RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 C5orf47Q569G3 176 aa5.61□□□□□ -1.51
YBX3-207ENST00000539204 WFDC13Q8IUB5 93 aa5.61□□□□□ -1.51
YBX3-207ENST00000539204 C20orf197Q8N268 126 aa5.61□□□□□ -1.51
YBX3-207ENST00000539204 C8orf87E5RJ46 101 aa5.6□□□□□ -1.51
YBX3-207ENST00000539204 NDUFC1O43677 76 aa5.59□□□□□ -1.51
YBX3-207ENST00000539204 TMEM254Q8TBM7 123 aa5.59□□□□□ -1.51
YBX3-207ENST00000539204 IGHV6-1A0A0B4J1U7 121 aa5.58□□□□□ -1.52
YBX3-207ENST00000539204 SPINK7P58062 85 aa5.58□□□□□ -1.52
YBX3-207ENST00000539204 TP53AIP1Q9HCN2 124 aa5.58□□□□□ -1.52
YBX3-207ENST00000539204 H3BPC8 53 aa5.56□□□□□ -1.52
YBX3-207ENST00000539204 TMEM258P61165 79 aa5.56□□□□□ -1.52
YBX3-207ENST00000539204 MRPL34Q9BQ48 92 aaKnown RBP5.56□□□□□ -1.52
YBX3-207ENST00000539204 CYSTM1Q9H1C7 97 aa5.56□□□□□ -1.52
YBX3-207ENST00000539204 KRTAP2-2Q9BYT5 123 aa5.55□□□□□ -1.52
YBX3-207ENST00000539204 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
YBX3-207ENST00000539204 H7BZZ5 65 aa5.54□□□□□ -1.52
YBX3-207ENST00000539204 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
YBX3-207ENST00000539204 SNURFQ9Y675 71 aa5.53□□□□□ -1.52
YBX3-207ENST00000539204 MP68P56378 58 aa5.52□□□□□ -1.53
YBX3-207ENST00000539204 TRAV22A0A0B4J277 110 aa5.5□□□□□ -1.53
YBX3-207ENST00000539204 KRTAP10-5P60370 271 aa5.5□□□□□ -1.53
YBX3-207ENST00000539204 H0Y9P7 68 aa5.49□□□□□ -1.53
YBX3-207ENST00000539204 MT1BP07438 61 aa5.49□□□□□ -1.53
YBX3-207ENST00000539204 Q5VV11 94 aa5.49□□□□□ -1.53
YBX3-207ENST00000539204 ATP5EP56381 51 aaPredicted RBP5.48□□□□□ -1.53
YBX3-207ENST00000539204 SPRR2EP22531 72 aa5.47□□□□□ -1.53
YBX3-207ENST00000539204 SPRR2BP35325 72 aa5.47□□□□□ -1.53
YBX3-207ENST00000539204 SPRR2AP35326 72 aa5.47□□□□□ -1.53
YBX3-207ENST00000539204 RPS28P62857 69 aaKnown RBP5.47□□□□□ -1.53
YBX3-207ENST00000539204 LINC00208Q96KT6 92 aa5.47□□□□□ -1.53
YBX3-207ENST00000539204 NDUFS5O43920 106 aa5.46□□□□□ -1.54
YBX3-207ENST00000539204 C1orf64Q8NEQ6 169 aa5.45□□□□□ -1.54
YBX3-207ENST00000539204 H1FX-AS1Q4G0G2 97 aa5.44□□□□□ -1.54
YBX3-207ENST00000539204 Q5W150 140 aa5.42□□□□□ -1.54
YBX3-207ENST00000539204 SPANXA2-OT1Q8N9U9 137 aa5.42□□□□□ -1.54
YBX3-207ENST00000539204 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
YBX3-207ENST00000539204 LOC101927531A0A1B0GV80 90 aa5.4□□□□□ -1.54
YBX3-207ENST00000539204 KRTAP19-8Q3LI54 63 aa5.4□□□□□ -1.54
YBX3-207ENST00000539204 SERP1Q9Y6X1 66 aa5.4□□□□□ -1.54
YBX3-207ENST00000539204 GPR98Q8WXG9 6306 aa5.4□□□□□ -1.55
YBX3-207ENST00000539204 CYP4F30PQ9H0H9 118 aa5.39□□□□□ -1.55
YBX3-207ENST00000539204 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
YBX3-207ENST00000539204 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
YBX3-207ENST00000539204 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
YBX3-207ENST00000539204 SPRR2DP22532 72 aa5.3□□□□□ -1.56
YBX3-207ENST00000539204 SMIM26A0A096LP01 95 aa5.27□□□□□ -1.57
YBX3-207ENST00000539204 C7orf65Q6ZTY9 151 aa5.25□□□□□ -1.57
YBX3-207ENST00000539204 KRTAP8-1Q8IUC2 63 aa5.23□□□□□ -1.57
YBX3-207ENST00000539204 IGKV2D-30A0A075B6S6 120 aa5.22□□□□□ -1.57
YBX3-207ENST00000539204 DMAC1Q96GE9 116 aa5.22□□□□□ -1.57
YBX3-207ENST00000539204 ACYP2P14621 99 aa5.21□□□□□ -1.58
YBX3-207ENST00000539204 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
YBX3-207ENST00000539204 COA5Q86WW8 74 aa5.19□□□□□ -1.58
YBX3-207ENST00000539204 A8MUN3 132 aa5.16□□□□□ -1.58
YBX3-207ENST00000539204 Q1T7F1 81 aa5.16□□□□□ -1.58
YBX3-207ENST00000539204 CSAG1Q6PB30 78 aa5.16□□□□□ -1.58
YBX3-207ENST00000539204 V9GYY9 64 aa5.14□□□□□ -1.59
YBX3-207ENST00000539204 C4orf26Q17RF5 130 aa5.12□□□□□ -1.59
YBX3-207ENST00000539204 PRO2289Q9P1D8 64 aa5.11□□□□□ -1.59
YBX3-207ENST00000539204 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
YBX3-207ENST00000539204 S4R3F8 94 aa5.09□□□□□ -1.59
YBX3-207ENST00000539204 CRIPTQ9P021 101 aa5.08□□□□□ -1.6
YBX3-207ENST00000539204 KRTAP3-1Q9BYR8 98 aa5.07□□□□□ -1.6
YBX3-207ENST00000539204 LINC01558Q9Y6Z2 57 aa5.07□□□□□ -1.6
YBX3-207ENST00000539204 CHKB-CPT1BH3BT56 60 aa5.06□□□□□ -1.6
YBX3-207ENST00000539204 LCA10Q71F78 164 aa5.04□□□□□ -1.6
YBX3-207ENST00000539204 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
YBX3-207ENST00000539204 SPTSSBQ8NFR3 76 aa5.02□□□□□ -1.61
YBX3-207ENST00000539204 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
YBX3-207ENST00000539204 MT1XP80297 61 aa5.01□□□□□ -1.61
YBX3-207ENST00000539204 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
YBX3-207ENST00000539204 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
YBX3-207ENST00000539204 PSPHP1O15172 72 aa4.97□□□□□ -1.61
YBX3-207ENST00000539204 PRR15LQ9BU68 103 aa4.96□□□□□ -1.62
YBX3-207ENST00000539204 PLAC4Q8WY50 150 aa4.93□□□□□ -1.62
YBX3-207ENST00000539204 A0A1B0GU69 56 aa4.91□□□□□ -1.62
YBX3-207ENST00000539204 SEC61GP60059 68 aa4.87□□□□□ -1.63
YBX3-207ENST00000539204 PRO0628Q9UI54 55 aa4.85□□□□□ -1.63
YBX3-207ENST00000539204 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
YBX3-207ENST00000539204 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
YBX3-207ENST00000539204 A6NED7 52 aa4.83□□□□□ -1.64
YBX3-207ENST00000539204 CDC42SE1Q9NRR8 79 aa4.82□□□□□ -1.64
YBX3-207ENST00000539204 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
YBX3-207ENST00000539204 UQCR11O14957 56 aa4.8□□□□□ -1.64
YBX3-207ENST00000539204 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
YBX3-207ENST00000539204 SPATA8Q6RVD6 105 aa4.79□□□□□ -1.64
YBX3-207ENST00000539204 H0YAA0 97 aa4.78□□□□□ -1.64
YBX3-207ENST00000539204 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
YBX3-207ENST00000539204 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
YBX3-207ENST00000539204 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
YBX3-207ENST00000539204 A0A1B0GU33 70 aa4.75□□□□□ -1.65
YBX3-207ENST00000539204 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
YBX3-207ENST00000539204 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
YBX3-207ENST00000539204 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
YBX3-207ENST00000539204 A8MU10 97 aa4.72□□□□□ -1.65
YBX3-207ENST00000539204 MT4P47944 62 aa4.69□□□□□ -1.66
YBX3-207ENST00000539204 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
YBX3-207ENST00000539204 R4GN34 69 aa4.67□□□□□ -1.66
YBX3-207ENST00000539204 P0C880 135 aa4.66□□□□□ -1.66
YBX3-207ENST00000539204 LCE4AQ5TA78 99 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 1376.1 ms