RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 NEBP20929 6669 aa5.16□□□□□ -1.58
SNRNP200-207ENST00000493271 PRR15Q8IV56 129 aa5.16□□□□□ -1.58
SNRNP200-207ENST00000493271 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
SNRNP200-207ENST00000493271 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
SNRNP200-207ENST00000493271 OCR1Q9BZK8 76 aa5.15□□□□□ -1.59
SNRNP200-207ENST00000493271 MUC12Q9UKN1 5478 aa5.14□□□□□ -1.59
SNRNP200-207ENST00000493271 H1FX-AS1Q4G0G2 97 aa5.14□□□□□ -1.59
SNRNP200-207ENST00000493271 C20orf197Q8N268 126 aa5.13□□□□□ -1.59
SNRNP200-207ENST00000493271 TMEM258P61165 79 aa5.12□□□□□ -1.59
SNRNP200-207ENST00000493271 KLKP1Q107X0 134 aa5.12□□□□□ -1.59
SNRNP200-207ENST00000493271 CASC2Q6XLA1 102 aa5.12□□□□□ -1.59
SNRNP200-207ENST00000493271 NDUFC1O43677 76 aa5.11□□□□□ -1.59
SNRNP200-207ENST00000493271 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
SNRNP200-207ENST00000493271 TMEM254Q8TBM7 123 aa5.1□□□□□ -1.59
SNRNP200-207ENST00000493271 C8orf17Q9NRJ1 99 aa5.1□□□□□ -1.59
SNRNP200-207ENST00000493271 MMP24-AS1A0A0U1RRL7 71 aa5.09□□□□□ -1.59
SNRNP200-207ENST00000493271 A6NN06 94 aa5.09□□□□□ -1.59
SNRNP200-207ENST00000493271 hDV103S1A0JD37 113 aa5.07□□□□□ -1.6
SNRNP200-207ENST00000493271 C5orf47Q569G3 176 aa5.07□□□□□ -1.6
SNRNP200-207ENST00000493271 MP68P56378 58 aa5.06□□□□□ -1.6
SNRNP200-207ENST00000493271 ATP5EP56381 51 aaPredicted RBP5.06□□□□□ -1.6
SNRNP200-207ENST00000493271 CYSTM1Q9H1C7 97 aa5.06□□□□□ -1.6
SNRNP200-207ENST00000493271 H3BPC8 53 aa5.05□□□□□ -1.6
SNRNP200-207ENST00000493271 TP53AIP1Q9HCN2 124 aa5.05□□□□□ -1.6
SNRNP200-207ENST00000493271 SNURFQ9Y675 71 aa5.05□□□□□ -1.6
SNRNP200-207ENST00000493271 H7BZZ5 65 aa5.04□□□□□ -1.6
SNRNP200-207ENST00000493271 MRPL34Q9BQ48 92 aaKnown RBP5.03□□□□□ -1.6
SNRNP200-207ENST00000493271 Q5VV11 94 aa5.02□□□□□ -1.61
SNRNP200-207ENST00000493271 TRAV22A0A0B4J277 110 aa5.01□□□□□ -1.61
SNRNP200-207ENST00000493271 H0Y9P7 68 aa5.01□□□□□ -1.61
SNRNP200-207ENST00000493271 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
SNRNP200-207ENST00000493271 C7orf65Q6ZTY9 151 aa5□□□□□ -1.61
SNRNP200-207ENST00000493271 NDUFS5O43920 106 aa4.99□□□□□ -1.61
SNRNP200-207ENST00000493271 MT1BP07438 61 aa4.98□□□□□ -1.61
SNRNP200-207ENST00000493271 KRTAP10-5P60370 271 aa4.97□□□□□ -1.61
SNRNP200-207ENST00000493271 RPS28P62857 69 aaKnown RBP4.97□□□□□ -1.61
SNRNP200-207ENST00000493271 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
SNRNP200-207ENST00000493271 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
SNRNP200-207ENST00000493271 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
SNRNP200-207ENST00000493271 KMT2DO14686 5537 aa4.96□□□□□ -1.62
SNRNP200-207ENST00000493271 IGKV2D-30A0A075B6S6 120 aa4.96□□□□□ -1.62
SNRNP200-207ENST00000493271 IGKV2-30P06310 120 aa4.96□□□□□ -1.62
SNRNP200-207ENST00000493271 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
SNRNP200-207ENST00000493271 SERP1Q9Y6X1 66 aa4.95□□□□□ -1.62
SNRNP200-207ENST00000493271 C1orf64Q8NEQ6 169 aa4.94□□□□□ -1.62
SNRNP200-207ENST00000493271 KRTAP4-11Q9BYQ6 195 aa4.93□□□□□ -1.62
SNRNP200-207ENST00000493271 LOC101927531A0A1B0GV80 90 aa4.92□□□□□ -1.62
SNRNP200-207ENST00000493271 SPANXA2-OT1Q8N9U9 137 aa4.92□□□□□ -1.62
SNRNP200-207ENST00000493271 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.63
SNRNP200-207ENST00000493271 C4orf26Q17RF5 130 aa4.9□□□□□ -1.63
SNRNP200-207ENST00000493271 CSAG1Q6PB30 78 aa4.9□□□□□ -1.63
SNRNP200-207ENST00000493271 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.63
SNRNP200-207ENST00000493271 CYP4F30PQ9H0H9 118 aa4.9□□□□□ -1.63
SNRNP200-207ENST00000493271 Q5W150 140 aa4.88□□□□□ -1.63
SNRNP200-207ENST00000493271 S4R3F8 94 aa4.88□□□□□ -1.63
SNRNP200-207ENST00000493271 SMIM26A0A096LP01 95 aa4.84□□□□□ -1.63
SNRNP200-207ENST00000493271 CRIPTQ9P021 101 aa4.83□□□□□ -1.64
SNRNP200-207ENST00000493271 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
SNRNP200-207ENST00000493271 LCA10Q71F78 164 aa4.82□□□□□ -1.64
SNRNP200-207ENST00000493271 KRTAP3-1Q9BYR8 98 aa4.8□□□□□ -1.64
SNRNP200-207ENST00000493271 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
SNRNP200-207ENST00000493271 SPRR2EP22531 72 aa4.76□□□□□ -1.65
SNRNP200-207ENST00000493271 SPRR2BP35325 72 aa4.76□□□□□ -1.65
SNRNP200-207ENST00000493271 SPRR2AP35326 72 aa4.76□□□□□ -1.65
SNRNP200-207ENST00000493271 SPRR2FQ96RM1 72 aa4.76□□□□□ -1.65
SNRNP200-207ENST00000493271 COA5Q86WW8 74 aa4.75□□□□□ -1.65
SNRNP200-207ENST00000493271 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
SNRNP200-207ENST00000493271 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
SNRNP200-207ENST00000493271 DMAC1Q96GE9 116 aa4.73□□□□□ -1.65
SNRNP200-207ENST00000493271 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
SNRNP200-207ENST00000493271 V9GYY9 64 aa4.73□□□□□ -1.65
SNRNP200-207ENST00000493271 ACYP2P14621 99 aa4.72□□□□□ -1.65
SNRNP200-207ENST00000493271 A8MUN3 132 aa4.69□□□□□ -1.66
SNRNP200-207ENST00000493271 Q1T7F1 81 aa4.69□□□□□ -1.66
SNRNP200-207ENST00000493271 CHKB-CPT1BH3BT56 60 aa4.67□□□□□ -1.66
SNRNP200-207ENST00000493271 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
SNRNP200-207ENST00000493271 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
SNRNP200-207ENST00000493271 H0YAA0 97 aa4.65□□□□□ -1.67
SNRNP200-207ENST00000493271 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
SNRNP200-207ENST00000493271 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
SNRNP200-207ENST00000493271 SPRR2DP22532 72 aa4.61□□□□□ -1.67
SNRNP200-207ENST00000493271 MT1XP80297 61 aa4.6□□□□□ -1.67
SNRNP200-207ENST00000493271 LINC01558Q9Y6Z2 57 aa4.6□□□□□ -1.67
SNRNP200-207ENST00000493271 SPTSSBQ8NFR3 76 aa4.59□□□□□ -1.67
SNRNP200-207ENST00000493271 PLAC4Q8WY50 150 aa4.59□□□□□ -1.67
SNRNP200-207ENST00000493271 PRR15LQ9BU68 103 aa4.58□□□□□ -1.68
SNRNP200-207ENST00000493271 PSPHP1O15172 72 aa4.57□□□□□ -1.68
SNRNP200-207ENST00000493271 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
SNRNP200-207ENST00000493271 ADM2Q7Z4H4 148 aa4.52□□□□□ -1.69
SNRNP200-207ENST00000493271 BRK1Q8WUW1 75 aa4.51□□□□□ -1.69
SNRNP200-207ENST00000493271 A0A1B0GU69 56 aa4.5□□□□□ -1.69
SNRNP200-207ENST00000493271 A6NED7 52 aa4.48□□□□□ -1.69
SNRNP200-207ENST00000493271 R4GN34 69 aa4.48□□□□□ -1.69
SNRNP200-207ENST00000493271 SEC61GP60059 68 aa4.47□□□□□ -1.69
SNRNP200-207ENST00000493271 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
SNRNP200-207ENST00000493271 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
SNRNP200-207ENST00000493271 M0QZ58 72 aa4.4□□□□□ -1.71
SNRNP200-207ENST00000493271 KRTAP10-12P60413 245 aa4.4□□□□□ -1.71
SNRNP200-207ENST00000493271 UQCR11O14957 56 aa4.39□□□□□ -1.71
SNRNP200-207ENST00000493271 P0C880 135 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms