RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
NCDN-203ENST00000373253 LCE2DQ5TA82 110 aaPredicted RBP4.56□□□□□ -1.68
NCDN-203ENST00000373253 MT1GP13640 62 aa4.56□□□□□ -1.68
NCDN-203ENST00000373253 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
NCDN-203ENST00000373253 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
NCDN-203ENST00000373253 MT1EP04732 61 aa4.53□□□□□ -1.68
NCDN-203ENST00000373253 MT1LQ93083 61 aa4.52□□□□□ -1.69
NCDN-203ENST00000373253 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
NCDN-203ENST00000373253 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
NCDN-203ENST00000373253 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
NCDN-203ENST00000373253 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.72
NCDN-203ENST00000373253 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
NCDN-203ENST00000373253 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
NCDN-203ENST00000373253 MT1MQ8N339 61 aa4.3□□□□□ -1.72
NCDN-203ENST00000373253 SPRR2EP22531 72 aa4.24□□□□□ -1.73
NCDN-203ENST00000373253 SPRR2BP35325 72 aa4.24□□□□□ -1.73
NCDN-203ENST00000373253 SPRR2AP35326 72 aa4.24□□□□□ -1.73
NCDN-203ENST00000373253 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
NCDN-203ENST00000373253 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
NCDN-203ENST00000373253 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
NCDN-203ENST00000373253 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
NCDN-203ENST00000373253 KRTAP2-1Q9BYU5 128 aa4.07□□□□□ -1.76
NCDN-203ENST00000373253 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
NCDN-203ENST00000373253 SPRR2DP22532 72 aa4.03□□□□□ -1.76
NCDN-203ENST00000373253 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
NCDN-203ENST00000373253 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
NCDN-203ENST00000373253 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
NCDN-203ENST00000373253 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
NCDN-203ENST00000373253 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
NCDN-203ENST00000373253 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
NCDN-203ENST00000373253 MT4P47944 62 aa3.79□□□□□ -1.8
NCDN-203ENST00000373253 MT1AP04731 61 aa3.76□□□□□ -1.81
NCDN-203ENST00000373253 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
NCDN-203ENST00000373253 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
NCDN-203ENST00000373253 PRM1P04553 51 aa3.68□□□□□ -1.82
NCDN-203ENST00000373253 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
NCDN-203ENST00000373253 KRTAP9-7A8MTY7 169 aa3.65□□□□□ -1.82
NCDN-203ENST00000373253 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
NCDN-203ENST00000373253 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
NCDN-203ENST00000373253 MT3P25713 68 aa3.55□□□□□ -1.84
NCDN-203ENST00000373253 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
NCDN-203ENST00000373253 NEBP20929 6669 aa3.5□□□□□ -1.85
NCDN-203ENST00000373253 KRTAP4-6Q9BYQ5 205 aa3.49□□□□□ -1.85
NCDN-203ENST00000373253 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
NCDN-203ENST00000373253 LCE1DQ5T752 114 aa3.4□□□□□ -1.87
NCDN-203ENST00000373253 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.88
NCDN-203ENST00000373253 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
NCDN-203ENST00000373253 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
NCDN-203ENST00000373253 KRTAP20-1Q3LI63 56 aa3.22□□□□□ -1.89
NCDN-203ENST00000373253 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
NCDN-203ENST00000373253 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
NCDN-203ENST00000373253 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
NCDN-203ENST00000373253 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
NCDN-203ENST00000373253 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
NCDN-203ENST00000373253 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
NCDN-203ENST00000373253 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
NCDN-203ENST00000373253 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
NCDN-203ENST00000373253 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
NCDN-203ENST00000373253 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
NCDN-203ENST00000373253 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
NCDN-203ENST00000373253 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
NCDN-203ENST00000373253 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
NCDN-203ENST00000373253 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
NCDN-203ENST00000373253 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
NCDN-203ENST00000373253 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
NCDN-203ENST00000373253 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
NCDN-203ENST00000373253 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
NCDN-203ENST00000373253 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
NCDN-203ENST00000373253 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
NCDN-203ENST00000373253 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
NCDN-203ENST00000373253 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
NCDN-203ENST00000373253 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
NCDN-203ENST00000373253 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
NCDN-203ENST00000373253 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
NCDN-203ENST00000373253 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
NCDN-203ENST00000373253 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
NCDN-203ENST00000373253 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 91.3 ms