RNA–Protein interactions for RNA: ENST00000310653.10

RAB6A-201, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene RAB6A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-201ENST00000310653 MDN1Q9NU22 5596 aa4.66□□□□□ -1.66
RAB6A-201ENST00000310653 CRCT1Q9UGL9 99 aa4.65□□□□□ -1.66
RAB6A-201ENST00000310653 INE1O15225 51 aa4.63□□□□□ -1.67
RAB6A-201ENST00000310653 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.67
RAB6A-201ENST00000310653 MT1EP04732 61 aa4.55□□□□□ -1.68
RAB6A-201ENST00000310653 MT1LQ93083 61 aa4.53□□□□□ -1.68
RAB6A-201ENST00000310653 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
RAB6A-201ENST00000310653 KRTAP19-6Q3LI70 58 aa4.5□□□□□ -1.69
RAB6A-201ENST00000310653 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
RAB6A-201ENST00000310653 MT1GP13640 62 aa4.46□□□□□ -1.7
RAB6A-201ENST00000310653 SPRR2FQ96RM1 72 aa4.44□□□□□ -1.7
RAB6A-201ENST00000310653 MT1MQ8N339 61 aa4.28□□□□□ -1.72
RAB6A-201ENST00000310653 KRTAP19-3Q7Z4W3 81 aa4.27□□□□□ -1.73
RAB6A-201ENST00000310653 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
RAB6A-201ENST00000310653 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
RAB6A-201ENST00000310653 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
RAB6A-201ENST00000310653 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.74
RAB6A-201ENST00000310653 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
RAB6A-201ENST00000310653 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
RAB6A-201ENST00000310653 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
RAB6A-201ENST00000310653 SPRR2EP22531 72 aa4.02□□□□□ -1.77
RAB6A-201ENST00000310653 SPRR2BP35325 72 aa4.02□□□□□ -1.77
RAB6A-201ENST00000310653 SPRR2AP35326 72 aa4.02□□□□□ -1.77
RAB6A-201ENST00000310653 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
RAB6A-201ENST00000310653 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
RAB6A-201ENST00000310653 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
RAB6A-201ENST00000310653 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
RAB6A-201ENST00000310653 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
RAB6A-201ENST00000310653 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
RAB6A-201ENST00000310653 SPRR2DP22532 72 aa3.81□□□□□ -1.8
RAB6A-201ENST00000310653 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
RAB6A-201ENST00000310653 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
RAB6A-201ENST00000310653 MT1AP04731 61 aa3.7□□□□□ -1.82
RAB6A-201ENST00000310653 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.82
RAB6A-201ENST00000310653 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
RAB6A-201ENST00000310653 NEBP20929 6669 aa3.64□□□□□ -1.83
RAB6A-201ENST00000310653 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
RAB6A-201ENST00000310653 MT4P47944 62 aa3.59□□□□□ -1.83
RAB6A-201ENST00000310653 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
RAB6A-201ENST00000310653 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
RAB6A-201ENST00000310653 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
RAB6A-201ENST00000310653 PRM1P04553 51 aa3.49□□□□□ -1.85
RAB6A-201ENST00000310653 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
RAB6A-201ENST00000310653 MT3P25713 68 aa3.36□□□□□ -1.87
RAB6A-201ENST00000310653 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.87
RAB6A-201ENST00000310653 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.89
RAB6A-201ENST00000310653 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
RAB6A-201ENST00000310653 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.89
RAB6A-201ENST00000310653 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
RAB6A-201ENST00000310653 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
RAB6A-201ENST00000310653 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
RAB6A-201ENST00000310653 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
RAB6A-201ENST00000310653 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
RAB6A-201ENST00000310653 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
RAB6A-201ENST00000310653 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
RAB6A-201ENST00000310653 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
RAB6A-201ENST00000310653 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
RAB6A-201ENST00000310653 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
RAB6A-201ENST00000310653 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
RAB6A-201ENST00000310653 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
RAB6A-201ENST00000310653 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
RAB6A-201ENST00000310653 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
RAB6A-201ENST00000310653 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
RAB6A-201ENST00000310653 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
RAB6A-201ENST00000310653 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
RAB6A-201ENST00000310653 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
RAB6A-201ENST00000310653 KRTAP5-8O75690 187 aa2.55□□□□□ -2
RAB6A-201ENST00000310653 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
RAB6A-201ENST00000310653 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
RAB6A-201ENST00000310653 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
RAB6A-201ENST00000310653 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
RAB6A-201ENST00000310653 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
RAB6A-201ENST00000310653 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
RAB6A-201ENST00000310653 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
RAB6A-201ENST00000310653 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
RAB6A-201ENST00000310653 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
RAB6A-201ENST00000310653 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 88 ms