RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
TNFRSF11A-201ENST00000269485 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
TNFRSF11A-201ENST00000269485 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
TNFRSF11A-201ENST00000269485 MT1GP13640 62 aa4.95□□□□□ -1.62
TNFRSF11A-201ENST00000269485 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
TNFRSF11A-201ENST00000269485 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
TNFRSF11A-201ENST00000269485 KRTAP19-6Q3LI70 58 aa4.88□□□□□ -1.63
TNFRSF11A-201ENST00000269485 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
TNFRSF11A-201ENST00000269485 MT1EP04732 61 aa4.84□□□□□ -1.64
TNFRSF11A-201ENST00000269485 MT1LQ93083 61 aa4.8□□□□□ -1.64
TNFRSF11A-201ENST00000269485 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
TNFRSF11A-201ENST00000269485 LCE2DQ5TA82 110 aaPredicted RBP4.71□□□□□ -1.65
TNFRSF11A-201ENST00000269485 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
TNFRSF11A-201ENST00000269485 SPRR2EP22531 72 aa4.64□□□□□ -1.67
TNFRSF11A-201ENST00000269485 SPRR2BP35325 72 aa4.64□□□□□ -1.67
TNFRSF11A-201ENST00000269485 SPRR2AP35326 72 aa4.64□□□□□ -1.67
TNFRSF11A-201ENST00000269485 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
TNFRSF11A-201ENST00000269485 MT1MQ8N339 61 aa4.58□□□□□ -1.68
TNFRSF11A-201ENST00000269485 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
TNFRSF11A-201ENST00000269485 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
TNFRSF11A-201ENST00000269485 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
TNFRSF11A-201ENST00000269485 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
TNFRSF11A-201ENST00000269485 SPRR2DP22532 72 aa4.4□□□□□ -1.71
TNFRSF11A-201ENST00000269485 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
TNFRSF11A-201ENST00000269485 LCE1AQ5T7P2 110 aa4.34□□□□□ -1.71
TNFRSF11A-201ENST00000269485 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
TNFRSF11A-201ENST00000269485 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.29□□□□□ -1.72
TNFRSF11A-201ENST00000269485 PRM1P04553 51 aa4.25□□□□□ -1.73
TNFRSF11A-201ENST00000269485 MT4P47944 62 aa4.25□□□□□ -1.73
TNFRSF11A-201ENST00000269485 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
TNFRSF11A-201ENST00000269485 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
TNFRSF11A-201ENST00000269485 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
TNFRSF11A-201ENST00000269485 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
TNFRSF11A-201ENST00000269485 KRTAP5-9P26371 169 aa4.09□□□□□ -1.76
TNFRSF11A-201ENST00000269485 NEBP20929 6669 aa4.07□□□□□ -1.76
TNFRSF11A-201ENST00000269485 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
TNFRSF11A-201ENST00000269485 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
TNFRSF11A-201ENST00000269485 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
TNFRSF11A-201ENST00000269485 MT1AP04731 61 aa3.97□□□□□ -1.77
TNFRSF11A-201ENST00000269485 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
TNFRSF11A-201ENST00000269485 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
TNFRSF11A-201ENST00000269485 KRTAP4-6Q9BYQ5 205 aa3.88□□□□□ -1.79
TNFRSF11A-201ENST00000269485 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
TNFRSF11A-201ENST00000269485 LCE1DQ5T752 114 aa3.76□□□□□ -1.81
TNFRSF11A-201ENST00000269485 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
TNFRSF11A-201ENST00000269485 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
TNFRSF11A-201ENST00000269485 MT3P25713 68 aa3.72□□□□□ -1.81
TNFRSF11A-201ENST00000269485 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
TNFRSF11A-201ENST00000269485 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
TNFRSF11A-201ENST00000269485 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
TNFRSF11A-201ENST00000269485 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
TNFRSF11A-201ENST00000269485 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
TNFRSF11A-201ENST00000269485 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
TNFRSF11A-201ENST00000269485 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
TNFRSF11A-201ENST00000269485 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
TNFRSF11A-201ENST00000269485 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
TNFRSF11A-201ENST00000269485 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
TNFRSF11A-201ENST00000269485 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
TNFRSF11A-201ENST00000269485 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
TNFRSF11A-201ENST00000269485 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
TNFRSF11A-201ENST00000269485 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
TNFRSF11A-201ENST00000269485 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
TNFRSF11A-201ENST00000269485 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
TNFRSF11A-201ENST00000269485 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
TNFRSF11A-201ENST00000269485 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
TNFRSF11A-201ENST00000269485 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
TNFRSF11A-201ENST00000269485 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
TNFRSF11A-201ENST00000269485 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
TNFRSF11A-201ENST00000269485 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
TNFRSF11A-201ENST00000269485 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
TNFRSF11A-201ENST00000269485 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
TNFRSF11A-201ENST00000269485 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
TNFRSF11A-201ENST00000269485 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
TNFRSF11A-201ENST00000269485 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
TNFRSF11A-201ENST00000269485 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.05
TNFRSF11A-201ENST00000269485 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
TNFRSF11A-201ENST00000269485 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 144.3 ms