RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 SPRR5A0A1B0GTR4 108 aa1.68□□□□□ -2.14
LTN1-202ENST00000389194 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
LTN1-202ENST00000389194 DSTQ03001 7570 aaKnown RBP1.68□□□□□ -2.14
LTN1-202ENST00000389194 KMT2DO14686 5537 aa1.67□□□□□ -2.14
LTN1-202ENST00000389194 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
LTN1-202ENST00000389194 KRTAP19-4Q3LI73 84 aa1.66□□□□□ -2.14
LTN1-202ENST00000389194 SPRR2DP22532 72 aa1.64□□□□□ -2.15
LTN1-202ENST00000389194 MT1LQ93083 61 aa1.62□□□□□ -2.15
LTN1-202ENST00000389194 LCE2AQ5TA79 106 aaPredicted RBP1.61□□□□□ -2.15
LTN1-202ENST00000389194 USH2AO75445 5202 aa1.61□□□□□ -2.15
LTN1-202ENST00000389194 KRTAP4-9Q9BYQ8 210 aa1.61□□□□□ -2.15
LTN1-202ENST00000389194 MT1EP04732 61 aa1.61□□□□□ -2.15
LTN1-202ENST00000389194 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
LTN1-202ENST00000389194 KRTAP19-3Q7Z4W3 81 aa1.59□□□□□ -2.15
LTN1-202ENST00000389194 MT4P47944 62 aa1.56□□□□□ -2.16
LTN1-202ENST00000389194 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
LTN1-202ENST00000389194 LCE3EQ5T5B0 92 aa1.56□□□□□ -2.16
LTN1-202ENST00000389194 MT1MQ8N339 61 aa1.55□□□□□ -2.16
LTN1-202ENST00000389194 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
LTN1-202ENST00000389194 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
LTN1-202ENST00000389194 PRM1P04553 51 aa1.53□□□□□ -2.16
LTN1-202ENST00000389194 KRTAP9-6A8MVA2 160 aa1.52□□□□□ -2.17
LTN1-202ENST00000389194 KRTAP9-2Q9BYQ4 174 aa1.5□□□□□ -2.17
LTN1-202ENST00000389194 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
LTN1-202ENST00000389194 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
LTN1-202ENST00000389194 LCE1DQ5T752 114 aa1.48□□□□□ -2.17
LTN1-202ENST00000389194 MUC12Q9UKN1 5478 aa1.47□□□□□ -2.17
LTN1-202ENST00000389194 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
LTN1-202ENST00000389194 KRTAP2-3P0C7H8 128 aa1.44□□□□□ -2.18
LTN1-202ENST00000389194 KRTAP2-4Q9BYR9 128 aa1.44□□□□□ -2.18
LTN1-202ENST00000389194 KRTAP2-1Q9BYU5 128 aa1.44□□□□□ -2.18
LTN1-202ENST00000389194 SSPOA2VEC9 5147 aa1.43□□□□□ -2.18
LTN1-202ENST00000389194 MT3P25713 68 aa1.43□□□□□ -2.18
LTN1-202ENST00000389194 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
LTN1-202ENST00000389194 KRTAP9-7A8MTY7 169 aa1.4□□□□□ -2.19
LTN1-202ENST00000389194 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.4□□□□□ -2.19
LTN1-202ENST00000389194 KRTAP6-2Q3LI66 62 aa1.39□□□□□ -2.19
LTN1-202ENST00000389194 MT1AP04731 61 aa1.38□□□□□ -2.19
LTN1-202ENST00000389194 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
LTN1-202ENST00000389194 LCE5AQ5TCM9 118 aa1.35□□□□□ -2.19
LTN1-202ENST00000389194 KRTAP9-6A0A140TA67 174 aa1.33□□□□□ -2.2
LTN1-202ENST00000389194 LCE1AQ5T7P2 110 aa1.33□□□□□ -2.2
LTN1-202ENST00000389194 KRTAP9-4Q9BYQ2 154 aa1.29□□□□□ -2.2
LTN1-202ENST00000389194 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.28□□□□□ -2.2
LTN1-202ENST00000389194 MDN1Q9NU22 5596 aa1.28□□□□□ -2.21
LTN1-202ENST00000389194 KRTAP20-1Q3LI63 56 aa1.24□□□□□ -2.21
LTN1-202ENST00000389194 KRTAP9-9Q9BYP9 154 aa1.23□□□□□ -2.21
LTN1-202ENST00000389194 KRTAP4-6Q9BYQ5 205 aa1.23□□□□□ -2.21
LTN1-202ENST00000389194 KRTAP6-3Q3LI67 103 aa1.22□□□□□ -2.21
LTN1-202ENST00000389194 LCE1CQ5T751 118 aa1.21□□□□□ -2.21
LTN1-202ENST00000389194 LCE1EQ5T753 118 aa1.21□□□□□ -2.21
LTN1-202ENST00000389194 LCE1FQ5T754 118 aa1.21□□□□□ -2.21
LTN1-202ENST00000389194 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
LTN1-202ENST00000389194 KRTAP2-2Q9BYT5 123 aa1.19□□□□□ -2.22
LTN1-202ENST00000389194 KRTAP4-11Q9BYQ6 195 aa1.19□□□□□ -2.22
LTN1-202ENST00000389194 NEBP20929 6669 aa1.19□□□□□ -2.22
LTN1-202ENST00000389194 KRTAP4-4Q9BYR3 166 aa1.16□□□□□ -2.22
LTN1-202ENST00000389194 LCE4AQ5TA78 99 aa1.14□□□□□ -2.23
LTN1-202ENST00000389194 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
LTN1-202ENST00000389194 KRTAP4-12Q9BQ66 201 aa1.11□□□□□ -2.23
LTN1-202ENST00000389194 KRTAP4-2Q9BYR5 136 aa1.11□□□□□ -2.23
LTN1-202ENST00000389194 KRTAP5-9P26371 169 aa1.1□□□□□ -2.23
LTN1-202ENST00000389194 KRTAP5-5Q701N2 237 aaPredicted RBP1.1□□□□□ -2.23
LTN1-202ENST00000389194 KRTAP20-2Q3LI61 65 aa1.09□□□□□ -2.24
LTN1-202ENST00000389194 GPR98Q8WXG9 6306 aa1.05□□□□□ -2.24
LTN1-202ENST00000389194 KRTAP5-4Q6L8H1 288 aa0.99□□□□□ -2.25
LTN1-202ENST00000389194 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
LTN1-202ENST00000389194 KRTAP5-3Q6L8H2 238 aa0.87□□□□□ -2.27
LTN1-202ENST00000389194 KRTAP5-8O75690 187 aa0.86□□□□□ -2.27
LTN1-202ENST00000389194 KRTAP5-1Q6L8H4 278 aa0.86□□□□□ -2.27
LTN1-202ENST00000389194 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.28
LTN1-202ENST00000389194 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
LTN1-202ENST00000389194 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
LTN1-202ENST00000389194 KRTAP5-11Q6L8G4 156 aa0.69□□□□□ -2.3
LTN1-202ENST00000389194 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
LTN1-202ENST00000389194 KRTAP5-7Q6L8G8 165 aa0.65□□□□□ -2.3
LTN1-202ENST00000389194 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 83 ms