RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CPSF4LA6NMK7 179 aaKnown RBP-0.31□□□□□ -2.46
ITGB1-216ENST00000493758 LINC00587B1AMM8 73 aa-0.31□□□□□ -2.46
ITGB1-216ENST00000493758 KAAG1Q9UBP8 84 aa-0.31□□□□□ -2.46
ITGB1-216ENST00000493758 A0A087WVE0 104 aa-0.32□□□□□ -2.46
ITGB1-216ENST00000493758 hADV29S1A0JD25 119 aa-0.32□□□□□ -2.46
ITGB1-216ENST00000493758 C7orf77A4D0Y5 90 aa-0.32□□□□□ -2.46
ITGB1-216ENST00000493758 H3BQF6 201 aa-0.32□□□□□ -2.46
ITGB1-216ENST00000493758 HSD52Q0P140 79 aa-0.32□□□□□ -2.46
ITGB1-216ENST00000493758 C6orf201Q7Z4U5 140 aa-0.32□□□□□ -2.46
ITGB1-216ENST00000493758 CRIPTQ9P021 101 aa-0.32□□□□□ -2.46
ITGB1-216ENST00000493758 A0A0G2JND7 137 aa-0.33□□□□□ -2.46
ITGB1-216ENST00000493758 I3L3M4 83 aa-0.33□□□□□ -2.46
ITGB1-216ENST00000493758 NDUFC1O43677 76 aa-0.33□□□□□ -2.46
ITGB1-216ENST00000493758 DEFB131AP59861 70 aa-0.33□□□□□ -2.46
ITGB1-216ENST00000493758 GNGT1P63211 74 aa-0.33□□□□□ -2.46
ITGB1-216ENST00000493758 MINOS1Q5TGZ0 78 aa-0.33□□□□□ -2.46
ITGB1-216ENST00000493758 CCL22O00626 93 aa-0.34□□□□□ -2.46
ITGB1-216ENST00000493758 GNGT2O14610 69 aa-0.34□□□□□ -2.46
ITGB1-216ENST00000493758 MRPL33O75394 65 aaKnown RBP-0.34□□□□□ -2.46
ITGB1-216ENST00000493758 DEFB1P60022 68 aa-0.34□□□□□ -2.46
ITGB1-216ENST00000493758 PMCHL1Q16048 86 aa-0.34□□□□□ -2.46
ITGB1-216ENST00000493758 PSMG4Q5JS54 123 aa-0.34□□□□□ -2.46
ITGB1-216ENST00000493758 GAFA1Q96PS6 74 aa-0.34□□□□□ -2.46
ITGB1-216ENST00000493758 CACFD1Q9UGQ2 172 aa-0.34□□□□□ -2.46
ITGB1-216ENST00000493758 H0Y9P7 68 aa-0.35□□□□□ -2.47
ITGB1-216ENST00000493758 ENHOQ6UWT2 76 aa-0.35□□□□□ -2.47
ITGB1-216ENST00000493758 DEFB107AQ8IZN7 70 aa-0.35□□□□□ -2.47
ITGB1-216ENST00000493758 NOP10Q9NPE3 64 aaKnown RBP-0.35□□□□□ -2.47
ITGB1-216ENST00000493758 TRBV25-1A0A075B6N4 114 aa-0.36□□□□□ -2.47
ITGB1-216ENST00000493758 AP4S1Q9Y587 144 aa-0.36□□□□□ -2.47
ITGB1-216ENST00000493758 ARMS2P0C7Q2 107 aa-0.37□□□□□ -2.47
ITGB1-216ENST00000493758 H1FX-AS1Q4G0G2 97 aa-0.37□□□□□ -2.47
ITGB1-216ENST00000493758 TMEM218A2RU14 115 aa-0.38□□□□□ -2.47
ITGB1-216ENST00000493758 NDUFA4O00483 81 aa-0.38□□□□□ -2.47
ITGB1-216ENST00000493758 MPC2O95563 127 aa-0.38□□□□□ -2.47
ITGB1-216ENST00000493758 S100PP25815 95 aa-0.38□□□□□ -2.47
ITGB1-216ENST00000493758 DEFB106AQ8N104 65 aa-0.38□□□□□ -2.47
ITGB1-216ENST00000493758 TRGV9Q99603 122 aa-0.38□□□□□ -2.47
ITGB1-216ENST00000493758 PMCHL2Q9BQD1 86 aa-0.38□□□□□ -2.47
ITGB1-216ENST00000493758 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.38□□□□□ -2.47
ITGB1-216ENST00000493758 TRAV30A0A087WSZ9 112 aa-0.39□□□□□ -2.47
ITGB1-216ENST00000493758 IQCF6A8MYZ5 107 aa-0.39□□□□□ -2.47
ITGB1-216ENST00000493758 H3BUA1 57 aa-0.39□□□□□ -2.47
ITGB1-216ENST00000493758 ATOX1O00244 68 aa-0.39□□□□□ -2.47
ITGB1-216ENST00000493758 WFDC13Q8IUB5 93 aa-0.39□□□□□ -2.47
ITGB1-216ENST00000493758 RHPN1-AS1Q9BWJ2 59 aa-0.39□□□□□ -2.47
ITGB1-216ENST00000493758 S4R3F8 94 aa-0.39□□□□□ -2.47
ITGB1-216ENST00000493758 TRBV7-7A0A0K0K1E9 115 aa-0.4□□□□□ -2.47
ITGB1-216ENST00000493758 H7BZZ5 65 aa-0.4□□□□□ -2.47
ITGB1-216ENST00000493758 NDUFA3O95167 84 aa-0.4□□□□□ -2.47
ITGB1-216ENST00000493758 SFTA3P0C7M3 94 aa-0.4□□□□□ -2.47
ITGB1-216ENST00000493758 HTN1P15515 57 aa-0.4□□□□□ -2.47
ITGB1-216ENST00000493758 S100A10P60903 97 aa-0.4□□□□□ -2.47
ITGB1-216ENST00000493758 CLPSL2Q6UWE3 100 aa-0.4□□□□□ -2.47
ITGB1-216ENST00000493758 HEPN1Q6WQI6 88 aa-0.4□□□□□ -2.47
ITGB1-216ENST00000493758 C9orf62Q8N4C0 152 aa-0.4□□□□□ -2.47
ITGB1-216ENST00000493758 MRPL34Q9BQ48 92 aaKnown RBP-0.4□□□□□ -2.47
ITGB1-216ENST00000493758 TCEAL7Q9BRU2 100 aa-0.4□□□□□ -2.47
ITGB1-216ENST00000493758 A8MTW9 85 aa-0.41□□□□□ -2.48
ITGB1-216ENST00000493758 PRLHP81277 87 aa-0.41□□□□□ -2.48
ITGB1-216ENST00000493758 ZNF720Q7Z2F6 126 aa-0.41□□□□□ -2.48
ITGB1-216ENST00000493758 SERP2Q8N6R1 65 aa-0.41□□□□□ -2.48
ITGB1-216ENST00000493758 RABAC1Q9UI14 185 aa-0.41□□□□□ -2.48
ITGB1-216ENST00000493758 MT-ATP8P03928 68 aa-0.42□□□□□ -2.48
ITGB1-216ENST00000493758 LINC00032P0C843 101 aa-0.42□□□□□ -2.48
ITGB1-216ENST00000493758 HMGN3Q15651 99 aa-0.42□□□□□ -2.48
ITGB1-216ENST00000493758 ETDBQ3ZM63 59 aa-0.42□□□□□ -2.48
ITGB1-216ENST00000493758 COL5A1-AS1Q5SY13 56 aa-0.42□□□□□ -2.48
ITGB1-216ENST00000493758 ALKAL2Q6UX46 152 aa-0.42□□□□□ -2.48
ITGB1-216ENST00000493758 PSENENQ9NZ42 101 aa-0.42□□□□□ -2.48
ITGB1-216ENST00000493758 CDKN2A-AS1Q9UH64 79 aa-0.42□□□□□ -2.48
ITGB1-216ENST00000493758 D6R8Y8 96 aa-0.43□□□□□ -2.48
ITGB1-216ENST00000493758 LEPROTL1O95214 131 aa-0.43□□□□□ -2.48
ITGB1-216ENST00000493758 MUSTN1Q8IVN3 82 aa-0.43□□□□□ -2.48
ITGB1-216ENST00000493758 C14orf144Q96I85 54 aa-0.43□□□□□ -2.48
ITGB1-216ENST00000493758 F8WEM9 126 aa-0.44□□□□□ -2.48
ITGB1-216ENST00000493758 K7EP34 96 aa-0.44□□□□□ -2.48
ITGB1-216ENST00000493758 FAUP35544 74 aaKnown RBP-0.44□□□□□ -2.48
ITGB1-216ENST00000493758 HIGD1BQ9P298 99 aa-0.44□□□□□ -2.48
ITGB1-216ENST00000493758 M0QZ58 72 aa-0.45□□□□□ -2.48
ITGB1-216ENST00000493758 RBP2P50120 134 aa-0.45□□□□□ -2.48
ITGB1-216ENST00000493758 TMEM167AQ8TBQ9 72 aa-0.45□□□□□ -2.48
ITGB1-216ENST00000493758 DPY30Q9C005 99 aa-0.45□□□□□ -2.48
ITGB1-216ENST00000493758 IGLC2P0DOY2 106 aa-0.46□□□□□ -2.48
ITGB1-216ENST00000493758 IGLC3P0DOY3 106 aa-0.46□□□□□ -2.48
ITGB1-216ENST00000493758 PLGLAQ15195 96 aa-0.46□□□□□ -2.48
ITGB1-216ENST00000493758 ACBD7Q8N6N7 88 aa-0.46□□□□□ -2.48
ITGB1-216ENST00000493758 PRCDQ00LT1 54 aa-0.47□□□□□ -2.48
ITGB1-216ENST00000493758 NMSQ5H8A3 153 aa-0.47□□□□□ -2.48
ITGB1-216ENST00000493758 A0A087WWC5 75 aa-0.48□□□□□ -2.49
ITGB1-216ENST00000493758 K7EIM0 57 aa-0.48□□□□□ -2.49
ITGB1-216ENST00000493758 RPL39P5Q59GN2 51 aa-0.48□□□□□ -2.49
ITGB1-216ENST00000493758 C6orf48Q9UBA6 75 aa-0.48□□□□□ -2.49
ITGB1-216ENST00000493758 LINC01546A6NGU7 62 aa-0.49□□□□□ -2.49
ITGB1-216ENST00000493758 SMIM11AP58511 58 aa-0.49□□□□□ -2.49
ITGB1-216ENST00000493758 RPL38P63173 70 aaKnown RBP-0.49□□□□□ -2.49
ITGB1-216ENST00000493758 M0R143 59 aa-0.5□□□□□ -2.49
ITGB1-216ENST00000493758 COX7BP24311 80 aa-0.5□□□□□ -2.49
ITGB1-216ENST00000493758 WT1-ASQ06250 92 aa-0.5□□□□□ -2.49
ITGB1-216ENST00000493758 NCBP2-AS2Q69YL0 99 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms