RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 MT3P25713 68 aa3.77□□□□□ -1.81
FANCA-202ENST00000389301 HMCN2Q8NDA2 5059 aa3.74□□□□□ -1.81
FANCA-202ENST00000389301 LCE2DQ5TA82 110 aaPredicted RBP3.73□□□□□ -1.81
FANCA-202ENST00000389301 RNF213Q63HN8 5207 aa3.72□□□□□ -1.81
FANCA-202ENST00000389301 FAT4Q6V0I7 4981 aa3.67□□□□□ -1.82
FANCA-202ENST00000389301 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
FANCA-202ENST00000389301 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
FANCA-202ENST00000389301 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
FANCA-202ENST00000389301 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.82
FANCA-202ENST00000389301 MT4P47944 62 aa3.64□□□□□ -1.83
FANCA-202ENST00000389301 LCE2AQ5TA79 106 aaPredicted RBP3.63□□□□□ -1.83
FANCA-202ENST00000389301 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
FANCA-202ENST00000389301 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
FANCA-202ENST00000389301 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
FANCA-202ENST00000389301 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
FANCA-202ENST00000389301 UBR4Q5T4S7 5183 aa3.58□□□□□ -1.84
FANCA-202ENST00000389301 MT1AP04731 61 aa3.58□□□□□ -1.84
FANCA-202ENST00000389301 MUC2Q02817 5179 aa3.55□□□□□ -1.84
FANCA-202ENST00000389301 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
FANCA-202ENST00000389301 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
FANCA-202ENST00000389301 KRTAP9-2Q9BYQ4 174 aa3.46□□□□□ -1.86
FANCA-202ENST00000389301 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
FANCA-202ENST00000389301 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
FANCA-202ENST00000389301 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
FANCA-202ENST00000389301 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
FANCA-202ENST00000389301 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
FANCA-202ENST00000389301 LCE5AQ5TCM9 118 aa3.34□□□□□ -1.87
FANCA-202ENST00000389301 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
FANCA-202ENST00000389301 KRTAP9-4Q9BYQ2 154 aa3.29□□□□□ -1.88
FANCA-202ENST00000389301 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
FANCA-202ENST00000389301 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
FANCA-202ENST00000389301 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
FANCA-202ENST00000389301 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
FANCA-202ENST00000389301 USH2AO75445 5202 aa3.14□□□□□ -1.91
FANCA-202ENST00000389301 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
FANCA-202ENST00000389301 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
FANCA-202ENST00000389301 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
FANCA-202ENST00000389301 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
FANCA-202ENST00000389301 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
FANCA-202ENST00000389301 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
FANCA-202ENST00000389301 FCGBPQ9Y6R7 5405 aaPredicted RBP2.98□□□□□ -1.93
FANCA-202ENST00000389301 KMT2DO14686 5537 aa2.98□□□□□ -1.93
FANCA-202ENST00000389301 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
FANCA-202ENST00000389301 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
FANCA-202ENST00000389301 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
FANCA-202ENST00000389301 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.95
FANCA-202ENST00000389301 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
FANCA-202ENST00000389301 MUC12Q9UKN1 5478 aa2.69□□□□□ -1.98
FANCA-202ENST00000389301 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.98
FANCA-202ENST00000389301 NEBP20929 6669 aa2.65□□□□□ -1.98
FANCA-202ENST00000389301 KRTAP4-6Q9BYQ5 205 aa2.64□□□□□ -1.99
FANCA-202ENST00000389301 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
FANCA-202ENST00000389301 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
FANCA-202ENST00000389301 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
FANCA-202ENST00000389301 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
FANCA-202ENST00000389301 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
FANCA-202ENST00000389301 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
FANCA-202ENST00000389301 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
FANCA-202ENST00000389301 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
FANCA-202ENST00000389301 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
FANCA-202ENST00000389301 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
FANCA-202ENST00000389301 KRTAP5-3Q6L8H2 238 aa2.05□□□□□ -2.08
FANCA-202ENST00000389301 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
FANCA-202ENST00000389301 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
FANCA-202ENST00000389301 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
FANCA-202ENST00000389301 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
FANCA-202ENST00000389301 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
FANCA-202ENST00000389301 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
FANCA-202ENST00000389301 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
FANCA-202ENST00000389301 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
FANCA-202ENST00000389301 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
FANCA-202ENST00000389301 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
FANCA-202ENST00000389301 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
FANCA-202ENST00000389301 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
FANCA-202ENST00000389301 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.16
FANCA-202ENST00000389301 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
FANCA-202ENST00000389301 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 85.7 ms