RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
RETREG1-201ENST00000306320 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
RETREG1-201ENST00000306320 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
RETREG1-201ENST00000306320 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
RETREG1-201ENST00000306320 MT1EP04732 61 aa6.02□□□□□ -1.45
RETREG1-201ENST00000306320 MT1LQ93083 61 aa6.01□□□□□ -1.45
RETREG1-201ENST00000306320 MACF1Q9UPN3 7388 aaKnown RBP5.95□□□□□ -1.46
RETREG1-201ENST00000306320 SYNE2Q8WXH0 6885 aaKnown RBP5.94□□□□□ -1.46
RETREG1-201ENST00000306320 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
RETREG1-201ENST00000306320 MT1GP13640 62 aa5.9□□□□□ -1.46
RETREG1-201ENST00000306320 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
RETREG1-201ENST00000306320 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
RETREG1-201ENST00000306320 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
RETREG1-201ENST00000306320 MDN1Q9NU22 5596 aa5.77□□□□□ -1.49
RETREG1-201ENST00000306320 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
RETREG1-201ENST00000306320 LCE3BQ5TA77 95 aa5.7□□□□□ -1.5
RETREG1-201ENST00000306320 MT1MQ8N339 61 aa5.66□□□□□ -1.5
RETREG1-201ENST00000306320 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
RETREG1-201ENST00000306320 KRTAP9-2Q9BYQ4 174 aa5.42□□□□□ -1.54
RETREG1-201ENST00000306320 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.55
RETREG1-201ENST00000306320 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
RETREG1-201ENST00000306320 PRM1P04553 51 aa5.34□□□□□ -1.55
RETREG1-201ENST00000306320 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
RETREG1-201ENST00000306320 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
RETREG1-201ENST00000306320 SPRR2EP22531 72 aa5.23□□□□□ -1.57
RETREG1-201ENST00000306320 SPRR2BP35325 72 aa5.23□□□□□ -1.57
RETREG1-201ENST00000306320 SPRR2AP35326 72 aa5.23□□□□□ -1.57
RETREG1-201ENST00000306320 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
RETREG1-201ENST00000306320 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
RETREG1-201ENST00000306320 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
RETREG1-201ENST00000306320 KRTAP5-5Q701N2 237 aaPredicted RBP5.01□□□□□ -1.61
RETREG1-201ENST00000306320 SPRR2DP22532 72 aa4.97□□□□□ -1.61
RETREG1-201ENST00000306320 MT1AP04731 61 aa4.94□□□□□ -1.62
RETREG1-201ENST00000306320 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
RETREG1-201ENST00000306320 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
RETREG1-201ENST00000306320 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.82□□□□□ -1.64
RETREG1-201ENST00000306320 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
RETREG1-201ENST00000306320 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
RETREG1-201ENST00000306320 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
RETREG1-201ENST00000306320 MT4P47944 62 aa4.63□□□□□ -1.67
RETREG1-201ENST00000306320 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
RETREG1-201ENST00000306320 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
RETREG1-201ENST00000306320 NEBP20929 6669 aa4.53□□□□□ -1.68
RETREG1-201ENST00000306320 MT3P25713 68 aa4.5□□□□□ -1.69
RETREG1-201ENST00000306320 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
RETREG1-201ENST00000306320 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.71
RETREG1-201ENST00000306320 MUC19Q7Z5P9 8384 aa4.26□□□□□ -1.73
RETREG1-201ENST00000306320 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
RETREG1-201ENST00000306320 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
RETREG1-201ENST00000306320 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
RETREG1-201ENST00000306320 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
RETREG1-201ENST00000306320 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
RETREG1-201ENST00000306320 MUC5ACP98088 5654 aa4□□□□□ -1.77
RETREG1-201ENST00000306320 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
RETREG1-201ENST00000306320 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
RETREG1-201ENST00000306320 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
RETREG1-201ENST00000306320 KRTAP20-1Q3LI63 56 aa3.85□□□□□ -1.79
RETREG1-201ENST00000306320 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
RETREG1-201ENST00000306320 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
RETREG1-201ENST00000306320 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
RETREG1-201ENST00000306320 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
RETREG1-201ENST00000306320 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
RETREG1-201ENST00000306320 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
RETREG1-201ENST00000306320 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
RETREG1-201ENST00000306320 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
RETREG1-201ENST00000306320 LCE1CQ5T751 118 aa3.34□□□□□ -1.88
RETREG1-201ENST00000306320 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
RETREG1-201ENST00000306320 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
RETREG1-201ENST00000306320 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
RETREG1-201ENST00000306320 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.92
RETREG1-201ENST00000306320 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
RETREG1-201ENST00000306320 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
RETREG1-201ENST00000306320 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
RETREG1-201ENST00000306320 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
RETREG1-201ENST00000306320 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
RETREG1-201ENST00000306320 PHGR1C9JFL3 82 aa2.53□□□□□ -2
RETREG1-201ENST00000306320 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 116.6 ms