RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 GTF2H5Q6ZYL4 71 aa1.76□□□□□ -2.13
UBE2D3-226ENST00000508635 PRR15Q8IV56 129 aa1.76□□□□□ -2.13
UBE2D3-226ENST00000508635 IGHV6-1A0A0B4J1U7 121 aa1.75□□□□□ -2.13
UBE2D3-226ENST00000508635 NDUFB1O75438 58 aa1.75□□□□□ -2.13
UBE2D3-226ENST00000508635 SIGMAR1Q99720 223 aa1.75□□□□□ -2.13
UBE2D3-226ENST00000508635 C8orf17Q9NRJ1 99 aa1.74□□□□□ -2.13
UBE2D3-226ENST00000508635 LINC00846Q9NV44 126 aa1.74□□□□□ -2.13
UBE2D3-226ENST00000508635 ETDBQ3ZM63 59 aa1.73□□□□□ -2.13
UBE2D3-226ENST00000508635 MMP24-AS1A0A0U1RRL7 71 aa1.72□□□□□ -2.13
UBE2D3-226ENST00000508635 BPY2O14599 106 aa1.72□□□□□ -2.13
UBE2D3-226ENST00000508635 HRES1P13985 223 aa1.72□□□□□ -2.13
UBE2D3-226ENST00000508635 SEC61GP60059 68 aa1.72□□□□□ -2.13
UBE2D3-226ENST00000508635 ZCCHC13Q8WW36 166 aaKnown RBP1.72□□□□□ -2.13
UBE2D3-226ENST00000508635 SPRR5A0A1B0GTR4 108 aa1.71□□□□□ -2.14
UBE2D3-226ENST00000508635 hDV103S1A0JD37 113 aa1.71□□□□□ -2.14
UBE2D3-226ENST00000508635 K7EQZ3 153 aa1.71□□□□□ -2.14
UBE2D3-226ENST00000508635 ACYP1P07311 99 aa1.71□□□□□ -2.14
UBE2D3-226ENST00000508635 KRTAP10-10P60014 251 aa1.71□□□□□ -2.14
UBE2D3-226ENST00000508635 TMEM254Q8TBM7 123 aa1.71□□□□□ -2.14
UBE2D3-226ENST00000508635 MRPL34Q9BQ48 92 aaKnown RBP1.71□□□□□ -2.14
UBE2D3-226ENST00000508635 UBL5Q9BZL1 73 aa1.71□□□□□ -2.14
UBE2D3-226ENST00000508635 RBM12B-AS1Q9P1G2 102 aa1.71□□□□□ -2.14
UBE2D3-226ENST00000508635 USH2AO75445 5202 aa1.71□□□□□ -2.14
UBE2D3-226ENST00000508635 SSPOA2VEC9 5147 aa1.71□□□□□ -2.14
UBE2D3-226ENST00000508635 A0A1B0GV90 55 aa1.7□□□□□ -2.14
UBE2D3-226ENST00000508635 FAM240AA0A1B0GVK7 77 aa1.7□□□□□ -2.14
UBE2D3-226ENST00000508635 MT2AP02795 61 aa1.7□□□□□ -2.14
UBE2D3-226ENST00000508635 SPINK7P58062 85 aa1.7□□□□□ -2.14
UBE2D3-226ENST00000508635 C5orf47Q569G3 176 aa1.7□□□□□ -2.14
UBE2D3-226ENST00000508635 Q5W150 140 aa1.7□□□□□ -2.14
UBE2D3-226ENST00000508635 FAM236DA0A1B0GTK5 79 aa1.69□□□□□ -2.14
UBE2D3-226ENST00000508635 MT1FP04733 61 aa1.69□□□□□ -2.14
UBE2D3-226ENST00000508635 FAM236CP0DP71 79 aa1.69□□□□□ -2.14
UBE2D3-226ENST00000508635 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
UBE2D3-226ENST00000508635 CASC2Q6XLA1 102 aa1.68□□□□□ -2.14
UBE2D3-226ENST00000508635 WFDC13Q8IUB5 93 aa1.68□□□□□ -2.14
UBE2D3-226ENST00000508635 HCG22E2RYF7 251 aa1.67□□□□□ -2.14
UBE2D3-226ENST00000508635 LINC00643Q86TS7 51 aa1.67□□□□□ -2.14
UBE2D3-226ENST00000508635 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
UBE2D3-226ENST00000508635 NDUFS5O43920 106 aa1.66□□□□□ -2.14
UBE2D3-226ENST00000508635 ATP5EP2Q5VTU8 51 aa1.66□□□□□ -2.14
UBE2D3-226ENST00000508635 TP53AIP1Q9HCN2 124 aa1.66□□□□□ -2.14
UBE2D3-226ENST00000508635 SCGB1A1P11684 91 aa1.65□□□□□ -2.15
UBE2D3-226ENST00000508635 MACF1Q9UPN3 7388 aaKnown RBP1.64□□□□□ -2.15
UBE2D3-226ENST00000508635 H1FX-AS1Q4G0G2 97 aa1.64□□□□□ -2.15
UBE2D3-226ENST00000508635 C7orf65Q6ZTY9 151 aa1.64□□□□□ -2.15
UBE2D3-226ENST00000508635 CYP4F30PQ9H0H9 118 aa1.64□□□□□ -2.15
UBE2D3-226ENST00000508635 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
UBE2D3-226ENST00000508635 J3QR89 54 aa1.63□□□□□ -2.15
UBE2D3-226ENST00000508635 UQCRQO14949 82 aa1.63□□□□□ -2.15
UBE2D3-226ENST00000508635 V9GYY9 64 aa1.63□□□□□ -2.15
UBE2D3-226ENST00000508635 SYNE2Q8WXH0 6885 aaKnown RBP1.62□□□□□ -2.15
UBE2D3-226ENST00000508635 HIST1H4AP62805 103 aaKnown RBP1.62□□□□□ -2.15
UBE2D3-226ENST00000508635 C4orf26Q17RF5 130 aa1.62□□□□□ -2.15
UBE2D3-226ENST00000508635 KRTAP19-6Q3LI70 58 aa1.62□□□□□ -2.15
UBE2D3-226ENST00000508635 A0A087WVE0 104 aa1.61□□□□□ -2.15
UBE2D3-226ENST00000508635 C1orf64Q8NEQ6 169 aa1.61□□□□□ -2.15
UBE2D3-226ENST00000508635 IMUPQ9GZP8 106 aa1.61□□□□□ -2.15
UBE2D3-226ENST00000508635 TRAV22A0A0B4J277 110 aa1.6□□□□□ -2.15
UBE2D3-226ENST00000508635 LOC101927531A0A1B0GV80 90 aa1.6□□□□□ -2.15
UBE2D3-226ENST00000508635 ATOX1O00244 68 aa1.6□□□□□ -2.15
UBE2D3-226ENST00000508635 K7ERU9 68 aa1.59□□□□□ -2.15
UBE2D3-226ENST00000508635 H0Y9P7 68 aa1.58□□□□□ -2.16
UBE2D3-226ENST00000508635 H3BPC8 53 aa1.58□□□□□ -2.16
UBE2D3-226ENST00000508635 MT-ATP8P03928 68 aa1.58□□□□□ -2.16
UBE2D3-226ENST00000508635 KLKP1Q107X0 134 aa1.58□□□□□ -2.16
UBE2D3-226ENST00000508635 CSAG1Q6PB30 78 aa1.57□□□□□ -2.16
UBE2D3-226ENST00000508635 LCA10Q71F78 164 aa1.57□□□□□ -2.16
UBE2D3-226ENST00000508635 LINC00208Q96KT6 92 aa1.57□□□□□ -2.16
UBE2D3-226ENST00000508635 TRAV7A0A075B6U4 112 aa1.56□□□□□ -2.16
UBE2D3-226ENST00000508635 A8MUN3 132 aa1.56□□□□□ -2.16
UBE2D3-226ENST00000508635 MP68P56378 58 aa1.56□□□□□ -2.16
UBE2D3-226ENST00000508635 SMIM20Q8N5G0 67 aa1.56□□□□□ -2.16
UBE2D3-226ENST00000508635 PRO0628Q9UI54 55 aa1.56□□□□□ -2.16
UBE2D3-226ENST00000508635 S4R3F8 94 aa1.56□□□□□ -2.16
UBE2D3-226ENST00000508635 KRTAP6-3Q3LI67 103 aa1.55□□□□□ -2.16
UBE2D3-226ENST00000508635 FAM236AA0A1B0GUQ0 79 aa1.54□□□□□ -2.16
UBE2D3-226ENST00000508635 FAM236BA0A1B0GV22 79 aa1.54□□□□□ -2.16
UBE2D3-226ENST00000508635 MT1BP07438 61 aa1.54□□□□□ -2.16
UBE2D3-226ENST00000508635 RPS28P62857 69 aaKnown RBP1.54□□□□□ -2.16
UBE2D3-226ENST00000508635 KRTAP19-8Q3LI54 63 aa1.54□□□□□ -2.16
UBE2D3-226ENST00000508635 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
UBE2D3-226ENST00000508635 SPRR2GQ9BYE4 73 aa1.54□□□□□ -2.16
UBE2D3-226ENST00000508635 H0YAA0 97 aa1.53□□□□□ -2.16
UBE2D3-226ENST00000508635 NDUFC1O43677 76 aa1.53□□□□□ -2.16
UBE2D3-226ENST00000508635 Q5VV11 94 aa1.53□□□□□ -2.16
UBE2D3-226ENST00000508635 DMAC1Q96GE9 116 aa1.53□□□□□ -2.16
UBE2D3-226ENST00000508635 NEBP20929 6669 aa1.53□□□□□ -2.16
UBE2D3-226ENST00000508635 A6NN06 94 aa1.52□□□□□ -2.17
UBE2D3-226ENST00000508635 CRIPTQ9P021 101 aa1.52□□□□□ -2.17
UBE2D3-226ENST00000508635 SERP2Q8N6R1 65 aa1.51□□□□□ -2.17
UBE2D3-226ENST00000508635 ACYP2P14621 99 aa1.5□□□□□ -2.17
UBE2D3-226ENST00000508635 SPANXA2-OT1Q8N9U9 137 aa1.5□□□□□ -2.17
UBE2D3-226ENST00000508635 MUC12Q9UKN1 5478 aa1.49□□□□□ -2.17
UBE2D3-226ENST00000508635 ADM2Q7Z4H4 148 aa1.49□□□□□ -2.17
UBE2D3-226ENST00000508635 SNURFQ9Y675 71 aa1.49□□□□□ -2.17
UBE2D3-226ENST00000508635 P0C880 135 aa1.48□□□□□ -2.17
UBE2D3-226ENST00000508635 COX7CP15954 63 aa1.48□□□□□ -2.17
UBE2D3-226ENST00000508635 PMAIP1Q13794 54 aa1.48□□□□□ -2.17
UBE2D3-226ENST00000508635 C20orf197Q8N268 126 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms