RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 hDV103S1A0JD37 113 aa4.67□□□□□ -1.66
ACTN1-208ENST00000553370 MMP24-AS1A0A0U1RRL7 71 aa4.66□□□□□ -1.66
ACTN1-208ENST00000553370 FAM236AA0A1B0GUQ0 79 aa4.66□□□□□ -1.66
ACTN1-208ENST00000553370 FAM236BA0A1B0GV22 79 aa4.66□□□□□ -1.66
ACTN1-208ENST00000553370 CXCL6P80162 114 aa4.66□□□□□ -1.66
ACTN1-208ENST00000553370 C7orf65Q6ZTY9 151 aa4.66□□□□□ -1.66
ACTN1-208ENST00000553370 K7EQZ3 153 aa4.63□□□□□ -1.67
ACTN1-208ENST00000553370 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
ACTN1-208ENST00000553370 UBL5Q9BZL1 73 aa4.63□□□□□ -1.67
ACTN1-208ENST00000553370 LINC00643Q86TS7 51 aa4.62□□□□□ -1.67
ACTN1-208ENST00000553370 BPY2O14599 106 aa4.61□□□□□ -1.67
ACTN1-208ENST00000553370 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
ACTN1-208ENST00000553370 MT3P25713 68 aa4.59□□□□□ -1.67
ACTN1-208ENST00000553370 C5orf47Q569G3 176 aa4.59□□□□□ -1.67
ACTN1-208ENST00000553370 HCG22E2RYF7 251 aa4.58□□□□□ -1.68
ACTN1-208ENST00000553370 C4orf26Q17RF5 130 aa4.58□□□□□ -1.68
ACTN1-208ENST00000553370 ATP5EP2Q5VTU8 51 aa4.58□□□□□ -1.68
ACTN1-208ENST00000553370 A6NN06 94 aa4.57□□□□□ -1.68
ACTN1-208ENST00000553370 CASC2Q6XLA1 102 aa4.57□□□□□ -1.68
ACTN1-208ENST00000553370 IMUPQ9GZP8 106 aa4.57□□□□□ -1.68
ACTN1-208ENST00000553370 Q5W150 140 aa4.55□□□□□ -1.68
ACTN1-208ENST00000553370 S4R3F8 94 aa4.55□□□□□ -1.68
ACTN1-208ENST00000553370 Q5VV11 94 aa4.54□□□□□ -1.68
ACTN1-208ENST00000553370 Q8N9L7 120 aa4.54□□□□□ -1.68
ACTN1-208ENST00000553370 MT-ATP8P03928 68 aa4.53□□□□□ -1.68
ACTN1-208ENST00000553370 CSAG1Q6PB30 78 aa4.52□□□□□ -1.69
ACTN1-208ENST00000553370 NEBP20929 6669 aa4.51□□□□□ -1.69
ACTN1-208ENST00000553370 C1orf64Q8NEQ6 169 aa4.48□□□□□ -1.69
ACTN1-208ENST00000553370 SCGB1A1P11684 91 aa4.47□□□□□ -1.69
ACTN1-208ENST00000553370 HIST1H4AP62805 103 aaKnown RBP4.47□□□□□ -1.69
ACTN1-208ENST00000553370 LCA10Q71F78 164 aa4.46□□□□□ -1.7
ACTN1-208ENST00000553370 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
ACTN1-208ENST00000553370 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
ACTN1-208ENST00000553370 MT1BP07438 61 aa4.43□□□□□ -1.7
ACTN1-208ENST00000553370 A0A087WVE0 104 aa4.42□□□□□ -1.7
ACTN1-208ENST00000553370 KLKP1Q107X0 134 aa4.42□□□□□ -1.7
ACTN1-208ENST00000553370 SPRR2GQ9BYE4 73 aa4.42□□□□□ -1.7
ACTN1-208ENST00000553370 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
ACTN1-208ENST00000553370 KRTAP10-5P60370 271 aa4.4□□□□□ -1.71
ACTN1-208ENST00000553370 SMIM20Q8N5G0 67 aa4.4□□□□□ -1.71
ACTN1-208ENST00000553370 TP53AIP1Q9HCN2 124 aa4.4□□□□□ -1.71
ACTN1-208ENST00000553370 ATOX1O00244 68 aa4.39□□□□□ -1.71
ACTN1-208ENST00000553370 CRIPTQ9P021 101 aa4.36□□□□□ -1.71
ACTN1-208ENST00000553370 TRAV7A0A075B6U4 112 aa4.35□□□□□ -1.71
ACTN1-208ENST00000553370 UQCRQO14949 82 aa4.33□□□□□ -1.72
ACTN1-208ENST00000553370 SERP2Q8N6R1 65 aa4.33□□□□□ -1.72
ACTN1-208ENST00000553370 MDN1Q9NU22 5596 aa4.32□□□□□ -1.72
ACTN1-208ENST00000553370 KMT2DO14686 5537 aa4.32□□□□□ -1.72
ACTN1-208ENST00000553370 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
ACTN1-208ENST00000553370 ANAPC13Q9BS18 74 aa4.32□□□□□ -1.72
ACTN1-208ENST00000553370 TRAV22A0A0B4J277 110 aa4.3□□□□□ -1.72
ACTN1-208ENST00000553370 LOC101927531A0A1B0GV80 90 aa4.3□□□□□ -1.72
ACTN1-208ENST00000553370 NDUFC1O43677 76 aa4.3□□□□□ -1.72
ACTN1-208ENST00000553370 COX7CP15954 63 aa4.3□□□□□ -1.72
ACTN1-208ENST00000553370 CYP4F30PQ9H0H9 118 aa4.3□□□□□ -1.72
ACTN1-208ENST00000553370 H3BPC8 53 aa4.28□□□□□ -1.72
ACTN1-208ENST00000553370 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
ACTN1-208ENST00000553370 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
ACTN1-208ENST00000553370 A8MUN3 132 aa4.26□□□□□ -1.73
ACTN1-208ENST00000553370 MP68P56378 58 aa4.26□□□□□ -1.73
ACTN1-208ENST00000553370 SPRR2FQ96RM1 72 aa4.26□□□□□ -1.73
ACTN1-208ENST00000553370 SPRR2EP22531 72 aa4.25□□□□□ -1.73
ACTN1-208ENST00000553370 SPRR2BP35325 72 aa4.25□□□□□ -1.73
ACTN1-208ENST00000553370 SPRR2AP35326 72 aa4.25□□□□□ -1.73
ACTN1-208ENST00000553370 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
ACTN1-208ENST00000553370 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
ACTN1-208ENST00000553370 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
ACTN1-208ENST00000553370 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
ACTN1-208ENST00000553370 H0Y9P7 68 aa4.23□□□□□ -1.73
ACTN1-208ENST00000553370 ADM2Q7Z4H4 148 aa4.23□□□□□ -1.73
ACTN1-208ENST00000553370 C20orf197Q8N268 126 aa4.22□□□□□ -1.73
ACTN1-208ENST00000553370 H0YAA0 97 aa4.21□□□□□ -1.74
ACTN1-208ENST00000553370 CCDC179H3BU77 68 aa4.21□□□□□ -1.74
ACTN1-208ENST00000553370 LINC00208Q96KT6 92 aa4.21□□□□□ -1.74
ACTN1-208ENST00000553370 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
ACTN1-208ENST00000553370 R4GN34 69 aa4.18□□□□□ -1.74
ACTN1-208ENST00000553370 SNURFQ9Y675 71 aa4.17□□□□□ -1.74
ACTN1-208ENST00000553370 V9GYY9 64 aa4.16□□□□□ -1.74
ACTN1-208ENST00000553370 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
ACTN1-208ENST00000553370 H7BZZ5 65 aa4.14□□□□□ -1.75
ACTN1-208ENST00000553370 M0QZ58 72 aa4.14□□□□□ -1.75
ACTN1-208ENST00000553370 MT1XP80297 61 aa4.14□□□□□ -1.75
ACTN1-208ENST00000553370 SPANXA2-OT1Q8N9U9 137 aa4.13□□□□□ -1.75
ACTN1-208ENST00000553370 LINC01554Q52M75 96 aa4.12□□□□□ -1.75
ACTN1-208ENST00000553370 CYSTM1Q9H1C7 97 aa4.12□□□□□ -1.75
ACTN1-208ENST00000553370 SPRR2DP22532 72 aa4.11□□□□□ -1.75
ACTN1-208ENST00000553370 TMEM258P61165 79 aa4.1□□□□□ -1.75
ACTN1-208ENST00000553370 ATP5EP56381 51 aaPredicted RBP4.09□□□□□ -1.75
ACTN1-208ENST00000553370 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
ACTN1-208ENST00000553370 SMIM26A0A096LP01 95 aa4.07□□□□□ -1.76
ACTN1-208ENST00000553370 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
ACTN1-208ENST00000553370 P0C880 135 aa4.06□□□□□ -1.76
ACTN1-208ENST00000553370 ACYP2P14621 99 aa4.03□□□□□ -1.76
ACTN1-208ENST00000553370 DMAC1Q96GE9 116 aa4.03□□□□□ -1.76
ACTN1-208ENST00000553370 RPS28P62857 69 aaKnown RBP4.01□□□□□ -1.77
ACTN1-208ENST00000553370 SERP1Q9Y6X1 66 aa3.98□□□□□ -1.77
ACTN1-208ENST00000553370 PSPHP1O15172 72 aa3.97□□□□□ -1.77
ACTN1-208ENST00000553370 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.78
ACTN1-208ENST00000553370 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
ACTN1-208ENST00000553370 SPTSSBQ8NFR3 76 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms