RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 F8P00451 2351 aa0.54□□□□□ -2.32
SMARCAD1-202ENST00000359052 ACACAQ13085 2346 aa0.54□□□□□ -2.32
SMARCAD1-202ENST00000359052 H7C2G1 150 aa0.54□□□□□ -2.32
SMARCAD1-202ENST00000359052 CRPP02741 224 aa0.54□□□□□ -2.32
SMARCAD1-202ENST00000359052 KRTAP21-2Q3LI59 83 aa0.54□□□□□ -2.32
SMARCAD1-202ENST00000359052 A6NED7 52 aa0.54□□□□□ -2.32
SMARCAD1-202ENST00000359052 KRTAP19-7Q3SYF9 63 aa0.54□□□□□ -2.32
SMARCAD1-202ENST00000359052 MT1FP04733 61 aa0.54□□□□□ -2.32
SMARCAD1-202ENST00000359052 LCE3AQ5TA76 89 aa0.54□□□□□ -2.32
SMARCAD1-202ENST00000359052 SPAG11AQ6PDA7 123 aa0.54□□□□□ -2.32
SMARCAD1-202ENST00000359052 MRPL34Q9BQ48 92 aaKnown RBP0.54□□□□□ -2.32
SMARCAD1-202ENST00000359052 RIF1Q5UIP0 2472 aaKnown RBP0.53□□□□□ -2.32
SMARCAD1-202ENST00000359052 MT2AP02795 61 aa0.53□□□□□ -2.32
SMARCAD1-202ENST00000359052 KRTAP21-1Q3LI58 79 aa0.53□□□□□ -2.32
SMARCAD1-202ENST00000359052 DEFB130BP0DP73 79 aa0.53□□□□□ -2.33
SMARCAD1-202ENST00000359052 DEFB130AP0DP74 79 aa0.53□□□□□ -2.33
SMARCAD1-202ENST00000359052 LINC01556Q5JQF7 62 aa0.53□□□□□ -2.33
SMARCAD1-202ENST00000359052 MRPL33O75394 65 aaKnown RBP0.52□□□□□ -2.33
SMARCAD1-202ENST00000359052 RPL37P61927 97 aaKnown RBP0.52□□□□□ -2.33
SMARCAD1-202ENST00000359052 SPINK6Q6UWN8 80 aa0.52□□□□□ -2.33
SMARCAD1-202ENST00000359052 RHPN1-AS1Q9BWJ2 59 aa0.52□□□□□ -2.33
SMARCAD1-202ENST00000359052 S4R3F8 94 aa0.52□□□□□ -2.33
SMARCAD1-202ENST00000359052 MT1XP80297 61 aa0.52□□□□□ -2.33
SMARCAD1-202ENST00000359052 TLN2Q9Y4G6 2542 aa0.52□□□□□ -2.33
SMARCAD1-202ENST00000359052 CSPG4Q6UVK1 2322 aa0.51□□□□□ -2.33
SMARCAD1-202ENST00000359052 MT1EP04732 61 aa0.51□□□□□ -2.33
SMARCAD1-202ENST00000359052 K7ERS5 55 aa0.5□□□□□ -2.33
SMARCAD1-202ENST00000359052 MGPP08493 103 aa0.5□□□□□ -2.33
SMARCAD1-202ENST00000359052 SPINK13Q1W4C9 94 aa0.5□□□□□ -2.33
SMARCAD1-202ENST00000359052 ACYP2P14621 99 aa0.5□□□□□ -2.33
SMARCAD1-202ENST00000359052 SPAG11BQ08648 103 aa0.5□□□□□ -2.33
SMARCAD1-202ENST00000359052 KNL1Q8NG31 2342 aa0.49□□□□□ -2.33
SMARCAD1-202ENST00000359052 SPRR2DP22532 72 aa0.48□□□□□ -2.33
SMARCAD1-202ENST00000359052 WFDC13Q8IUB5 93 aa0.46□□□□□ -2.34
SMARCAD1-202ENST00000359052 HAMPP81172 84 aa0.46□□□□□ -2.34
SMARCAD1-202ENST00000359052 A0A096LNI7 61 aa0.45□□□□□ -2.34
SMARCAD1-202ENST00000359052 MUC19Q7Z5P9 8384 aa0.45□□□□□ -2.34
SMARCAD1-202ENST00000359052 SPRR2EP22531 72 aa0.45□□□□□ -2.34
SMARCAD1-202ENST00000359052 SPRR2BP35325 72 aa0.45□□□□□ -2.34
SMARCAD1-202ENST00000359052 SPRR2AP35326 72 aa0.45□□□□□ -2.34
SMARCAD1-202ENST00000359052 PRO0255Q9UI72 69 aa0.45□□□□□ -2.34
SMARCAD1-202ENST00000359052 A0A1B0GU69 56 aa0.44□□□□□ -2.34
SMARCAD1-202ENST00000359052 S100A4P26447 101 aaKnown RBP0.43□□□□□ -2.34
SMARCAD1-202ENST00000359052 APELAP0DMC3 54 aa0.43□□□□□ -2.34
SMARCAD1-202ENST00000359052 KRTAP19-3Q7Z4W3 81 aa0.43□□□□□ -2.34
SMARCAD1-202ENST00000359052 WFDC10BQ8IUB3 73 aa0.43□□□□□ -2.34
SMARCAD1-202ENST00000359052 DSTQ03001 7570 aaKnown RBP0.43□□□□□ -2.34
SMARCAD1-202ENST00000359052 M0QZ58 72 aa0.42□□□□□ -2.34
SMARCAD1-202ENST00000359052 KRTAP12-3P60328 96 aa0.42□□□□□ -2.34
SMARCAD1-202ENST00000359052 PRLHP81277 87 aa0.42□□□□□ -2.34
SMARCAD1-202ENST00000359052 SSBP3-AS1Q7Z2R9 100 aa0.42□□□□□ -2.34
SMARCAD1-202ENST00000359052 MT1LQ93083 61 aa0.41□□□□□ -2.34
SMARCAD1-202ENST00000359052 TIMM8BQ9Y5J9 83 aaPredicted RBP0.41□□□□□ -2.34
SMARCAD1-202ENST00000359052 SPTSSBQ8NFR3 76 aa0.41□□□□□ -2.34
SMARCAD1-202ENST00000359052 DEFB136Q30KP8 78 aa0.4□□□□□ -2.35
SMARCAD1-202ENST00000359052 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
SMARCAD1-202ENST00000359052 NOP10Q9NPE3 64 aaKnown RBP0.4□□□□□ -2.35
SMARCAD1-202ENST00000359052 MUC16Q8WXI7 14507 aa0.39□□□□□ -2.35
SMARCAD1-202ENST00000359052 KRTAP20-2Q3LI61 65 aa0.39□□□□□ -2.35
SMARCAD1-202ENST00000359052 CRIPTQ9P021 101 aa0.39□□□□□ -2.35
SMARCAD1-202ENST00000359052 KRTAP6-1Q3LI64 71 aa0.36□□□□□ -2.35
SMARCAD1-202ENST00000359052 MT1MQ8N339 61 aa0.36□□□□□ -2.35
SMARCAD1-202ENST00000359052 SPRR2FQ96RM1 72 aa0.36□□□□□ -2.35
SMARCAD1-202ENST00000359052 C9orf92A6NGG3 77 aa0.36□□□□□ -2.35
SMARCAD1-202ENST00000359052 A0A0D9SG42 100 aa0.34□□□□□ -2.35
SMARCAD1-202ENST00000359052 KRTAP6-2Q3LI66 62 aa0.33□□□□□ -2.36
SMARCAD1-202ENST00000359052 SPART-AS1P0CW21 52 aa0.32□□□□□ -2.36
SMARCAD1-202ENST00000359052 TOMM7Q9P0U1 55 aa0.3□□□□□ -2.36
SMARCAD1-202ENST00000359052 PRM1P04553 51 aa0.29□□□□□ -2.36
SMARCAD1-202ENST00000359052 DEFB135Q30KP9 77 aa0.29□□□□□ -2.36
SMARCAD1-202ENST00000359052 HTN1P15515 57 aa0.29□□□□□ -2.36
SMARCAD1-202ENST00000359052 MT1GP13640 62 aa0.28□□□□□ -2.36
SMARCAD1-202ENST00000359052 SYNE1Q8NF91 8797 aaKnown RBP0.27□□□□□ -2.37
SMARCAD1-202ENST00000359052 MT4P47944 62 aa0.27□□□□□ -2.37
SMARCAD1-202ENST00000359052 HTN3P15516 51 aa0.25□□□□□ -2.37
SMARCAD1-202ENST00000359052 DEFB105AQ8NG35 78 aa0.25□□□□□ -2.37
SMARCAD1-202ENST00000359052 DEFB4AO15263 64 aa0.22□□□□□ -2.37
SMARCAD1-202ENST00000359052 TNP1P09430 55 aa0.22□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 140.4 ms