RNA–Protein interactions for RNA: ENST00000262134.9

LPCAT2-201, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT2, Length 5,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-201ENST00000262134 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
LPCAT2-201ENST00000262134 HMCN2Q8NDA2 5059 aa4.03□□□□□ -1.76
LPCAT2-201ENST00000262134 LCE2DQ5TA82 110 aaPredicted RBP4.03□□□□□ -1.76
LPCAT2-201ENST00000262134 KRTAP9-2Q9BYQ4 174 aa4.01□□□□□ -1.77
LPCAT2-201ENST00000262134 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
LPCAT2-201ENST00000262134 MT1MQ8N339 61 aa3.97□□□□□ -1.77
LPCAT2-201ENST00000262134 FAT4Q6V0I7 4981 aa3.95□□□□□ -1.78
LPCAT2-201ENST00000262134 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
LPCAT2-201ENST00000262134 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
LPCAT2-201ENST00000262134 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
LPCAT2-201ENST00000262134 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
LPCAT2-201ENST00000262134 FSIP2Q5CZC0 6907 aa3.92□□□□□ -1.78
LPCAT2-201ENST00000262134 RNF213Q63HN8 5207 aa3.89□□□□□ -1.79
LPCAT2-201ENST00000262134 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
LPCAT2-201ENST00000262134 LCE2AQ5TA79 106 aaPredicted RBP3.87□□□□□ -1.79
LPCAT2-201ENST00000262134 MUC2Q02817 5179 aa3.86□□□□□ -1.79
LPCAT2-201ENST00000262134 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
LPCAT2-201ENST00000262134 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
LPCAT2-201ENST00000262134 MT4P47944 62 aa3.83□□□□□ -1.8
LPCAT2-201ENST00000262134 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
LPCAT2-201ENST00000262134 LCE1DQ5T752 114 aa3.82□□□□□ -1.8
LPCAT2-201ENST00000262134 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
LPCAT2-201ENST00000262134 MT1AP04731 61 aa3.75□□□□□ -1.81
LPCAT2-201ENST00000262134 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
LPCAT2-201ENST00000262134 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.82
LPCAT2-201ENST00000262134 FCGBPQ9Y6R7 5405 aaPredicted RBP3.61□□□□□ -1.83
LPCAT2-201ENST00000262134 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
LPCAT2-201ENST00000262134 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
LPCAT2-201ENST00000262134 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
LPCAT2-201ENST00000262134 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
LPCAT2-201ENST00000262134 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
LPCAT2-201ENST00000262134 KMT2DO14686 5537 aa3.5□□□□□ -1.85
LPCAT2-201ENST00000262134 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
LPCAT2-201ENST00000262134 USH2AO75445 5202 aa3.48□□□□□ -1.85
LPCAT2-201ENST00000262134 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
LPCAT2-201ENST00000262134 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
LPCAT2-201ENST00000262134 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
LPCAT2-201ENST00000262134 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
LPCAT2-201ENST00000262134 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
LPCAT2-201ENST00000262134 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
LPCAT2-201ENST00000262134 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
LPCAT2-201ENST00000262134 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
LPCAT2-201ENST00000262134 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
LPCAT2-201ENST00000262134 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
LPCAT2-201ENST00000262134 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
LPCAT2-201ENST00000262134 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.91
LPCAT2-201ENST00000262134 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
LPCAT2-201ENST00000262134 NEBP20929 6669 aa3□□□□□ -1.93
LPCAT2-201ENST00000262134 KRTAP5-9P26371 169 aa2.98□□□□□ -1.93
LPCAT2-201ENST00000262134 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
LPCAT2-201ENST00000262134 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
LPCAT2-201ENST00000262134 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
LPCAT2-201ENST00000262134 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
LPCAT2-201ENST00000262134 MDN1Q9NU22 5596 aa2.78□□□□□ -1.96
LPCAT2-201ENST00000262134 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
LPCAT2-201ENST00000262134 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
LPCAT2-201ENST00000262134 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
LPCAT2-201ENST00000262134 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
LPCAT2-201ENST00000262134 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
LPCAT2-201ENST00000262134 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
LPCAT2-201ENST00000262134 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
LPCAT2-201ENST00000262134 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
LPCAT2-201ENST00000262134 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
LPCAT2-201ENST00000262134 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
LPCAT2-201ENST00000262134 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
LPCAT2-201ENST00000262134 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
LPCAT2-201ENST00000262134 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
LPCAT2-201ENST00000262134 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
LPCAT2-201ENST00000262134 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
LPCAT2-201ENST00000262134 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
LPCAT2-201ENST00000262134 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
LPCAT2-201ENST00000262134 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
LPCAT2-201ENST00000262134 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
LPCAT2-201ENST00000262134 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
LPCAT2-201ENST00000262134 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
LPCAT2-201ENST00000262134 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
LPCAT2-201ENST00000262134 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 10.4 ms