RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
CSNK1D-202ENST00000314028 MT1EP04732 61 aa4.75□□□□□ -1.65
CSNK1D-202ENST00000314028 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
CSNK1D-202ENST00000314028 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
CSNK1D-202ENST00000314028 SPRR2FQ96RM1 72 aa4.7□□□□□ -1.66
CSNK1D-202ENST00000314028 LCE2AQ5TA79 106 aaPredicted RBP4.67□□□□□ -1.66
CSNK1D-202ENST00000314028 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
CSNK1D-202ENST00000314028 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
CSNK1D-202ENST00000314028 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
CSNK1D-202ENST00000314028 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
CSNK1D-202ENST00000314028 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
CSNK1D-202ENST00000314028 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
CSNK1D-202ENST00000314028 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
CSNK1D-202ENST00000314028 MT1MQ8N339 61 aa4.49□□□□□ -1.69
CSNK1D-202ENST00000314028 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
CSNK1D-202ENST00000314028 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.69
CSNK1D-202ENST00000314028 LCE2DQ5TA82 110 aaPredicted RBP4.37□□□□□ -1.71
CSNK1D-202ENST00000314028 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
CSNK1D-202ENST00000314028 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
CSNK1D-202ENST00000314028 MDN1Q9NU22 5596 aa4.28□□□□□ -1.72
CSNK1D-202ENST00000314028 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
CSNK1D-202ENST00000314028 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
CSNK1D-202ENST00000314028 PRM1P04553 51 aa4.19□□□□□ -1.74
CSNK1D-202ENST00000314028 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
CSNK1D-202ENST00000314028 SPRR2EP22531 72 aa4.17□□□□□ -1.74
CSNK1D-202ENST00000314028 SPRR2BP35325 72 aa4.17□□□□□ -1.74
CSNK1D-202ENST00000314028 SPRR2AP35326 72 aa4.17□□□□□ -1.74
CSNK1D-202ENST00000314028 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
CSNK1D-202ENST00000314028 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
CSNK1D-202ENST00000314028 MT1AP04731 61 aa4□□□□□ -1.77
CSNK1D-202ENST00000314028 SPRR2DP22532 72 aa3.95□□□□□ -1.78
CSNK1D-202ENST00000314028 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
CSNK1D-202ENST00000314028 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
CSNK1D-202ENST00000314028 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
CSNK1D-202ENST00000314028 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
CSNK1D-202ENST00000314028 MT3P25713 68 aa3.79□□□□□ -1.8
CSNK1D-202ENST00000314028 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
CSNK1D-202ENST00000314028 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
CSNK1D-202ENST00000314028 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
CSNK1D-202ENST00000314028 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.71□□□□□ -1.81
CSNK1D-202ENST00000314028 MT4P47944 62 aa3.71□□□□□ -1.81
CSNK1D-202ENST00000314028 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
CSNK1D-202ENST00000314028 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
CSNK1D-202ENST00000314028 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
CSNK1D-202ENST00000314028 NEBP20929 6669 aa3.5□□□□□ -1.85
CSNK1D-202ENST00000314028 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
CSNK1D-202ENST00000314028 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
CSNK1D-202ENST00000314028 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.87
CSNK1D-202ENST00000314028 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
CSNK1D-202ENST00000314028 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
CSNK1D-202ENST00000314028 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
CSNK1D-202ENST00000314028 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
CSNK1D-202ENST00000314028 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
CSNK1D-202ENST00000314028 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
CSNK1D-202ENST00000314028 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
CSNK1D-202ENST00000314028 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
CSNK1D-202ENST00000314028 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CSNK1D-202ENST00000314028 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
CSNK1D-202ENST00000314028 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.97
CSNK1D-202ENST00000314028 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
CSNK1D-202ENST00000314028 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
CSNK1D-202ENST00000314028 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
CSNK1D-202ENST00000314028 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
CSNK1D-202ENST00000314028 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
CSNK1D-202ENST00000314028 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
CSNK1D-202ENST00000314028 LCE1CQ5T751 118 aa2.53□□□□□ -2
CSNK1D-202ENST00000314028 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
CSNK1D-202ENST00000314028 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
CSNK1D-202ENST00000314028 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
CSNK1D-202ENST00000314028 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
CSNK1D-202ENST00000314028 KRTAP9-9Q9BYP9 154 aa2.34□□□□□ -2.04
CSNK1D-202ENST00000314028 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
CSNK1D-202ENST00000314028 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
CSNK1D-202ENST00000314028 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
CSNK1D-202ENST00000314028 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
CSNK1D-202ENST00000314028 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
CSNK1D-202ENST00000314028 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 117.5 ms