RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 KRTAP19-7Q3SYF9 63 aa5.56□□□□□ -1.52
BRF1-203ENST00000379937 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
BRF1-203ENST00000379937 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
BRF1-203ENST00000379937 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
BRF1-203ENST00000379937 MT1GP13640 62 aa5.44□□□□□ -1.54
BRF1-203ENST00000379937 MT1EP04732 61 aa5.39□□□□□ -1.55
BRF1-203ENST00000379937 MT1LQ93083 61 aa5.37□□□□□ -1.55
BRF1-203ENST00000379937 LCE2DQ5TA82 110 aaPredicted RBP5.31□□□□□ -1.56
BRF1-203ENST00000379937 KRTAP19-6Q3LI70 58 aa5.3□□□□□ -1.56
BRF1-203ENST00000379937 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
BRF1-203ENST00000379937 INE1O15225 51 aa5.21□□□□□ -1.58
BRF1-203ENST00000379937 MT1MQ8N339 61 aa5.09□□□□□ -1.59
BRF1-203ENST00000379937 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.59
BRF1-203ENST00000379937 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
BRF1-203ENST00000379937 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
BRF1-203ENST00000379937 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
BRF1-203ENST00000379937 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
BRF1-203ENST00000379937 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
BRF1-203ENST00000379937 SPRR2EP22531 72 aa4.95□□□□□ -1.62
BRF1-203ENST00000379937 SPRR2BP35325 72 aa4.95□□□□□ -1.62
BRF1-203ENST00000379937 SPRR2AP35326 72 aa4.95□□□□□ -1.62
BRF1-203ENST00000379937 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.62
BRF1-203ENST00000379937 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
BRF1-203ENST00000379937 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
BRF1-203ENST00000379937 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
BRF1-203ENST00000379937 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
BRF1-203ENST00000379937 SPRR2DP22532 72 aa4.68□□□□□ -1.66
BRF1-203ENST00000379937 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.6□□□□□ -1.67
BRF1-203ENST00000379937 KRTAP9-6A0A140TA67 174 aa4.52□□□□□ -1.69
BRF1-203ENST00000379937 MT4P47944 62 aa4.5□□□□□ -1.69
BRF1-203ENST00000379937 NEBP20929 6669 aa4.45□□□□□ -1.7
BRF1-203ENST00000379937 KRTAP5-9P26371 169 aa4.41□□□□□ -1.7
BRF1-203ENST00000379937 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
BRF1-203ENST00000379937 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
BRF1-203ENST00000379937 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
BRF1-203ENST00000379937 MT1AP04731 61 aa4.36□□□□□ -1.71
BRF1-203ENST00000379937 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
BRF1-203ENST00000379937 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
BRF1-203ENST00000379937 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
BRF1-203ENST00000379937 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
BRF1-203ENST00000379937 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
BRF1-203ENST00000379937 PRM1P04553 51 aa4.18□□□□□ -1.74
BRF1-203ENST00000379937 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.74
BRF1-203ENST00000379937 MUC19Q7Z5P9 8384 aa4.11□□□□□ -1.75
BRF1-203ENST00000379937 MT3P25713 68 aa4.03□□□□□ -1.76
BRF1-203ENST00000379937 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
BRF1-203ENST00000379937 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
BRF1-203ENST00000379937 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
BRF1-203ENST00000379937 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
BRF1-203ENST00000379937 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
BRF1-203ENST00000379937 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
BRF1-203ENST00000379937 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
BRF1-203ENST00000379937 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
BRF1-203ENST00000379937 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
BRF1-203ENST00000379937 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
BRF1-203ENST00000379937 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
BRF1-203ENST00000379937 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
BRF1-203ENST00000379937 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
BRF1-203ENST00000379937 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
BRF1-203ENST00000379937 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
BRF1-203ENST00000379937 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
BRF1-203ENST00000379937 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
BRF1-203ENST00000379937 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
BRF1-203ENST00000379937 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
BRF1-203ENST00000379937 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
BRF1-203ENST00000379937 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
BRF1-203ENST00000379937 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
BRF1-203ENST00000379937 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
BRF1-203ENST00000379937 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
BRF1-203ENST00000379937 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
BRF1-203ENST00000379937 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
BRF1-203ENST00000379937 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
BRF1-203ENST00000379937 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
BRF1-203ENST00000379937 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
BRF1-203ENST00000379937 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
BRF1-203ENST00000379937 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
BRF1-203ENST00000379937 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms