RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 LINC00575Q6W349 94 aa2.99□□□□□ -1.93
PABPC1-223ENST00000523636 ST20-AS1Q8NBB2 130 aa2.99□□□□□ -1.93
PABPC1-223ENST00000523636 UBL5Q9BZL1 73 aa2.99□□□□□ -1.93
PABPC1-223ENST00000523636 KLK12Q9UKR0 248 aa2.99□□□□□ -1.93
PABPC1-223ENST00000523636 NCR3O14931 201 aa2.98□□□□□ -1.93
PABPC1-223ENST00000523636 KRTAP10-12P60413 245 aa2.98□□□□□ -1.93
PABPC1-223ENST00000523636 KRTAP25-1Q3LHN0 102 aa2.98□□□□□ -1.93
PABPC1-223ENST00000523636 UNQ6190/PRO20217Q6UXQ8 127 aa2.98□□□□□ -1.93
PABPC1-223ENST00000523636 TMEM254Q8TBM7 123 aa2.98□□□□□ -1.93
PABPC1-223ENST00000523636 C22orf24Q9Y442 160 aa2.98□□□□□ -1.93
PABPC1-223ENST00000523636 LOC110117498A0A087WWA1 95 aa2.97□□□□□ -1.93
PABPC1-223ENST00000523636 CHKB-CPT1BH3BT56 60 aa2.97□□□□□ -1.93
PABPC1-223ENST00000523636 PSCAO43653 123 aa2.97□□□□□ -1.93
PABPC1-223ENST00000523636 ZNF861PO60384 105 aa2.97□□□□□ -1.93
PABPC1-223ENST00000523636 IGLV6-57P01721 117 aa2.97□□□□□ -1.93
PABPC1-223ENST00000523636 ENHOQ6UWT2 76 aa2.97□□□□□ -1.93
PABPC1-223ENST00000523636 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.97□□□□□ -1.93
PABPC1-223ENST00000523636 TRAV23DV6A0A075B6W5 121 aa2.96□□□□□ -1.94
PABPC1-223ENST00000523636 IGKV3D-7A0A0C4DH55 119 aa2.96□□□□□ -1.94
PABPC1-223ENST00000523636 A8MU10 97 aa2.96□□□□□ -1.94
PABPC1-223ENST00000523636 COX7BP24311 80 aa2.96□□□□□ -1.94
PABPC1-223ENST00000523636 LINC00846Q9NV44 126 aa2.96□□□□□ -1.94
PABPC1-223ENST00000523636 A0A087WVE0 104 aa2.95□□□□□ -1.94
PABPC1-223ENST00000523636 C6orf48Q9UBA6 75 aa2.95□□□□□ -1.94
PABPC1-223ENST00000523636 NDUFB1O75438 58 aa2.94□□□□□ -1.94
PABPC1-223ENST00000523636 LINC00483Q53H64 154 aa2.94□□□□□ -1.94
PABPC1-223ENST00000523636 LINC01556Q5JQF7 62 aa2.94□□□□□ -1.94
PABPC1-223ENST00000523636 KRTAP26-1Q6PEX3 210 aa2.94□□□□□ -1.94
PABPC1-223ENST00000523636 WFDC10BQ8IUB3 73 aa2.94□□□□□ -1.94
PABPC1-223ENST00000523636 C9orf163Q8N9P6 203 aa2.94□□□□□ -1.94
PABPC1-223ENST00000523636 IGKV2D-24A0A075B6R9 120 aa2.93□□□□□ -1.94
PABPC1-223ENST00000523636 Q6ZQY7 126 aa2.93□□□□□ -1.94
PABPC1-223ENST00000523636 Q9BRP9 147 aa2.93□□□□□ -1.94
PABPC1-223ENST00000523636 SNURFQ9Y675 71 aa2.93□□□□□ -1.94
PABPC1-223ENST00000523636 A0A1W2PNM2 257 aa2.91□□□□□ -1.94
PABPC1-223ENST00000523636 CSAG1Q6PB30 78 aa2.91□□□□□ -1.94
PABPC1-223ENST00000523636 KCNQ1DNQ9H478 68 aa2.91□□□□□ -1.94
PABPC1-223ENST00000523636 NREPQ16612 68 aa2.9□□□□□ -1.95
PABPC1-223ENST00000523636 ETDCA0A1B0GVM5 59 aa2.89□□□□□ -1.95
PABPC1-223ENST00000523636 CNBPP62633 177 aaKnown RBP2.89□□□□□ -1.95
PABPC1-223ENST00000523636 KRTAP10-5P60370 271 aa2.88□□□□□ -1.95
PABPC1-223ENST00000523636 IGLV5-48A0A075B6I7 105 aa2.87□□□□□ -1.95
PABPC1-223ENST00000523636 DEFB105AQ8NG35 78 aa2.87□□□□□ -1.95
PABPC1-223ENST00000523636 ZCCHC13Q8WW36 166 aaKnown RBP2.87□□□□□ -1.95
PABPC1-223ENST00000523636 PLAC8Q9NZF1 115 aa2.87□□□□□ -1.95
PABPC1-223ENST00000523636 LINC01558Q9Y6Z2 57 aa2.87□□□□□ -1.95
PABPC1-223ENST00000523636 R4GN34 69 aa2.87□□□□□ -1.95
PABPC1-223ENST00000523636 KRTAP2-3P0C7H8 128 aa2.86□□□□□ -1.95
PABPC1-223ENST00000523636 C1orf137Q5JT78 98 aa2.86□□□□□ -1.95
PABPC1-223ENST00000523636 SPINK6Q6UWN8 80 aa2.86□□□□□ -1.95
PABPC1-223ENST00000523636 Q6ZRX8 168 aa2.86□□□□□ -1.95
PABPC1-223ENST00000523636 HIGD2AQ9BW72 106 aa2.86□□□□□ -1.95
PABPC1-223ENST00000523636 KRTAP2-4Q9BYR9 128 aa2.86□□□□□ -1.95
PABPC1-223ENST00000523636 SPRR1AP35321 89 aa2.85□□□□□ -1.95
PABPC1-223ENST00000523636 DMAC1Q96GE9 116 aa2.85□□□□□ -1.95
PABPC1-223ENST00000523636 PRR15LQ9BU68 103 aa2.85□□□□□ -1.95
PABPC1-223ENST00000523636 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
PABPC1-223ENST00000523636 KRTAP1-4P0C5Y4 121 aa2.83□□□□□ -1.96
PABPC1-223ENST00000523636 SPINT4Q6UDR6 99 aa2.83□□□□□ -1.96
PABPC1-223ENST00000523636 PRO2289Q9P1D8 64 aa2.83□□□□□ -1.96
PABPC1-223ENST00000523636 LINC00208Q96KT6 92 aa2.82□□□□□ -1.96
PABPC1-223ENST00000523636 SPRR4Q96PI1 79 aa2.82□□□□□ -1.96
PABPC1-223ENST00000523636 PSORS1C2Q9UIG4 136 aa2.82□□□□□ -1.96
PABPC1-223ENST00000523636 IGKV4-1P06312 121 aa2.8□□□□□ -1.96
PABPC1-223ENST00000523636 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
PABPC1-223ENST00000523636 SPAG11AQ6PDA7 123 aa2.8□□□□□ -1.96
PABPC1-223ENST00000523636 TPRXLQ17RH7 258 aa2.79□□□□□ -1.96
PABPC1-223ENST00000523636 IGKV2-24A0A0C4DH68 120 aa2.78□□□□□ -1.96
PABPC1-223ENST00000523636 SPRR1BP22528 89 aa2.78□□□□□ -1.96
PABPC1-223ENST00000523636 SPACA4Q8TDM5 124 aa2.78□□□□□ -1.96
PABPC1-223ENST00000523636 A0A096LNI7 61 aa2.77□□□□□ -1.97
PABPC1-223ENST00000523636 A0A1W2PNN7 141 aa2.77□□□□□ -1.97
PABPC1-223ENST00000523636 SPATA8Q6RVD6 105 aa2.77□□□□□ -1.97
PABPC1-223ENST00000523636 IGFL1Q6UW32 110 aa2.77□□□□□ -1.97
PABPC1-223ENST00000523636 HRES1P13985 223 aa2.76□□□□□ -1.97
PABPC1-223ENST00000523636 Q8N9L7 120 aa2.76□□□□□ -1.97
PABPC1-223ENST00000523636 H0Y9P7 68 aa2.75□□□□□ -1.97
PABPC1-223ENST00000523636 PRLHP81277 87 aa2.75□□□□□ -1.97
PABPC1-223ENST00000523636 UQCR11O14957 56 aa2.74□□□□□ -1.97
PABPC1-223ENST00000523636 A0A0G2JQZ4 141 aa2.73□□□□□ -1.97
PABPC1-223ENST00000523636 K7EQZ3 153 aa2.73□□□□□ -1.97
PABPC1-223ENST00000523636 M0R2T5 61 aa2.73□□□□□ -1.97
PABPC1-223ENST00000523636 KRTAP2-1Q9BYU5 128 aa2.73□□□□□ -1.97
PABPC1-223ENST00000523636 TP53AIP1Q9HCN2 124 aa2.73□□□□□ -1.97
PABPC1-223ENST00000523636 LINC00472Q9H8W2 130 aa2.72□□□□□ -1.97
PABPC1-223ENST00000523636 SPINK7P58062 85 aa2.71□□□□□ -1.98
PABPC1-223ENST00000523636 WFDC13Q8IUB5 93 aa2.71□□□□□ -1.98
PABPC1-223ENST00000523636 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
PABPC1-223ENST00000523636 KRTAP13-1Q8IUC0 172 aa2.7□□□□□ -1.98
PABPC1-223ENST00000523636 ANAPC11Q9NYG5 84 aa2.7□□□□□ -1.98
PABPC1-223ENST00000523636 COA5Q86WW8 74 aa2.69□□□□□ -1.98
PABPC1-223ENST00000523636 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
PABPC1-223ENST00000523636 SSBP3-AS1Q7Z2R9 100 aa2.68□□□□□ -1.98
PABPC1-223ENST00000523636 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
PABPC1-223ENST00000523636 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
PABPC1-223ENST00000523636 KRTAP11-1Q8IUC1 163 aa2.67□□□□□ -1.98
PABPC1-223ENST00000523636 KRTAP13-3Q3SY46 172 aa2.66□□□□□ -1.98
PABPC1-223ENST00000523636 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
PABPC1-223ENST00000523636 MMP24-AS1A0A0U1RRL7 71 aa2.65□□□□□ -1.99
PABPC1-223ENST00000523636 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms