RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 C9JAW5 83 aa2.18□□□□□ -2.06
HIF1A-209ENST00000556827 H1FX-AS1Q4G0G2 97 aa2.18□□□□□ -2.06
HIF1A-209ENST00000556827 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
HIF1A-209ENST00000556827 USH2AO75445 5202 aa2.18□□□□□ -2.06
HIF1A-209ENST00000556827 SCGB1C2P0DMR2 95 aa2.17□□□□□ -2.06
HIF1A-209ENST00000556827 KRTAP12-4P60329 112 aa2.17□□□□□ -2.06
HIF1A-209ENST00000556827 SPATA45Q537H7 98 aa2.17□□□□□ -2.06
HIF1A-209ENST00000556827 VAMP8Q9BV40 100 aa2.17□□□□□ -2.06
HIF1A-209ENST00000556827 PSPHP1O15172 72 aa2.16□□□□□ -2.06
HIF1A-209ENST00000556827 FAM236AA0A1B0GUQ0 79 aa2.15□□□□□ -2.07
HIF1A-209ENST00000556827 FAM236BA0A1B0GV22 79 aa2.15□□□□□ -2.07
HIF1A-209ENST00000556827 A0A1B0GW54 56 aa2.15□□□□□ -2.07
HIF1A-209ENST00000556827 A6NN06 94 aa2.15□□□□□ -2.07
HIF1A-209ENST00000556827 NDUFS5O43920 106 aa2.15□□□□□ -2.07
HIF1A-209ENST00000556827 Q6ZQT0 140 aa2.15□□□□□ -2.07
HIF1A-209ENST00000556827 R4GN34 69 aa2.15□□□□□ -2.07
HIF1A-209ENST00000556827 BAALC-AS2P0C853 105 aa2.14□□□□□ -2.07
HIF1A-209ENST00000556827 PDE6GP18545 87 aa2.14□□□□□ -2.07
HIF1A-209ENST00000556827 FXYD2P54710 66 aa2.14□□□□□ -2.07
HIF1A-209ENST00000556827 C2orf91Q6ZV80 131 aa2.14□□□□□ -2.07
HIF1A-209ENST00000556827 SSPOA2VEC9 5147 aa2.13□□□□□ -2.07
HIF1A-209ENST00000556827 JMJD7-PLA2G4BH0Y9G9 81 aa2.13□□□□□ -2.07
HIF1A-209ENST00000556827 HSD52Q0P140 79 aa2.13□□□□□ -2.07
HIF1A-209ENST00000556827 NREPQ16612 68 aa2.13□□□□□ -2.07
HIF1A-209ENST00000556827 KRTAP20-1Q3LI63 56 aa2.13□□□□□ -2.07
HIF1A-209ENST00000556827 K7ERJ3 54 aa2.12□□□□□ -2.07
HIF1A-209ENST00000556827 Q5VV11 94 aa2.12□□□□□ -2.07
HIF1A-209ENST00000556827 PRR15Q8IV56 129 aa2.12□□□□□ -2.07
HIF1A-209ENST00000556827 MRPL34Q9BQ48 92 aaKnown RBP2.12□□□□□ -2.07
HIF1A-209ENST00000556827 hDV103S1A0JD37 113 aa2.11□□□□□ -2.07
HIF1A-209ENST00000556827 ATXN8Q156A1 80 aa2.11□□□□□ -2.07
HIF1A-209ENST00000556827 C7orf65Q6ZTY9 151 aa2.11□□□□□ -2.07
HIF1A-209ENST00000556827 TMEM254Q8TBM7 123 aa2.11□□□□□ -2.07
HIF1A-209ENST00000556827 IMUPQ9GZP8 106 aa2.11□□□□□ -2.07
HIF1A-209ENST00000556827 LOC110117498A0A087WWA1 95 aa2.1□□□□□ -2.07
HIF1A-209ENST00000556827 CSAG1Q6PB30 78 aa2.1□□□□□ -2.07
HIF1A-209ENST00000556827 MACF1Q9UPN3 7388 aaKnown RBP2.09□□□□□ -2.08
HIF1A-209ENST00000556827 SYNE2Q8WXH0 6885 aaKnown RBP2.08□□□□□ -2.08
HIF1A-209ENST00000556827 MMP24-AS1A0A0U1RRL7 71 aa2.08□□□□□ -2.08
HIF1A-209ENST00000556827 C4orf26Q17RF5 130 aa2.08□□□□□ -2.08
HIF1A-209ENST00000556827 C14orf132Q9NPU4 83 aa2.08□□□□□ -2.08
HIF1A-209ENST00000556827 UQCR10Q9UDW1 63 aa2.08□□□□□ -2.08
HIF1A-209ENST00000556827 CASC2Q6XLA1 102 aa2.07□□□□□ -2.08
HIF1A-209ENST00000556827 S4R3F8 94 aa2.07□□□□□ -2.08
HIF1A-209ENST00000556827 K7EQZ3 153 aa2.06□□□□□ -2.08
HIF1A-209ENST00000556827 HCG22E2RYF7 251 aa2.05□□□□□ -2.08
HIF1A-209ENST00000556827 M0R143 59 aa2.05□□□□□ -2.08
HIF1A-209ENST00000556827 SPRR2GQ9BYE4 73 aa2.05□□□□□ -2.08
HIF1A-209ENST00000556827 TSTD3H0UI37 97 aa2.04□□□□□ -2.08
HIF1A-209ENST00000556827 MT1BP07438 61 aa2.04□□□□□ -2.08
HIF1A-209ENST00000556827 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
HIF1A-209ENST00000556827 KLKP1Q107X0 134 aa2.04□□□□□ -2.08
HIF1A-209ENST00000556827 KRTAP25-1Q3LHN0 102 aa2.04□□□□□ -2.08
HIF1A-209ENST00000556827 KRTAP19-8Q3LI54 63 aa2.04□□□□□ -2.08
HIF1A-209ENST00000556827 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
HIF1A-209ENST00000556827 CRIPTQ9P021 101 aa2.04□□□□□ -2.08
HIF1A-209ENST00000556827 PRO2289Q9P1D8 64 aa2.03□□□□□ -2.08
HIF1A-209ENST00000556827 PYY3Q5JQD4 70 aa2.02□□□□□ -2.09
HIF1A-209ENST00000556827 LCA10Q71F78 164 aa2.02□□□□□ -2.09
HIF1A-209ENST00000556827 NAA38Q9BRA0 125 aaKnown RBP2.02□□□□□ -2.09
HIF1A-209ENST00000556827 H3BT86 120 aa2□□□□□ -2.09
HIF1A-209ENST00000556827 SPRR2EP22531 72 aa2□□□□□ -2.09
HIF1A-209ENST00000556827 SPRR2BP35325 72 aa2□□□□□ -2.09
HIF1A-209ENST00000556827 SPRR2AP35326 72 aa2□□□□□ -2.09
HIF1A-209ENST00000556827 SPRR2FQ96RM1 72 aa2□□□□□ -2.09
HIF1A-209ENST00000556827 UBL5Q9BZL1 73 aa2□□□□□ -2.09
HIF1A-209ENST00000556827 TP53AIP1Q9HCN2 124 aa2□□□□□ -2.09
HIF1A-209ENST00000556827 NDUFC1O43677 76 aa1.98□□□□□ -2.09
HIF1A-209ENST00000556827 PLAC4Q8WY50 150 aa1.98□□□□□ -2.09
HIF1A-209ENST00000556827 PRO0628Q9UI54 55 aa1.98□□□□□ -2.09
HIF1A-209ENST00000556827 NEBP20929 6669 aa1.98□□□□□ -2.09
HIF1A-209ENST00000556827 BATFQ16520 125 aa1.97□□□□□ -2.09
HIF1A-209ENST00000556827 KRTAP8-1Q8IUC2 63 aa1.97□□□□□ -2.09
HIF1A-209ENST00000556827 KRTAP2-1Q9BYU5 128 aa1.97□□□□□ -2.09
HIF1A-209ENST00000556827 FAM240AA0A1B0GVK7 77 aa1.96□□□□□ -2.1
HIF1A-209ENST00000556827 A8MUN3 132 aa1.95□□□□□ -2.1
HIF1A-209ENST00000556827 H0YAA0 97 aa1.95□□□□□ -2.1
HIF1A-209ENST00000556827 LOC101927531A0A1B0GV80 90 aa1.94□□□□□ -2.1
HIF1A-209ENST00000556827 A0A1W2PPM0 123 aa1.94□□□□□ -2.1
HIF1A-209ENST00000556827 ACYP1P07311 99 aa1.94□□□□□ -2.1
HIF1A-209ENST00000556827 SPRR2DP22532 72 aa1.94□□□□□ -2.1
HIF1A-209ENST00000556827 CYP4F30PQ9H0H9 118 aa1.94□□□□□ -2.1
HIF1A-209ENST00000556827 TRAV22A0A0B4J277 110 aa1.93□□□□□ -2.1
HIF1A-209ENST00000556827 C20orf197Q8N268 126 aa1.93□□□□□ -2.1
HIF1A-209ENST00000556827 KMT2DO14686 5537 aa1.91□□□□□ -2.1
HIF1A-209ENST00000556827 ATOX1O00244 68 aa1.91□□□□□ -2.1
HIF1A-209ENST00000556827 SPCS1Q9Y6A9 102 aa1.91□□□□□ -2.1
HIF1A-209ENST00000556827 A0A087WVE0 104 aa1.9□□□□□ -2.11
HIF1A-209ENST00000556827 K7ERS5 55 aa1.9□□□□□ -2.11
HIF1A-209ENST00000556827 MUC12Q9UKN1 5478 aa1.9□□□□□ -2.11
HIF1A-209ENST00000556827 K7EP34 96 aa1.89□□□□□ -2.11
HIF1A-209ENST00000556827 TAX1BP3O14907 124 aa1.89□□□□□ -2.11
HIF1A-209ENST00000556827 UQCRQO14949 82 aa1.89□□□□□ -2.11
HIF1A-209ENST00000556827 SMIM6P0DI80 62 aa1.89□□□□□ -2.11
HIF1A-209ENST00000556827 MT1XP80297 61 aa1.89□□□□□ -2.11
HIF1A-209ENST00000556827 MDN1Q9NU22 5596 aa1.88□□□□□ -2.11
HIF1A-209ENST00000556827 M0QZ58 72 aa1.88□□□□□ -2.11
HIF1A-209ENST00000556827 LINC01554Q52M75 96 aa1.88□□□□□ -2.11
HIF1A-209ENST00000556827 H0Y9P7 68 aa1.87□□□□□ -2.11
HIF1A-209ENST00000556827 KRTAP12-1P59990 96 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms