RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 Q96NJ1 140 aa5.74□□□□□ -1.49
SMARCE1-214ENST00000578112 BPY2O14599 106 aa5.73□□□□□ -1.49
SMARCE1-214ENST00000578112 OCR1Q9BZK8 76 aa5.72□□□□□ -1.49
SMARCE1-214ENST00000578112 H0YGX0 51 aa5.69□□□□□ -1.5
SMARCE1-214ENST00000578112 NDUFB1O75438 58 aa5.68□□□□□ -1.5
SMARCE1-214ENST00000578112 ORMDL1Q9P0S3 153 aa5.67□□□□□ -1.5
SMARCE1-214ENST00000578112 ZCCHC13Q8WW36 166 aaKnown RBP5.66□□□□□ -1.5
SMARCE1-214ENST00000578112 MT2AP02795 61 aa5.66□□□□□ -1.5
SMARCE1-214ENST00000578112 H3BQ85 93 aa5.64□□□□□ -1.51
SMARCE1-214ENST00000578112 CSAG1Q6PB30 78 aa5.64□□□□□ -1.51
SMARCE1-214ENST00000578112 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
SMARCE1-214ENST00000578112 A0A1W2PNM2 257 aa5.63□□□□□ -1.51
SMARCE1-214ENST00000578112 LINC00208Q96KT6 92 aa5.63□□□□□ -1.51
SMARCE1-214ENST00000578112 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
SMARCE1-214ENST00000578112 KRTAP19-1Q8IUB9 90 aa5.62□□□□□ -1.51
SMARCE1-214ENST00000578112 C8orf17Q9NRJ1 99 aa5.62□□□□□ -1.51
SMARCE1-214ENST00000578112 KRTAP9-3Q9BYQ3 159 aa5.61□□□□□ -1.51
SMARCE1-214ENST00000578112 A0A087WSZ3 146 aa5.6□□□□□ -1.51
SMARCE1-214ENST00000578112 LOC110117498A0A087WWA1 95 aa5.6□□□□□ -1.51
SMARCE1-214ENST00000578112 Q6ZQT0 140 aa5.6□□□□□ -1.51
SMARCE1-214ENST00000578112 HRES1P13985 223 aa5.6□□□□□ -1.51
SMARCE1-214ENST00000578112 PDE6GP18545 87 aa5.6□□□□□ -1.51
SMARCE1-214ENST00000578112 LUZP6Q538Z0 58 aa5.6□□□□□ -1.51
SMARCE1-214ENST00000578112 SPANXA2-OT1Q8N9U9 137 aa5.6□□□□□ -1.51
SMARCE1-214ENST00000578112 DSCR10P59022 87 aa5.59□□□□□ -1.51
SMARCE1-214ENST00000578112 MT1FP04733 61 aa5.58□□□□□ -1.52
SMARCE1-214ENST00000578112 A8MWP4 228 aa5.58□□□□□ -1.52
SMARCE1-214ENST00000578112 LCE2BO14633 110 aa5.58□□□□□ -1.52
SMARCE1-214ENST00000578112 USH2AO75445 5202 aa5.57□□□□□ -1.52
SMARCE1-214ENST00000578112 P0C880 135 aa5.57□□□□□ -1.52
SMARCE1-214ENST00000578112 K7ERS5 55 aa5.56□□□□□ -1.52
SMARCE1-214ENST00000578112 KRTAP10-10P60014 251 aa5.56□□□□□ -1.52
SMARCE1-214ENST00000578112 SSPOA2VEC9 5147 aa5.55□□□□□ -1.52
SMARCE1-214ENST00000578112 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
SMARCE1-214ENST00000578112 IGKV4-1P06312 121 aa5.53□□□□□ -1.52
SMARCE1-214ENST00000578112 SPINK7P58062 85 aa5.53□□□□□ -1.52
SMARCE1-214ENST00000578112 LINC00472Q9H8W2 130 aa5.51□□□□□ -1.53
SMARCE1-214ENST00000578112 FCGBPQ9Y6R7 5405 aaPredicted RBP5.49□□□□□ -1.53
SMARCE1-214ENST00000578112 H0Y9P7 68 aa5.47□□□□□ -1.53
SMARCE1-214ENST00000578112 A0A1B0GVX0 72 aa5.46□□□□□ -1.54
SMARCE1-214ENST00000578112 KRTAP6-3Q3LI67 103 aa5.44□□□□□ -1.54
SMARCE1-214ENST00000578112 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
SMARCE1-214ENST00000578112 COA5Q86WW8 74 aa5.43□□□□□ -1.54
SMARCE1-214ENST00000578112 H3BPC8 53 aa5.42□□□□□ -1.54
SMARCE1-214ENST00000578112 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
SMARCE1-214ENST00000578112 NDUFAF8A1L188 74 aa5.38□□□□□ -1.55
SMARCE1-214ENST00000578112 DEFB116Q30KQ4 102 aa5.36□□□□□ -1.55
SMARCE1-214ENST00000578112 WFDC13Q8IUB5 93 aa5.35□□□□□ -1.55
SMARCE1-214ENST00000578112 DMAC1Q96GE9 116 aa5.35□□□□□ -1.55
SMARCE1-214ENST00000578112 CAMK2N1Q7Z7J9 78 aa5.34□□□□□ -1.55
SMARCE1-214ENST00000578112 UQCR11O14957 56 aa5.33□□□□□ -1.56
SMARCE1-214ENST00000578112 Q8N9L7 120 aa5.32□□□□□ -1.56
SMARCE1-214ENST00000578112 H1FX-AS1Q4G0G2 97 aa5.31□□□□□ -1.56
SMARCE1-214ENST00000578112 MACF1Q9UPN3 7388 aaKnown RBP5.3□□□□□ -1.56
SMARCE1-214ENST00000578112 Q5W150 140 aa5.25□□□□□ -1.57
SMARCE1-214ENST00000578112 MRPL34Q9BQ48 92 aaKnown RBP5.23□□□□□ -1.57
SMARCE1-214ENST00000578112 SYNE2Q8WXH0 6885 aaKnown RBP5.23□□□□□ -1.57
SMARCE1-214ENST00000578112 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
SMARCE1-214ENST00000578112 MMP24-AS1A0A0U1RRL7 71 aa5.19□□□□□ -1.58
SMARCE1-214ENST00000578112 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
SMARCE1-214ENST00000578112 SPINT4Q6UDR6 99 aa5.15□□□□□ -1.58
SMARCE1-214ENST00000578112 A0A1B0GU69 56 aa5.15□□□□□ -1.59
SMARCE1-214ENST00000578112 NEBP20929 6669 aa5.14□□□□□ -1.59
SMARCE1-214ENST00000578112 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
SMARCE1-214ENST00000578112 KRTAP20-1Q3LI63 56 aa5.12□□□□□ -1.59
SMARCE1-214ENST00000578112 SPRR2GQ9BYE4 73 aa5.11□□□□□ -1.59
SMARCE1-214ENST00000578112 IGKV2D-30A0A075B6S6 120 aa5.09□□□□□ -1.59
SMARCE1-214ENST00000578112 IGKV2-30P06310 120 aa5.09□□□□□ -1.59
SMARCE1-214ENST00000578112 MT1BP07438 61 aa5.09□□□□□ -1.59
SMARCE1-214ENST00000578112 KRTAP5-9P26371 169 aa5.09□□□□□ -1.59
SMARCE1-214ENST00000578112 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
SMARCE1-214ENST00000578112 K7EQZ3 153 aa5.07□□□□□ -1.6
SMARCE1-214ENST00000578112 S4R3F8 94 aa5.05□□□□□ -1.6
SMARCE1-214ENST00000578112 CRIPTQ9P021 101 aa5.04□□□□□ -1.6
SMARCE1-214ENST00000578112 A0A1B0GU33 70 aa5.02□□□□□ -1.61
SMARCE1-214ENST00000578112 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
SMARCE1-214ENST00000578112 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
SMARCE1-214ENST00000578112 ACYP2P14621 99 aa4.96□□□□□ -1.62
SMARCE1-214ENST00000578112 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.62
SMARCE1-214ENST00000578112 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
SMARCE1-214ENST00000578112 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
SMARCE1-214ENST00000578112 TP53AIP1Q9HCN2 124 aa4.94□□□□□ -1.62
SMARCE1-214ENST00000578112 H0YAA0 97 aa4.88□□□□□ -1.63
SMARCE1-214ENST00000578112 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
SMARCE1-214ENST00000578112 KRTAP3-3Q9BYR6 98 aa4.86□□□□□ -1.63
SMARCE1-214ENST00000578112 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
SMARCE1-214ENST00000578112 SPRR2EP22531 72 aa4.79□□□□□ -1.64
SMARCE1-214ENST00000578112 SPRR2BP35325 72 aa4.79□□□□□ -1.64
SMARCE1-214ENST00000578112 SPRR2AP35326 72 aa4.79□□□□□ -1.64
SMARCE1-214ENST00000578112 KRTAP12-2P59991 146 aa4.77□□□□□ -1.65
SMARCE1-214ENST00000578112 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
SMARCE1-214ENST00000578112 KRTAP2-2Q9BYT5 123 aa4.77□□□□□ -1.65
SMARCE1-214ENST00000578112 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
SMARCE1-214ENST00000578112 KMT2DO14686 5537 aa4.73□□□□□ -1.65
SMARCE1-214ENST00000578112 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
SMARCE1-214ENST00000578112 R4GN34 69 aa4.72□□□□□ -1.65
SMARCE1-214ENST00000578112 PLAC4Q8WY50 150 aa4.71□□□□□ -1.65
SMARCE1-214ENST00000578112 MT1XP80297 61 aa4.71□□□□□ -1.66
SMARCE1-214ENST00000578112 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
SMARCE1-214ENST00000578112 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms