RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
TARDBP-201ENST00000240185 FAT4Q6V0I7 4981 aa4.24□□□□□ -1.73
TARDBP-201ENST00000240185 LCE2DQ5TA82 110 aaPredicted RBP4.21□□□□□ -1.74
TARDBP-201ENST00000240185 RNF213Q63HN8 5207 aa4.2□□□□□ -1.74
TARDBP-201ENST00000240185 UBR4Q5T4S7 5183 aa4.19□□□□□ -1.74
TARDBP-201ENST00000240185 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
TARDBP-201ENST00000240185 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.74
TARDBP-201ENST00000240185 MT1MQ8N339 61 aa4.15□□□□□ -1.75
TARDBP-201ENST00000240185 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
TARDBP-201ENST00000240185 MT4P47944 62 aa4.07□□□□□ -1.76
TARDBP-201ENST00000240185 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
TARDBP-201ENST00000240185 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
TARDBP-201ENST00000240185 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
TARDBP-201ENST00000240185 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
TARDBP-201ENST00000240185 KRTAP2-1Q9BYU5 128 aa3.96□□□□□ -1.78
TARDBP-201ENST00000240185 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
TARDBP-201ENST00000240185 MT1AP04731 61 aa3.93□□□□□ -1.78
TARDBP-201ENST00000240185 LCE2AQ5TA79 106 aaPredicted RBP3.9□□□□□ -1.78
TARDBP-201ENST00000240185 KRTAP19-7Q3SYF9 63 aa3.85□□□□□ -1.79
TARDBP-201ENST00000240185 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
TARDBP-201ENST00000240185 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
TARDBP-201ENST00000240185 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
TARDBP-201ENST00000240185 FSIP2Q5CZC0 6907 aa3.8□□□□□ -1.8
TARDBP-201ENST00000240185 USH2AO75445 5202 aa3.73□□□□□ -1.81
TARDBP-201ENST00000240185 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
TARDBP-201ENST00000240185 KRTAP9-7A8MTY7 169 aa3.67□□□□□ -1.82
TARDBP-201ENST00000240185 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
TARDBP-201ENST00000240185 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
TARDBP-201ENST00000240185 KMT2DO14686 5537 aa3.63□□□□□ -1.83
TARDBP-201ENST00000240185 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
TARDBP-201ENST00000240185 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
TARDBP-201ENST00000240185 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
TARDBP-201ENST00000240185 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
TARDBP-201ENST00000240185 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
TARDBP-201ENST00000240185 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
TARDBP-201ENST00000240185 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.84
TARDBP-201ENST00000240185 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
TARDBP-201ENST00000240185 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
TARDBP-201ENST00000240185 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
TARDBP-201ENST00000240185 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
TARDBP-201ENST00000240185 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
TARDBP-201ENST00000240185 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.87
TARDBP-201ENST00000240185 MACF1Q9UPN3 7388 aaKnown RBP3.33□□□□□ -1.88
TARDBP-201ENST00000240185 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
TARDBP-201ENST00000240185 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
TARDBP-201ENST00000240185 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
TARDBP-201ENST00000240185 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
TARDBP-201ENST00000240185 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.05□□□□□ -1.92
TARDBP-201ENST00000240185 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
TARDBP-201ENST00000240185 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
TARDBP-201ENST00000240185 MDN1Q9NU22 5596 aa2.93□□□□□ -1.94
TARDBP-201ENST00000240185 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.94
TARDBP-201ENST00000240185 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
TARDBP-201ENST00000240185 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
TARDBP-201ENST00000240185 KRTAP4-6Q9BYQ5 205 aa2.8□□□□□ -1.96
TARDBP-201ENST00000240185 NEBP20929 6669 aa2.78□□□□□ -1.96
TARDBP-201ENST00000240185 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
TARDBP-201ENST00000240185 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
TARDBP-201ENST00000240185 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
TARDBP-201ENST00000240185 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
TARDBP-201ENST00000240185 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
TARDBP-201ENST00000240185 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
TARDBP-201ENST00000240185 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
TARDBP-201ENST00000240185 KRTAP5-3Q6L8H2 238 aa2.26□□□□□ -2.05
TARDBP-201ENST00000240185 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
TARDBP-201ENST00000240185 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
TARDBP-201ENST00000240185 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
TARDBP-201ENST00000240185 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
TARDBP-201ENST00000240185 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
TARDBP-201ENST00000240185 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
TARDBP-201ENST00000240185 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
TARDBP-201ENST00000240185 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
TARDBP-201ENST00000240185 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
TARDBP-201ENST00000240185 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
TARDBP-201ENST00000240185 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
TARDBP-201ENST00000240185 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
TARDBP-201ENST00000240185 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms