224 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
SIPA1-201ENST00000394224 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.76
SIPA1-201ENST00000394224 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
SIPA1-201ENST00000394224 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
SIPA1-201ENST00000394224 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
SIPA1-201ENST00000394224 HMCN1Q96RW7 5635 aa3.94□□□□□ -1.78
SIPA1-201ENST00000394224 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
SIPA1-201ENST00000394224 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
SIPA1-201ENST00000394224 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
SIPA1-201ENST00000394224 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
SIPA1-201ENST00000394224 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
SIPA1-201ENST00000394224 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
SIPA1-201ENST00000394224 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
SIPA1-201ENST00000394224 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
SIPA1-201ENST00000394224 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
SIPA1-201ENST00000394224 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.87
SIPA1-201ENST00000394224 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
SIPA1-201ENST00000394224 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
SIPA1-201ENST00000394224 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
SIPA1-201ENST00000394224 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
SIPA1-201ENST00000394224 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
SIPA1-201ENST00000394224 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
SIPA1-201ENST00000394224 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
SIPA1-201ENST00000394224 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
SIPA1-201ENST00000394224 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
SIPA1-201ENST00000394224 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
SIPA1-201ENST00000394224 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
SIPA1-201ENST00000394224 KRTAP5-8O75690 187 aa2.9□□□□□ -1.94
SIPA1-201ENST00000394224 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
SIPA1-201ENST00000394224 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
SIPA1-201ENST00000394224 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
SIPA1-201ENST00000394224 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
SIPA1-201ENST00000394224 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
SIPA1-201ENST00000394224 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
SIPA1-201ENST00000394224 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 152.8 ms