RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 C1orf195Q5TG92 126 aa3.88□□□□□ -1.79
SLIRP-204ENST00000555890 TP53AIP1Q9HCN2 124 aa3.88□□□□□ -1.79
SLIRP-204ENST00000555890 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
SLIRP-204ENST00000555890 TMEM258P61165 79 aa3.87□□□□□ -1.79
SLIRP-204ENST00000555890 PRR4Q16378 134 aa3.87□□□□□ -1.79
SLIRP-204ENST00000555890 MRPL34Q9BQ48 92 aaKnown RBP3.87□□□□□ -1.79
SLIRP-204ENST00000555890 SNURFQ9Y675 71 aa3.87□□□□□ -1.79
SLIRP-204ENST00000555890 MUC17Q685J3 4493 aa3.86□□□□□ -1.79
SLIRP-204ENST00000555890 MUC12Q9UKN1 5478 aa3.86□□□□□ -1.79
SLIRP-204ENST00000555890 NDUFS5O43920 106 aa3.86□□□□□ -1.79
SLIRP-204ENST00000555890 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
SLIRP-204ENST00000555890 LINC00313P59037 77 aa3.86□□□□□ -1.79
SLIRP-204ENST00000555890 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
SLIRP-204ENST00000555890 H3BPC8 53 aa3.85□□□□□ -1.79
SLIRP-204ENST00000555890 H0Y9P7 68 aa3.84□□□□□ -1.79
SLIRP-204ENST00000555890 CYSTM1Q9H1C7 97 aa3.84□□□□□ -1.79
SLIRP-204ENST00000555890 TRAV22A0A0B4J277 110 aa3.83□□□□□ -1.8
SLIRP-204ENST00000555890 H7BZZ5 65 aa3.83□□□□□ -1.8
SLIRP-204ENST00000555890 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
SLIRP-204ENST00000555890 FAM236DA0A1B0GTK5 79 aa3.82□□□□□ -1.8
SLIRP-204ENST00000555890 FAM236CP0DP71 79 aa3.82□□□□□ -1.8
SLIRP-204ENST00000555890 LINC00208Q96KT6 92 aa3.82□□□□□ -1.8
SLIRP-204ENST00000555890 ATP5EP56381 51 aaPredicted RBP3.81□□□□□ -1.8
SLIRP-204ENST00000555890 C1orf64Q8NEQ6 169 aa3.81□□□□□ -1.8
SLIRP-204ENST00000555890 ZCCHC13Q8WW36 166 aaKnown RBP3.81□□□□□ -1.8
SLIRP-204ENST00000555890 RPS28P62857 69 aaKnown RBP3.78□□□□□ -1.8
SLIRP-204ENST00000555890 LOC101927531A0A1B0GV80 90 aa3.77□□□□□ -1.81
SLIRP-204ENST00000555890 KRTAP16-1A8MUX0 517 aa3.77□□□□□ -1.81
SLIRP-204ENST00000555890 SERP1Q9Y6X1 66 aa3.76□□□□□ -1.81
SLIRP-204ENST00000555890 SPANXA2-OT1Q8N9U9 137 aa3.75□□□□□ -1.81
SLIRP-204ENST00000555890 Q5W150 140 aa3.74□□□□□ -1.81
SLIRP-204ENST00000555890 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
SLIRP-204ENST00000555890 FP248Q71RG6 208 aaPredicted RBP3.73□□□□□ -1.81
SLIRP-204ENST00000555890 RETNLBQ9BQ08 111 aa3.73□□□□□ -1.81
SLIRP-204ENST00000555890 C9orf92A6NGG3 77 aa3.72□□□□□ -1.81
SLIRP-204ENST00000555890 PCOTHQ58A44 107 aa3.72□□□□□ -1.81
SLIRP-204ENST00000555890 CYP4F30PQ9H0H9 118 aa3.72□□□□□ -1.81
SLIRP-204ENST00000555890 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
SLIRP-204ENST00000555890 A8MUU9 505 aa3.7□□□□□ -1.82
SLIRP-204ENST00000555890 C20orf166-AS1Q96NR2 134 aa3.7□□□□□ -1.82
SLIRP-204ENST00000555890 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
SLIRP-204ENST00000555890 V9GYY9 64 aa3.69□□□□□ -1.82
SLIRP-204ENST00000555890 SMIM26A0A096LP01 95 aa3.68□□□□□ -1.82
SLIRP-204ENST00000555890 MDN1Q9NU22 5596 aa3.68□□□□□ -1.82
SLIRP-204ENST00000555890 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
SLIRP-204ENST00000555890 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
SLIRP-204ENST00000555890 HRES1P13985 223 aa3.66□□□□□ -1.82
SLIRP-204ENST00000555890 KRTAP10-6P60371 365 aaPredicted RBP3.66□□□□□ -1.82
SLIRP-204ENST00000555890 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
SLIRP-204ENST00000555890 C7orf65Q6ZTY9 151 aa3.66□□□□□ -1.82
SLIRP-204ENST00000555890 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.83
SLIRP-204ENST00000555890 ATP11AUNQ6ZP68 121 aa3.64□□□□□ -1.83
SLIRP-204ENST00000555890 ACYP2P14621 99 aa3.63□□□□□ -1.83
SLIRP-204ENST00000555890 RPL37P61927 97 aaKnown RBP3.62□□□□□ -1.83
SLIRP-204ENST00000555890 COA5Q86WW8 74 aa3.62□□□□□ -1.83
SLIRP-204ENST00000555890 MT3P25713 68 aa3.61□□□□□ -1.83
SLIRP-204ENST00000555890 DMAC1Q96GE9 116 aa3.61□□□□□ -1.83
SLIRP-204ENST00000555890 SPINK7P58062 85 aa3.6□□□□□ -1.83
SLIRP-204ENST00000555890 CHKB-CPT1BH3BT56 60 aa3.59□□□□□ -1.83
SLIRP-204ENST00000555890 TPRXLQ17RH7 258 aa3.59□□□□□ -1.83
SLIRP-204ENST00000555890 A8MUN3 132 aa3.58□□□□□ -1.84
SLIRP-204ENST00000555890 CAMK2N1Q7Z7J9 78 aa3.58□□□□□ -1.84
SLIRP-204ENST00000555890 Q1T7F1 81 aa3.57□□□□□ -1.84
SLIRP-204ENST00000555890 C4orf26Q17RF5 130 aa3.56□□□□□ -1.84
SLIRP-204ENST00000555890 MT1HP80294 61 aa3.55□□□□□ -1.84
SLIRP-204ENST00000555890 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
SLIRP-204ENST00000555890 COX6B2Q6YFQ2 88 aa3.53□□□□□ -1.84
SLIRP-204ENST00000555890 SPTSSBQ8NFR3 76 aa3.53□□□□□ -1.84
SLIRP-204ENST00000555890 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
SLIRP-204ENST00000555890 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
SLIRP-204ENST00000555890 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
SLIRP-204ENST00000555890 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
SLIRP-204ENST00000555890 KRTAP19-2Q3LHN2 52 aa3.5□□□□□ -1.85
SLIRP-204ENST00000555890 PRR15LQ9BU68 103 aa3.5□□□□□ -1.85
SLIRP-204ENST00000555890 PSPHP1O15172 72 aa3.49□□□□□ -1.85
SLIRP-204ENST00000555890 M0R2T5 61 aa3.47□□□□□ -1.85
SLIRP-204ENST00000555890 RBM12B-AS1Q9P1G2 102 aa3.46□□□□□ -1.86
SLIRP-204ENST00000555890 A0A1B0GU69 56 aa3.45□□□□□ -1.86
SLIRP-204ENST00000555890 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
SLIRP-204ENST00000555890 Q5VV11 94 aa3.44□□□□□ -1.86
SLIRP-204ENST00000555890 H1FX-AS1Q4G0G2 97 aa3.43□□□□□ -1.86
SLIRP-204ENST00000555890 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
SLIRP-204ENST00000555890 A6NED7 52 aa3.41□□□□□ -1.86
SLIRP-204ENST00000555890 BRK1Q8WUW1 75 aa3.41□□□□□ -1.86
SLIRP-204ENST00000555890 S4R3F8 94 aa3.41□□□□□ -1.86
SLIRP-204ENST00000555890 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
SLIRP-204ENST00000555890 PRO0628Q9UI54 55 aa3.39□□□□□ -1.87
SLIRP-204ENST00000555890 LCA10Q71F78 164 aa3.38□□□□□ -1.87
SLIRP-204ENST00000555890 UQCR11O14957 56 aa3.36□□□□□ -1.87
SLIRP-204ENST00000555890 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
SLIRP-204ENST00000555890 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
SLIRP-204ENST00000555890 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
SLIRP-204ENST00000555890 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
SLIRP-204ENST00000555890 CSAG1Q6PB30 78 aa3.35□□□□□ -1.87
SLIRP-204ENST00000555890 CDC42SE1Q9NRR8 79 aa3.35□□□□□ -1.87
SLIRP-204ENST00000555890 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
SLIRP-204ENST00000555890 A0A1B0GU33 70 aa3.33□□□□□ -1.88
SLIRP-204ENST00000555890 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
SLIRP-204ENST00000555890 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
SLIRP-204ENST00000555890 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms