RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 H0YAA0 97 aa2.34□□□□□ -2.03
ECHDC1-204ENST00000368292 PRO0255Q9UI72 69 aa2.34□□□□□ -2.03
ECHDC1-204ENST00000368292 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
ECHDC1-204ENST00000368292 WFDC13Q8IUB5 93 aa2.33□□□□□ -2.04
ECHDC1-204ENST00000368292 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
ECHDC1-204ENST00000368292 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
ECHDC1-204ENST00000368292 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
ECHDC1-204ENST00000368292 IGLV5-48A0A075B6I7 105 aa2.3□□□□□ -2.04
ECHDC1-204ENST00000368292 KRTAP19-6Q3LI70 58 aa2.3□□□□□ -2.04
ECHDC1-204ENST00000368292 KRTAP13-4Q3LI77 160 aa2.29□□□□□ -2.04
ECHDC1-204ENST00000368292 M0R2T5 61 aa2.28□□□□□ -2.04
ECHDC1-204ENST00000368292 C10orf95Q9H7T3 257 aa2.27□□□□□ -2.05
ECHDC1-204ENST00000368292 COX6A2Q02221 97 aa2.26□□□□□ -2.05
ECHDC1-204ENST00000368292 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
ECHDC1-204ENST00000368292 M0QY20 66 aa2.25□□□□□ -2.05
ECHDC1-204ENST00000368292 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
ECHDC1-204ENST00000368292 KRTAP10-10P60014 251 aa2.24□□□□□ -2.05
ECHDC1-204ENST00000368292 H1FX-AS1Q4G0G2 97 aa2.24□□□□□ -2.05
ECHDC1-204ENST00000368292 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
ECHDC1-204ENST00000368292 A0A096LNI7 61 aa2.22□□□□□ -2.05
ECHDC1-204ENST00000368292 MMP24-AS1A0A0U1RRL7 71 aa2.19□□□□□ -2.06
ECHDC1-204ENST00000368292 MT2AP02795 61 aa2.19□□□□□ -2.06
ECHDC1-204ENST00000368292 MT1FP04733 61 aa2.19□□□□□ -2.06
ECHDC1-204ENST00000368292 CLPSL2Q6UWE3 100 aa2.15□□□□□ -2.07
ECHDC1-204ENST00000368292 TOMM7Q9P0U1 55 aa2.15□□□□□ -2.07
ECHDC1-204ENST00000368292 SPRR1AP35321 89 aa2.14□□□□□ -2.07
ECHDC1-204ENST00000368292 DEFB105AQ8NG35 78 aa2.13□□□□□ -2.07
ECHDC1-204ENST00000368292 SPRR2EP22531 72 aa2.08□□□□□ -2.08
ECHDC1-204ENST00000368292 SPRR2BP35325 72 aa2.08□□□□□ -2.08
ECHDC1-204ENST00000368292 SPRR2AP35326 72 aa2.08□□□□□ -2.08
ECHDC1-204ENST00000368292 PRLHP81277 87 aa2.08□□□□□ -2.08
ECHDC1-204ENST00000368292 KRTAP12-1P59990 96 aa2.07□□□□□ -2.08
ECHDC1-204ENST00000368292 SPRR1BP22528 89 aa2.06□□□□□ -2.08
ECHDC1-204ENST00000368292 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
ECHDC1-204ENST00000368292 S4R3F8 94 aa2.03□□□□□ -2.08
ECHDC1-204ENST00000368292 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
ECHDC1-204ENST00000368292 SPRR2DP22532 72 aa2.01□□□□□ -2.09
ECHDC1-204ENST00000368292 DSTQ03001 7570 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-204ENST00000368292 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
ECHDC1-204ENST00000368292 SPRR2FQ96RM1 72 aa2□□□□□ -2.09
ECHDC1-204ENST00000368292 KRTAP13-1Q8IUC0 172 aa1.97□□□□□ -2.09
ECHDC1-204ENST00000368292 C9orf92A6NGG3 77 aa1.96□□□□□ -2.1
ECHDC1-204ENST00000368292 SPINK1P00995 79 aa1.96□□□□□ -2.1
ECHDC1-204ENST00000368292 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
ECHDC1-204ENST00000368292 A0A0D9SG42 100 aa1.9□□□□□ -2.11
ECHDC1-204ENST00000368292 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
ECHDC1-204ENST00000368292 RPS29P62273 56 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-204ENST00000368292 MT1BP07438 61 aa1.88□□□□□ -2.11
ECHDC1-204ENST00000368292 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
ECHDC1-204ENST00000368292 MT4P47944 62 aa1.83□□□□□ -2.12
ECHDC1-204ENST00000368292 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
ECHDC1-204ENST00000368292 KRTAP8-1Q8IUC2 63 aa1.81□□□□□ -2.12
ECHDC1-204ENST00000368292 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
ECHDC1-204ENST00000368292 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-204ENST00000368292 M0QZ58 72 aa1.76□□□□□ -2.13
ECHDC1-204ENST00000368292 KRTAP19-8Q3LI54 63 aa1.76□□□□□ -2.13
ECHDC1-204ENST00000368292 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-204ENST00000368292 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
ECHDC1-204ENST00000368292 SPRR2GQ9BYE4 73 aa1.68□□□□□ -2.14
ECHDC1-204ENST00000368292 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
ECHDC1-204ENST00000368292 MT1XP80297 61 aa1.63□□□□□ -2.15
ECHDC1-204ENST00000368292 TNP1P09430 55 aa1.6□□□□□ -2.15
ECHDC1-204ENST00000368292 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
ECHDC1-204ENST00000368292 KRTAP19-3Q7Z4W3 81 aa1.54□□□□□ -2.16
ECHDC1-204ENST00000368292 MT1EP04732 61 aa1.47□□□□□ -2.17
ECHDC1-204ENST00000368292 KRTAP19-7Q3SYF9 63 aa1.47□□□□□ -2.17
ECHDC1-204ENST00000368292 SYNE1Q8NF91 8797 aaKnown RBP1.45□□□□□ -2.18
ECHDC1-204ENST00000368292 MT1MQ8N339 61 aa1.43□□□□□ -2.18
ECHDC1-204ENST00000368292 MT1GP13640 62 aa1.41□□□□□ -2.18
ECHDC1-204ENST00000368292 PRM1P04553 51 aa1.34□□□□□ -2.19
ECHDC1-204ENST00000368292 MT1LQ93083 61 aa1.32□□□□□ -2.2
ECHDC1-204ENST00000368292 KRTAP19-5Q3LI72 72 aa1.27□□□□□ -2.21
ECHDC1-204ENST00000368292 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
ECHDC1-204ENST00000368292 KRTAP6-2Q3LI66 62 aa1.18□□□□□ -2.22
ECHDC1-204ENST00000368292 KRTAP6-1Q3LI64 71 aa1.15□□□□□ -2.23
ECHDC1-204ENST00000368292 MT1AP04731 61 aa1.11□□□□□ -2.23
ECHDC1-204ENST00000368292 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
ECHDC1-204ENST00000368292 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 173.3 ms