RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
PTPN7-201ENST00000309017 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
PTPN7-201ENST00000309017 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
PTPN7-201ENST00000309017 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
PTPN7-201ENST00000309017 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
PTPN7-201ENST00000309017 MT1LQ93083 61 aa3.76□□□□□ -1.81
PTPN7-201ENST00000309017 MT1EP04732 61 aa3.73□□□□□ -1.81
PTPN7-201ENST00000309017 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.82
PTPN7-201ENST00000309017 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
PTPN7-201ENST00000309017 SPRR2FQ96RM1 72 aa3.68□□□□□ -1.82
PTPN7-201ENST00000309017 LOC100996750A0A140TA64 210 aa3.66□□□□□ -1.82
PTPN7-201ENST00000309017 MT1GP13640 62 aa3.64□□□□□ -1.83
PTPN7-201ENST00000309017 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
PTPN7-201ENST00000309017 LCE2DQ5TA82 110 aaPredicted RBP3.62□□□□□ -1.83
PTPN7-201ENST00000309017 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
PTPN7-201ENST00000309017 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
PTPN7-201ENST00000309017 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
PTPN7-201ENST00000309017 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
PTPN7-201ENST00000309017 MT1MQ8N339 61 aa3.49□□□□□ -1.85
PTPN7-201ENST00000309017 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
PTPN7-201ENST00000309017 LCE3BQ5TA77 95 aa3.47□□□□□ -1.85
PTPN7-201ENST00000309017 SPRR2EP22531 72 aa3.43□□□□□ -1.86
PTPN7-201ENST00000309017 SPRR2BP35325 72 aa3.43□□□□□ -1.86
PTPN7-201ENST00000309017 SPRR2AP35326 72 aa3.43□□□□□ -1.86
PTPN7-201ENST00000309017 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
PTPN7-201ENST00000309017 KRTAP4-9Q9BYQ8 210 aa3.39□□□□□ -1.87
PTPN7-201ENST00000309017 SPRR2DP22532 72 aa3.28□□□□□ -1.88
PTPN7-201ENST00000309017 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
PTPN7-201ENST00000309017 LCE5AQ5TCM9 118 aa3.26□□□□□ -1.89
PTPN7-201ENST00000309017 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
PTPN7-201ENST00000309017 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
PTPN7-201ENST00000309017 PRM1P04553 51 aa3.2□□□□□ -1.9
PTPN7-201ENST00000309017 MT1AP04731 61 aa3.19□□□□□ -1.9
PTPN7-201ENST00000309017 NEBP20929 6669 aa3.19□□□□□ -1.9
PTPN7-201ENST00000309017 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
PTPN7-201ENST00000309017 MT4P47944 62 aa3.16□□□□□ -1.9
PTPN7-201ENST00000309017 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.91
PTPN7-201ENST00000309017 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
PTPN7-201ENST00000309017 LCE1AQ5T7P2 110 aa3.06□□□□□ -1.92
PTPN7-201ENST00000309017 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
PTPN7-201ENST00000309017 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
PTPN7-201ENST00000309017 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
PTPN7-201ENST00000309017 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
PTPN7-201ENST00000309017 MT3P25713 68 aa2.87□□□□□ -1.95
PTPN7-201ENST00000309017 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
PTPN7-201ENST00000309017 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
PTPN7-201ENST00000309017 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
PTPN7-201ENST00000309017 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
PTPN7-201ENST00000309017 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
PTPN7-201ENST00000309017 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
PTPN7-201ENST00000309017 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
PTPN7-201ENST00000309017 LCE4AQ5TA78 99 aa2.52□□□□□ -2.01
PTPN7-201ENST00000309017 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
PTPN7-201ENST00000309017 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
PTPN7-201ENST00000309017 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
PTPN7-201ENST00000309017 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
PTPN7-201ENST00000309017 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
PTPN7-201ENST00000309017 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
PTPN7-201ENST00000309017 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
PTPN7-201ENST00000309017 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
PTPN7-201ENST00000309017 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
PTPN7-201ENST00000309017 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
PTPN7-201ENST00000309017 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
PTPN7-201ENST00000309017 KRTAP5-8O75690 187 aa2.15□□□□□ -2.06
PTPN7-201ENST00000309017 KRTAP9-9Q9BYP9 154 aa2.15□□□□□ -2.07
PTPN7-201ENST00000309017 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
PTPN7-201ENST00000309017 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
PTPN7-201ENST00000309017 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
PTPN7-201ENST00000309017 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
PTPN7-201ENST00000309017 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
PTPN7-201ENST00000309017 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
PTPN7-201ENST00000309017 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
PTPN7-201ENST00000309017 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
PTPN7-201ENST00000309017 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
PTPN7-201ENST00000309017 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
PTPN7-201ENST00000309017 PHGR1C9JFL3 82 aa1.59□□□□□ -2.15
PTPN7-201ENST00000309017 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 188.4 ms