RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 MP68P56378 58 aa4.94□□□□□ -1.62
BRCA1-226ENST00000591534 SERP2Q8N6R1 65 aa4.94□□□□□ -1.62
BRCA1-226ENST00000591534 A0A087WVE0 104 aa4.93□□□□□ -1.62
BRCA1-226ENST00000591534 NDUFS5O43920 106 aa4.93□□□□□ -1.62
BRCA1-226ENST00000591534 WFDC13Q8IUB5 93 aa4.93□□□□□ -1.62
BRCA1-226ENST00000591534 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-226ENST00000591534 TRAV22A0A0B4J277 110 aa4.89□□□□□ -1.63
BRCA1-226ENST00000591534 NDUFC1O43677 76 aa4.89□□□□□ -1.63
BRCA1-226ENST00000591534 COX7CP15954 63 aa4.88□□□□□ -1.63
BRCA1-226ENST00000591534 OCR1Q9BZK8 76 aa4.88□□□□□ -1.63
BRCA1-226ENST00000591534 C20orf166-AS1Q96NR2 134 aa4.87□□□□□ -1.63
BRCA1-226ENST00000591534 LOC101927531A0A1B0GV80 90 aa4.85□□□□□ -1.63
BRCA1-226ENST00000591534 A8MUU9 505 aa4.85□□□□□ -1.63
BRCA1-226ENST00000591534 KRTAP16-1A8MUX0 517 aa4.82□□□□□ -1.64
BRCA1-226ENST00000591534 H0Y9P7 68 aa4.82□□□□□ -1.64
BRCA1-226ENST00000591534 KLKP1Q107X0 134 aa4.82□□□□□ -1.64
BRCA1-226ENST00000591534 ZCCHC13Q8WW36 166 aaKnown RBP4.82□□□□□ -1.64
BRCA1-226ENST00000591534 FAM236DA0A1B0GTK5 79 aa4.8□□□□□ -1.64
BRCA1-226ENST00000591534 FAM236CP0DP71 79 aa4.8□□□□□ -1.64
BRCA1-226ENST00000591534 C1orf64Q8NEQ6 169 aa4.8□□□□□ -1.64
BRCA1-226ENST00000591534 RBM12B-AS1Q9P1G2 102 aa4.79□□□□□ -1.64
BRCA1-226ENST00000591534 ATP5EP56381 51 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-226ENST00000591534 C7orf65Q6ZTY9 151 aa4.78□□□□□ -1.64
BRCA1-226ENST00000591534 C20orf197Q8N268 126 aa4.78□□□□□ -1.64
BRCA1-226ENST00000591534 LINC00208Q96KT6 92 aa4.78□□□□□ -1.64
BRCA1-226ENST00000591534 USH2AO75445 5202 aa4.75□□□□□ -1.65
BRCA1-226ENST00000591534 SPANXA2-OT1Q8N9U9 137 aa4.74□□□□□ -1.65
BRCA1-226ENST00000591534 TMEM258P61165 79 aa4.73□□□□□ -1.65
BRCA1-226ENST00000591534 Q5W150 140 aa4.73□□□□□ -1.65
BRCA1-226ENST00000591534 SSPOA2VEC9 5147 aa4.72□□□□□ -1.65
BRCA1-226ENST00000591534 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
BRCA1-226ENST00000591534 CYP4F30PQ9H0H9 118 aa4.72□□□□□ -1.65
BRCA1-226ENST00000591534 A8MUN3 132 aa4.71□□□□□ -1.66
BRCA1-226ENST00000591534 MT2AP02795 61 aa4.71□□□□□ -1.66
BRCA1-226ENST00000591534 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
BRCA1-226ENST00000591534 CCDC179H3BU77 68 aa4.69□□□□□ -1.66
BRCA1-226ENST00000591534 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
BRCA1-226ENST00000591534 SNURFQ9Y675 71 aa4.69□□□□□ -1.66
BRCA1-226ENST00000591534 FCGBPQ9Y6R7 5405 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-226ENST00000591534 SPINK7P58062 85 aa4.68□□□□□ -1.66
BRCA1-226ENST00000591534 H7BZZ5 65 aa4.66□□□□□ -1.66
BRCA1-226ENST00000591534 MT1FP04733 61 aa4.66□□□□□ -1.66
BRCA1-226ENST00000591534 HRES1P13985 223 aa4.66□□□□□ -1.66
BRCA1-226ENST00000591534 MT3P25713 68 aa4.66□□□□□ -1.66
BRCA1-226ENST00000591534 ACYP2P14621 99 aa4.64□□□□□ -1.67
BRCA1-226ENST00000591534 SPTSSBQ8NFR3 76 aa4.62□□□□□ -1.67
BRCA1-226ENST00000591534 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
BRCA1-226ENST00000591534 DMAC1Q96GE9 116 aa4.59□□□□□ -1.67
BRCA1-226ENST00000591534 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
BRCA1-226ENST00000591534 CHKB-CPT1BH3BT56 60 aa4.56□□□□□ -1.68
BRCA1-226ENST00000591534 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
BRCA1-226ENST00000591534 KRTAP19-6Q3LI70 58 aa4.56□□□□□ -1.68
BRCA1-226ENST00000591534 SERP1Q9Y6X1 66 aa4.56□□□□□ -1.68
BRCA1-226ENST00000591534 C4orf26Q17RF5 130 aa4.54□□□□□ -1.68
BRCA1-226ENST00000591534 H1FX-AS1Q4G0G2 97 aa4.52□□□□□ -1.69
BRCA1-226ENST00000591534 CYSTM1Q9H1C7 97 aa4.51□□□□□ -1.69
BRCA1-226ENST00000591534 V9GYY9 64 aa4.51□□□□□ -1.69
BRCA1-226ENST00000591534 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-226ENST00000591534 COA5Q86WW8 74 aa4.48□□□□□ -1.69
BRCA1-226ENST00000591534 KRTAP6-3Q3LI67 103 aa4.47□□□□□ -1.69
BRCA1-226ENST00000591534 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
BRCA1-226ENST00000591534 S4R3F8 94 aa4.46□□□□□ -1.7
BRCA1-226ENST00000591534 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
BRCA1-226ENST00000591534 SEC61GP60059 68 aa4.45□□□□□ -1.7
BRCA1-226ENST00000591534 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-226ENST00000591534 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
BRCA1-226ENST00000591534 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
BRCA1-226ENST00000591534 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
BRCA1-226ENST00000591534 Q1T7F1 81 aa4.36□□□□□ -1.71
BRCA1-226ENST00000591534 LCA10Q71F78 164 aa4.35□□□□□ -1.71
BRCA1-226ENST00000591534 A6NN06 94 aa4.34□□□□□ -1.71
BRCA1-226ENST00000591534 H0YAA0 97 aa4.34□□□□□ -1.71
BRCA1-226ENST00000591534 A0A1B0GU69 56 aa4.33□□□□□ -1.72
BRCA1-226ENST00000591534 LINC01558Q9Y6Z2 57 aa4.32□□□□□ -1.72
BRCA1-226ENST00000591534 Q5VV11 94 aa4.31□□□□□ -1.72
BRCA1-226ENST00000591534 NEBP20929 6669 aa4.31□□□□□ -1.72
BRCA1-226ENST00000591534 KRTAP10-12P60413 245 aa4.25□□□□□ -1.73
BRCA1-226ENST00000591534 CRIPTQ9P021 101 aa4.25□□□□□ -1.73
BRCA1-226ENST00000591534 MUC12Q9UKN1 5478 aa4.24□□□□□ -1.73
BRCA1-226ENST00000591534 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
BRCA1-226ENST00000591534 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
BRCA1-226ENST00000591534 UQCR11O14957 56 aa4.23□□□□□ -1.73
BRCA1-226ENST00000591534 MT1BP07438 61 aa4.22□□□□□ -1.73
BRCA1-226ENST00000591534 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
BRCA1-226ENST00000591534 M0QZ58 72 aa4.21□□□□□ -1.74
BRCA1-226ENST00000591534 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
BRCA1-226ENST00000591534 A0A1B0GU33 70 aa4.19□□□□□ -1.74
BRCA1-226ENST00000591534 ADM2Q7Z4H4 148 aa4.19□□□□□ -1.74
BRCA1-226ENST00000591534 PSPHP1O15172 72 aa4.18□□□□□ -1.74
BRCA1-226ENST00000591534 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
BRCA1-226ENST00000591534 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
BRCA1-226ENST00000591534 A6NED7 52 aa4.16□□□□□ -1.74
BRCA1-226ENST00000591534 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
BRCA1-226ENST00000591534 R4GN34 69 aa4.16□□□□□ -1.74
BRCA1-226ENST00000591534 MDN1Q9NU22 5596 aa4.15□□□□□ -1.74
BRCA1-226ENST00000591534 K7ERS5 55 aa4.14□□□□□ -1.75
BRCA1-226ENST00000591534 KMT2DO14686 5537 aa4.13□□□□□ -1.75
BRCA1-226ENST00000591534 MIR22HGQ0VDD5 57 aa4.11□□□□□ -1.75
BRCA1-226ENST00000591534 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
BRCA1-226ENST00000591534 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms