RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 FAM236AA0A1B0GUQ0 79 aa3.59□□□□□ -1.83
PTCHD3P1-201ENST00000612350 FAM236BA0A1B0GV22 79 aa3.59□□□□□ -1.83
PTCHD3P1-201ENST00000612350 K7EQZ3 153 aa3.59□□□□□ -1.83
PTCHD3P1-201ENST00000612350 ATOX1O00244 68 aa3.59□□□□□ -1.83
PTCHD3P1-201ENST00000612350 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
PTCHD3P1-201ENST00000612350 V9GYY9 64 aa3.59□□□□□ -1.83
PTCHD3P1-201ENST00000612350 hDV103S1A0JD37 113 aa3.58□□□□□ -1.84
PTCHD3P1-201ENST00000612350 TMEM254Q8TBM7 123 aa3.58□□□□□ -1.84
PTCHD3P1-201ENST00000612350 MMP24-AS1A0A0U1RRL7 71 aa3.57□□□□□ -1.84
PTCHD3P1-201ENST00000612350 SMIM20Q8N5G0 67 aa3.57□□□□□ -1.84
PTCHD3P1-201ENST00000612350 MRPL34Q9BQ48 92 aaKnown RBP3.57□□□□□ -1.84
PTCHD3P1-201ENST00000612350 ZCCHC13Q8WW36 166 aaKnown RBP3.55□□□□□ -1.84
PTCHD3P1-201ENST00000612350 HCG22E2RYF7 251 aa3.54□□□□□ -1.84
PTCHD3P1-201ENST00000612350 CASC2Q6XLA1 102 aa3.54□□□□□ -1.84
PTCHD3P1-201ENST00000612350 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
PTCHD3P1-201ENST00000612350 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
PTCHD3P1-201ENST00000612350 A0A087WVE0 104 aa3.53□□□□□ -1.84
PTCHD3P1-201ENST00000612350 Q8N9L7 120 aa3.53□□□□□ -1.84
PTCHD3P1-201ENST00000612350 NDUFS5O43920 106 aa3.52□□□□□ -1.85
PTCHD3P1-201ENST00000612350 UQCRQO14949 82 aa3.51□□□□□ -1.85
PTCHD3P1-201ENST00000612350 IGKV2-30P06310 120 aa3.51□□□□□ -1.85
PTCHD3P1-201ENST00000612350 WFDC13Q8IUB5 93 aa3.51□□□□□ -1.85
PTCHD3P1-201ENST00000612350 SERP2Q8N6R1 65 aa3.51□□□□□ -1.85
PTCHD3P1-201ENST00000612350 COX7CP15954 63 aa3.5□□□□□ -1.85
PTCHD3P1-201ENST00000612350 TP53AIP1Q9HCN2 124 aa3.5□□□□□ -1.85
PTCHD3P1-201ENST00000612350 TRAV7A0A075B6U4 112 aa3.49□□□□□ -1.85
PTCHD3P1-201ENST00000612350 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
PTCHD3P1-201ENST00000612350 SPINK7P58062 85 aa3.48□□□□□ -1.85
PTCHD3P1-201ENST00000612350 KRTAP10-7P60409 375 aaPredicted RBP3.48□□□□□ -1.85
PTCHD3P1-201ENST00000612350 RBM12B-AS1Q9P1G2 102 aa3.48□□□□□ -1.85
PTCHD3P1-201ENST00000612350 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
PTCHD3P1-201ENST00000612350 CCDC179H3BU77 68 aa3.46□□□□□ -1.86
PTCHD3P1-201ENST00000612350 HRES1P13985 223 aa3.46□□□□□ -1.86
PTCHD3P1-201ENST00000612350 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
PTCHD3P1-201ENST00000612350 MPLKIPQ8TAP9 179 aa3.46□□□□□ -1.86
PTCHD3P1-201ENST00000612350 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
PTCHD3P1-201ENST00000612350 Q5W150 140 aa3.45□□□□□ -1.86
PTCHD3P1-201ENST00000612350 C7orf65Q6ZTY9 151 aa3.45□□□□□ -1.86
PTCHD3P1-201ENST00000612350 NDUFC1O43677 76 aa3.44□□□□□ -1.86
PTCHD3P1-201ENST00000612350 MP68P56378 58 aa3.44□□□□□ -1.86
PTCHD3P1-201ENST00000612350 FAM236DA0A1B0GTK5 79 aa3.43□□□□□ -1.86
PTCHD3P1-201ENST00000612350 A6NN06 94 aa3.43□□□□□ -1.86
PTCHD3P1-201ENST00000612350 FAM236CP0DP71 79 aa3.43□□□□□ -1.86
PTCHD3P1-201ENST00000612350 C20orf197Q8N268 126 aa3.43□□□□□ -1.86
PTCHD3P1-201ENST00000612350 PRO0628Q9UI54 55 aa3.42□□□□□ -1.86
PTCHD3P1-201ENST00000612350 IGKV2D-30A0A075B6S6 120 aa3.41□□□□□ -1.86
PTCHD3P1-201ENST00000612350 TRAV22A0A0B4J277 110 aa3.41□□□□□ -1.86
PTCHD3P1-201ENST00000612350 TMEM258P61165 79 aa3.41□□□□□ -1.86
PTCHD3P1-201ENST00000612350 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
PTCHD3P1-201ENST00000612350 OCR1Q9BZK8 76 aa3.41□□□□□ -1.86
PTCHD3P1-201ENST00000612350 H3BPC8 53 aa3.4□□□□□ -1.87
PTCHD3P1-201ENST00000612350 SPRR2EP22531 72 aa3.4□□□□□ -1.87
PTCHD3P1-201ENST00000612350 SPRR2BP35325 72 aa3.4□□□□□ -1.87
PTCHD3P1-201ENST00000612350 SPRR2AP35326 72 aa3.4□□□□□ -1.87
PTCHD3P1-201ENST00000612350 LOC101927531A0A1B0GV80 90 aa3.39□□□□□ -1.87
PTCHD3P1-201ENST00000612350 ATP5EP56381 51 aaPredicted RBP3.39□□□□□ -1.87
PTCHD3P1-201ENST00000612350 KLKP1Q107X0 134 aa3.39□□□□□ -1.87
PTCHD3P1-201ENST00000612350 H0Y9P7 68 aa3.37□□□□□ -1.87
PTCHD3P1-201ENST00000612350 C4orf26Q17RF5 130 aa3.37□□□□□ -1.87
PTCHD3P1-201ENST00000612350 SNURFQ9Y675 71 aa3.37□□□□□ -1.87
PTCHD3P1-201ENST00000612350 CYP4F30PQ9H0H9 118 aa3.36□□□□□ -1.87
PTCHD3P1-201ENST00000612350 H1FX-AS1Q4G0G2 97 aa3.35□□□□□ -1.87
PTCHD3P1-201ENST00000612350 RPS28P62857 69 aaKnown RBP3.34□□□□□ -1.87
PTCHD3P1-201ENST00000612350 C1orf64Q8NEQ6 169 aa3.34□□□□□ -1.87
PTCHD3P1-201ENST00000612350 H7BZZ5 65 aa3.33□□□□□ -1.88
PTCHD3P1-201ENST00000612350 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
PTCHD3P1-201ENST00000612350 LINC00208Q96KT6 92 aa3.33□□□□□ -1.88
PTCHD3P1-201ENST00000612350 SPRR2FQ96RM1 72 aa3.33□□□□□ -1.88
PTCHD3P1-201ENST00000612350 MT1BP07438 61 aa3.32□□□□□ -1.88
PTCHD3P1-201ENST00000612350 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
PTCHD3P1-201ENST00000612350 CYSTM1Q9H1C7 97 aa3.3□□□□□ -1.88
PTCHD3P1-201ENST00000612350 SERP1Q9Y6X1 66 aa3.3□□□□□ -1.88
PTCHD3P1-201ENST00000612350 A8MUN3 132 aa3.29□□□□□ -1.88
PTCHD3P1-201ENST00000612350 SPRR2DP22532 72 aa3.29□□□□□ -1.88
PTCHD3P1-201ENST00000612350 SPANXA2-OT1Q8N9U9 137 aa3.29□□□□□ -1.88
PTCHD3P1-201ENST00000612350 PMAIP1Q13794 54 aa3.26□□□□□ -1.89
PTCHD3P1-201ENST00000612350 S4R3F8 94 aa3.26□□□□□ -1.89
PTCHD3P1-201ENST00000612350 CSAG1Q6PB30 78 aa3.24□□□□□ -1.89
PTCHD3P1-201ENST00000612350 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
PTCHD3P1-201ENST00000612350 Q5VV11 94 aa3.23□□□□□ -1.89
PTCHD3P1-201ENST00000612350 LCA10Q71F78 164 aa3.23□□□□□ -1.89
PTCHD3P1-201ENST00000612350 SMIM26A0A096LP01 95 aa3.22□□□□□ -1.89
PTCHD3P1-201ENST00000612350 DMAC1Q96GE9 116 aa3.21□□□□□ -1.9
PTCHD3P1-201ENST00000612350 CHKB-CPT1BH3BT56 60 aa3.2□□□□□ -1.9
PTCHD3P1-201ENST00000612350 ACYP2P14621 99 aa3.2□□□□□ -1.9
PTCHD3P1-201ENST00000612350 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
PTCHD3P1-201ENST00000612350 MT3P25713 68 aa3.19□□□□□ -1.9
PTCHD3P1-201ENST00000612350 COA5Q86WW8 74 aa3.17□□□□□ -1.9
PTCHD3P1-201ENST00000612350 H0YAA0 97 aa3.16□□□□□ -1.9
PTCHD3P1-201ENST00000612350 SPTSSBQ8NFR3 76 aa3.15□□□□□ -1.91
PTCHD3P1-201ENST00000612350 SPRR2GQ9BYE4 73 aa3.15□□□□□ -1.91
PTCHD3P1-201ENST00000612350 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
PTCHD3P1-201ENST00000612350 CRIPTQ9P021 101 aa3.13□□□□□ -1.91
PTCHD3P1-201ENST00000612350 PSPHP1O15172 72 aa3.12□□□□□ -1.91
PTCHD3P1-201ENST00000612350 Q1T7F1 81 aa3.11□□□□□ -1.91
PTCHD3P1-201ENST00000612350 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
PTCHD3P1-201ENST00000612350 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
PTCHD3P1-201ENST00000612350 ADM2Q7Z4H4 148 aa3.08□□□□□ -1.92
PTCHD3P1-201ENST00000612350 LINC01558Q9Y6Z2 57 aa3.06□□□□□ -1.92
PTCHD3P1-201ENST00000612350 A0A1B0GU69 56 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms