RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
GABPB1-206ENST00000543881 SPINK7P58062 85 aa5.8□□□□□ -1.48
GABPB1-206ENST00000543881 Q8N9P0 234 aaPredicted RBP5.79□□□□□ -1.48
GABPB1-206ENST00000543881 TMEM254Q8TBM7 123 aa5.78□□□□□ -1.48
GABPB1-206ENST00000543881 hDV103S1A0JD37 113 aa5.77□□□□□ -1.49
GABPB1-206ENST00000543881 SNURFQ9Y675 71 aa5.77□□□□□ -1.49
GABPB1-206ENST00000543881 C8orf17Q9NRJ1 99 aa5.76□□□□□ -1.49
GABPB1-206ENST00000543881 A8MWP4 228 aa5.75□□□□□ -1.49
GABPB1-206ENST00000543881 NDUFB1O75438 58 aa5.75□□□□□ -1.49
GABPB1-206ENST00000543881 Q6ZVQ6 151 aa5.75□□□□□ -1.49
GABPB1-206ENST00000543881 NREPQ16612 68 aa5.74□□□□□ -1.49
GABPB1-206ENST00000543881 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
GABPB1-206ENST00000543881 CYP4F30PQ9H0H9 118 aa5.73□□□□□ -1.49
GABPB1-206ENST00000543881 A0A1B0GW54 56 aa5.71□□□□□ -1.49
GABPB1-206ENST00000543881 WFDC13Q8IUB5 93 aa5.71□□□□□ -1.49
GABPB1-206ENST00000543881 OCR1Q9BZK8 76 aa5.71□□□□□ -1.5
GABPB1-206ENST00000543881 NEBP20929 6669 aa5.68□□□□□ -1.5
GABPB1-206ENST00000543881 BPY2O14599 106 aa5.68□□□□□ -1.5
GABPB1-206ENST00000543881 LCE3BQ5TA77 95 aa5.68□□□□□ -1.5
GABPB1-206ENST00000543881 MMP24-AS1A0A0U1RRL7 71 aa5.67□□□□□ -1.5
GABPB1-206ENST00000543881 TRAV22A0A0B4J277 110 aa5.66□□□□□ -1.5
GABPB1-206ENST00000543881 MRPL34Q9BQ48 92 aaKnown RBP5.64□□□□□ -1.51
GABPB1-206ENST00000543881 A6NN06 94 aa5.64□□□□□ -1.51
GABPB1-206ENST00000543881 LCA10Q71F78 164 aa5.64□□□□□ -1.51
GABPB1-206ENST00000543881 K7EQZ3 153 aa5.63□□□□□ -1.51
GABPB1-206ENST00000543881 C7orf65Q6ZTY9 151 aa5.63□□□□□ -1.51
GABPB1-206ENST00000543881 C1orf64Q8NEQ6 169 aa5.63□□□□□ -1.51
GABPB1-206ENST00000543881 Q5VV11 94 aa5.62□□□□□ -1.51
GABPB1-206ENST00000543881 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
GABPB1-206ENST00000543881 H1FX-AS1Q4G0G2 97 aa5.59□□□□□ -1.51
GABPB1-206ENST00000543881 LOC101927531A0A1B0GV80 90 aa5.58□□□□□ -1.52
GABPB1-206ENST00000543881 Q5W150 140 aa5.58□□□□□ -1.52
GABPB1-206ENST00000543881 KRTAP20-1Q3LI63 56 aa5.57□□□□□ -1.52
GABPB1-206ENST00000543881 SPANXA2-OT1Q8N9U9 137 aa5.57□□□□□ -1.52
GABPB1-206ENST00000543881 KRTAP9-9Q9BYP9 154 aa5.57□□□□□ -1.52
GABPB1-206ENST00000543881 KRTAP9-4Q9BYQ2 154 aa5.57□□□□□ -1.52
GABPB1-206ENST00000543881 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
GABPB1-206ENST00000543881 IGKV2D-30A0A075B6S6 120 aa5.55□□□□□ -1.52
GABPB1-206ENST00000543881 A8MUN3 132 aa5.55□□□□□ -1.52
GABPB1-206ENST00000543881 IGKV2-30P06310 120 aa5.55□□□□□ -1.52
GABPB1-206ENST00000543881 PSPHP1O15172 72 aa5.54□□□□□ -1.52
GABPB1-206ENST00000543881 Q8N9L7 120 aa5.54□□□□□ -1.52
GABPB1-206ENST00000543881 HCG22E2RYF7 251 aa5.53□□□□□ -1.52
GABPB1-206ENST00000543881 H3BPC8 53 aa5.51□□□□□ -1.53
GABPB1-206ENST00000543881 H3BS24 57 aa5.51□□□□□ -1.53
GABPB1-206ENST00000543881 CASC2Q6XLA1 102 aa5.51□□□□□ -1.53
GABPB1-206ENST00000543881 CHKB-CPT1BH3BT56 60 aa5.5□□□□□ -1.53
GABPB1-206ENST00000543881 LINC00208Q96KT6 92 aa5.45□□□□□ -1.54
GABPB1-206ENST00000543881 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
GABPB1-206ENST00000543881 A8MU10 97 aa5.44□□□□□ -1.54
GABPB1-206ENST00000543881 KRTAP3-1Q9BYR8 98 aa5.44□□□□□ -1.54
GABPB1-206ENST00000543881 LINC01554Q52M75 96 aa5.43□□□□□ -1.54
GABPB1-206ENST00000543881 SPTSSBQ8NFR3 76 aa5.43□□□□□ -1.54
GABPB1-206ENST00000543881 LINC01558Q9Y6Z2 57 aa5.43□□□□□ -1.54
GABPB1-206ENST00000543881 A6NED7 52 aa5.42□□□□□ -1.54
GABPB1-206ENST00000543881 PRR15LQ9BU68 103 aa5.42□□□□□ -1.54
GABPB1-206ENST00000543881 MDN1Q9NU22 5596 aa5.41□□□□□ -1.54
GABPB1-206ENST00000543881 MP68P56378 58 aa5.39□□□□□ -1.55
GABPB1-206ENST00000543881 KRTAP5-9P26371 169 aa5.39□□□□□ -1.55
GABPB1-206ENST00000543881 KMT2DO14686 5537 aa5.38□□□□□ -1.55
GABPB1-206ENST00000543881 MT1BP07438 61 aa5.36□□□□□ -1.55
GABPB1-206ENST00000543881 S4R3F8 94 aa5.36□□□□□ -1.55
GABPB1-206ENST00000543881 CSAG1Q6PB30 78 aa5.32□□□□□ -1.56
GABPB1-206ENST00000543881 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
GABPB1-206ENST00000543881 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
GABPB1-206ENST00000543881 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
GABPB1-206ENST00000543881 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
GABPB1-206ENST00000543881 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
GABPB1-206ENST00000543881 COA5Q86WW8 74 aa5.31□□□□□ -1.56
GABPB1-206ENST00000543881 KRTAP10-5P60370 271 aa5.3□□□□□ -1.56
GABPB1-206ENST00000543881 TP53AIP1Q9HCN2 124 aa5.29□□□□□ -1.56
GABPB1-206ENST00000543881 LCE4AQ5TA78 99 aa5.26□□□□□ -1.57
GABPB1-206ENST00000543881 H0Y9P7 68 aa5.25□□□□□ -1.57
GABPB1-206ENST00000543881 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
GABPB1-206ENST00000543881 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
GABPB1-206ENST00000543881 SPATA8Q6RVD6 105 aa5.19□□□□□ -1.58
GABPB1-206ENST00000543881 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
GABPB1-206ENST00000543881 SPRR2EP22531 72 aa5.16□□□□□ -1.58
GABPB1-206ENST00000543881 SPRR2BP35325 72 aa5.16□□□□□ -1.58
GABPB1-206ENST00000543881 SPRR2AP35326 72 aa5.16□□□□□ -1.58
GABPB1-206ENST00000543881 KRTAP4-9Q9BYQ8 210 aa5.15□□□□□ -1.58
GABPB1-206ENST00000543881 SPRR2FQ96RM1 72 aa5.14□□□□□ -1.59
GABPB1-206ENST00000543881 CRIPTQ9P021 101 aa5.14□□□□□ -1.59
GABPB1-206ENST00000543881 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
GABPB1-206ENST00000543881 KRTAP2-1Q9BYU5 128 aa5.13□□□□□ -1.59
GABPB1-206ENST00000543881 ADM2Q7Z4H4 148 aa5.1□□□□□ -1.59
GABPB1-206ENST00000543881 H0YAA0 97 aa5.09□□□□□ -1.59
GABPB1-206ENST00000543881 ROMO1P60602 79 aa5.06□□□□□ -1.6
GABPB1-206ENST00000543881 UQCR11O14957 56 aa5.04□□□□□ -1.6
GABPB1-206ENST00000543881 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
GABPB1-206ENST00000543881 ACYP2P14621 99 aa5.02□□□□□ -1.61
GABPB1-206ENST00000543881 KRTAP4-2Q9BYR5 136 aa5.02□□□□□ -1.61
GABPB1-206ENST00000543881 MIR22HGQ0VDD5 57 aa5.01□□□□□ -1.61
GABPB1-206ENST00000543881 SPRR2DP22532 72 aa5□□□□□ -1.61
GABPB1-206ENST00000543881 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
GABPB1-206ENST00000543881 MT1XP80297 61 aa4.99□□□□□ -1.61
GABPB1-206ENST00000543881 A0A1B0GU69 56 aa4.98□□□□□ -1.61
GABPB1-206ENST00000543881 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
GABPB1-206ENST00000543881 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
GABPB1-206ENST00000543881 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms