RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 SIX6O95475 246 aa-0.2□□□□□ -2.44
SKP1-205ENST00000519054 ANP32BQ92688 251 aaKnown RBP-0.2□□□□□ -2.44
SKP1-205ENST00000519054 C7orf77A4D0Y5 90 aa-0.21□□□□□ -2.44
SKP1-205ENST00000519054 I3L3M4 83 aa-0.21□□□□□ -2.44
SKP1-205ENST00000519054 C3orf79P0CE67 100 aa-0.21□□□□□ -2.44
SKP1-205ENST00000519054 FAM213BQ8TBF2 198 aa-0.21□□□□□ -2.44
SKP1-205ENST00000519054 FAM167A-AS1Q96KT0 104 aa-0.21□□□□□ -2.44
SKP1-205ENST00000519054 MGST2Q99735 147 aa-0.21□□□□□ -2.44
SKP1-205ENST00000519054 J3QR89 54 aa-0.22□□□□□ -2.44
SKP1-205ENST00000519054 K7ERU9 68 aa-0.22□□□□□ -2.44
SKP1-205ENST00000519054 GCHFRP30047 84 aa-0.22□□□□□ -2.44
SKP1-205ENST00000519054 GNG2P59768 71 aa-0.22□□□□□ -2.44
SKP1-205ENST00000519054 RPL39P62891 51 aaKnown RBP-0.22□□□□□ -2.44
SKP1-205ENST00000519054 ACBD7Q8N6N7 88 aa-0.22□□□□□ -2.44
SKP1-205ENST00000519054 SMIM2Q9BVW6 85 aa-0.22□□□□□ -2.44
SKP1-205ENST00000519054 FAM107BQ9H098 131 aa-0.22□□□□□ -2.44
SKP1-205ENST00000519054 AP4S1Q9Y587 144 aa-0.22□□□□□ -2.44
SKP1-205ENST00000519054 A0A087WXM4 84 aa-0.23□□□□□ -2.45
SKP1-205ENST00000519054 TRAV1-2A0A0B4J238 106 aa-0.23□□□□□ -2.45
SKP1-205ENST00000519054 ZNF815PA8K554 130 aa-0.23□□□□□ -2.45
SKP1-205ENST00000519054 SSSCA1O60232 199 aa-0.24□□□□□ -2.45
SKP1-205ENST00000519054 UBE2L3P68036 154 aaKnown RBP-0.24□□□□□ -2.45
SKP1-205ENST00000519054 S100A7L2Q5SY68 101 aa-0.24□□□□□ -2.45
SKP1-205ENST00000519054 SPTSSBQ8NFR3 76 aa-0.24□□□□□ -2.45
SKP1-205ENST00000519054 CNFNQ9BYD5 112 aa-0.24□□□□□ -2.45
SKP1-205ENST00000519054 CYP4F30PQ9H0H9 118 aa-0.24□□□□□ -2.45
SKP1-205ENST00000519054 NXT2Q9NPJ8 142 aaKnown RBP-0.24□□□□□ -2.45
SKP1-205ENST00000519054 CDKN2A-AS1Q9UH64 79 aa-0.24□□□□□ -2.45
SKP1-205ENST00000519054 SCP2D1Q9UJQ7 156 aa-0.24□□□□□ -2.45
SKP1-205ENST00000519054 NDUFB6O95139 128 aa-0.25□□□□□ -2.45
SKP1-205ENST00000519054 S100A12P80511 92 aa-0.25□□□□□ -2.45
SKP1-205ENST00000519054 C12orf73Q69YU5 71 aa-0.25□□□□□ -2.45
SKP1-205ENST00000519054 RPL7L1Q6DKI1 246 aaKnown RBP-0.25□□□□□ -2.45
SKP1-205ENST00000519054 PFDN5Q99471 154 aa-0.25□□□□□ -2.45
SKP1-205ENST00000519054 TMEM191AQ9H0A3 160 aa-0.25□□□□□ -2.45
SKP1-205ENST00000519054 HCG22E2RYF7 251 aa-0.26□□□□□ -2.45
SKP1-205ENST00000519054 NDUFC1O43677 76 aa-0.26□□□□□ -2.45
SKP1-205ENST00000519054 FCER1GP30273 86 aa-0.26□□□□□ -2.45
SKP1-205ENST00000519054 POLR2KP53803 58 aaKnown RBP-0.26□□□□□ -2.45
SKP1-205ENST00000519054 SMCO1Q147U7 214 aa-0.26□□□□□ -2.45
SKP1-205ENST00000519054 CCDC58Q4VC31 144 aa-0.26□□□□□ -2.45
SKP1-205ENST00000519054 H3BUT2 72 aa-0.27□□□□□ -2.45
SKP1-205ENST00000519054 PDCD5O14737 125 aa-0.27□□□□□ -2.45
SKP1-205ENST00000519054 SPINK8P0C7L1 97 aa-0.27□□□□□ -2.45
SKP1-205ENST00000519054 LINC00158P58513 81 aa-0.27□□□□□ -2.45
SKP1-205ENST00000519054 KCNRGQ8N5I3 272 aa-0.27□□□□□ -2.45
SKP1-205ENST00000519054 ST20Q9HBF5 79 aa-0.27□□□□□ -2.45
SKP1-205ENST00000519054 SNCGO76070 127 aa-0.28□□□□□ -2.45
SKP1-205ENST00000519054 TNP1P09430 55 aa-0.28□□□□□ -2.45
SKP1-205ENST00000519054 Q6JHZ5 121 aa-0.28□□□□□ -2.45
SKP1-205ENST00000519054 BAGE3Q86Y29 109 aa-0.28□□□□□ -2.45
SKP1-205ENST00000519054 PSENENQ9NZ42 101 aa-0.28□□□□□ -2.45
SKP1-205ENST00000519054 SEC11CQ9BY50 192 aa-0.29□□□□□ -2.46
SKP1-205ENST00000519054 CACFD1Q9UGQ2 172 aa-0.29□□□□□ -2.46
SKP1-205ENST00000519054 UBE2L5PA0A1B0GUS4 154 aa-0.3□□□□□ -2.46
SKP1-205ENST00000519054 PPP1R17O96001 155 aa-0.3□□□□□ -2.46
SKP1-205ENST00000519054 SMIM13P0DJ93 91 aa-0.3□□□□□ -2.46
SKP1-205ENST00000519054 IFITM1P13164 125 aa-0.3□□□□□ -2.46
SKP1-205ENST00000519054 COX7BP24311 80 aa-0.3□□□□□ -2.46
SKP1-205ENST00000519054 COX17Q14061 63 aa-0.3□□□□□ -2.46
SKP1-205ENST00000519054 MUSTN1Q8IVN3 82 aa-0.3□□□□□ -2.46
SKP1-205ENST00000519054 Q8N8P6 123 aa-0.3□□□□□ -2.46
SKP1-205ENST00000519054 TRAV13-2A0A0B4J235 113 aa-0.31□□□□□ -2.46
SKP1-205ENST00000519054 GNGT2O14610 69 aa-0.31□□□□□ -2.46
SKP1-205ENST00000519054 C2orf88Q9BSF0 95 aa-0.31□□□□□ -2.46
SKP1-205ENST00000519054 IFI27P40305 119 aaPredicted RBP-0.32□□□□□ -2.46
SKP1-205ENST00000519054 PRM1P04553 51 aa-0.33□□□□□ -2.46
SKP1-205ENST00000519054 SERP1Q9Y6X1 66 aa-0.34□□□□□ -2.46
SKP1-205ENST00000519054 SFT2D2O95562 160 aa-0.35□□□□□ -2.47
SKP1-205ENST00000519054 SMIM6P0DI80 62 aa-0.35□□□□□ -2.47
SKP1-205ENST00000519054 TRAV22A0A0B4J277 110 aa-0.36□□□□□ -2.47
SKP1-205ENST00000519054 MMP24-AS1A0A0U1RRL7 71 aa-0.36□□□□□ -2.47
SKP1-205ENST00000519054 SEC11AP67812 179 aa-0.36□□□□□ -2.47
SKP1-205ENST00000519054 MEIG1Q5JSS6 88 aa-0.36□□□□□ -2.47
SKP1-205ENST00000519054 C9orf62Q8N4C0 152 aa-0.36□□□□□ -2.47
SKP1-205ENST00000519054 MRPL34Q9BQ48 92 aaKnown RBP-0.36□□□□□ -2.47
SKP1-205ENST00000519054 TRBV7-4A0A0J9YYF1 115 aa-0.37□□□□□ -2.47
SKP1-205ENST00000519054 CTXND1A0A1B0GTU2 59 aa-0.37□□□□□ -2.47
SKP1-205ENST00000519054 EFCAB10A6NFE3 127 aa-0.37□□□□□ -2.47
SKP1-205ENST00000519054 BAGE2Q86Y30 109 aa-0.37□□□□□ -2.47
SKP1-205ENST00000519054 SNHG12Q9BXW3 62 aa-0.37□□□□□ -2.47
SKP1-205ENST00000519054 TP53AIP1Q9HCN2 124 aa-0.37□□□□□ -2.47
SKP1-205ENST00000519054 SPCS1Q9Y6A9 102 aa-0.37□□□□□ -2.47
SKP1-205ENST00000519054 IGIPA6NJ69 53 aa-0.38□□□□□ -2.47
SKP1-205ENST00000519054 MRPS10P82664 201 aaKnown RBP-0.38□□□□□ -2.47
SKP1-205ENST00000519054 SMIM4Q8WVI0 70 aa-0.38□□□□□ -2.47
SKP1-205ENST00000519054 V9GYH0 126 aa-0.38□□□□□ -2.47
SKP1-205ENST00000519054 NDUFB1O75438 58 aa-0.39□□□□□ -2.47
SKP1-205ENST00000519054 COPS9Q8WXC6 57 aa-0.39□□□□□ -2.47
SKP1-205ENST00000519054 SPANXDQ9BXN6 97 aa-0.39□□□□□ -2.47
SKP1-205ENST00000519054 C20orf78Q9BR46 151 aa-0.4□□□□□ -2.47
SKP1-205ENST00000519054 LINC01558Q9Y6Z2 57 aa-0.4□□□□□ -2.47
SKP1-205ENST00000519054 PIGBOS1A0A0B4J2F0 54 aa-0.41□□□□□ -2.48
SKP1-205ENST00000519054 hADV29S1A0JD25 119 aa-0.41□□□□□ -2.48
SKP1-205ENST00000519054 UQCR11O14957 56 aa-0.41□□□□□ -2.48
SKP1-205ENST00000519054 GNG11P61952 73 aa-0.41□□□□□ -2.48
SKP1-205ENST00000519054 TMEM170BQ5T4T1 132 aa-0.41□□□□□ -2.48
SKP1-205ENST00000519054 S100A16Q96FQ6 103 aaKnown RBP-0.41□□□□□ -2.48
SKP1-205ENST00000519054 TMEM167BQ9NRX6 74 aa-0.41□□□□□ -2.48
SKP1-205ENST00000519054 FAM25AB3EWG3 89 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms