RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 SPRR1AP35321 89 aa3.61□□□□□ -1.83
TMEM39A-209ENST00000486235 MP68P56378 58 aa3.61□□□□□ -1.83
TMEM39A-209ENST00000486235 SPANXA2-OT1Q8N9U9 137 aa3.61□□□□□ -1.83
TMEM39A-209ENST00000486235 ZCCHC13Q8WW36 166 aaKnown RBP3.61□□□□□ -1.83
TMEM39A-209ENST00000486235 HCG22E2RYF7 251 aa3.6□□□□□ -1.83
TMEM39A-209ENST00000486235 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
TMEM39A-209ENST00000486235 SPAG11AQ6PDA7 123 aa3.6□□□□□ -1.83
TMEM39A-209ENST00000486235 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
TMEM39A-209ENST00000486235 PSPHP1O15172 72 aa3.59□□□□□ -1.83
TMEM39A-209ENST00000486235 NDUFS5O43920 106 aa3.59□□□□□ -1.83
TMEM39A-209ENST00000486235 HIGD2AQ9BW72 106 aa3.59□□□□□ -1.83
TMEM39A-209ENST00000486235 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
TMEM39A-209ENST00000486235 CAMK2N1Q7Z7J9 78 aa3.58□□□□□ -1.84
TMEM39A-209ENST00000486235 MT1HP80294 61 aa3.57□□□□□ -1.84
TMEM39A-209ENST00000486235 Q9BRP9 147 aa3.57□□□□□ -1.84
TMEM39A-209ENST00000486235 LIMD2Q9BT23 127 aa3.57□□□□□ -1.84
TMEM39A-209ENST00000486235 A0A1W2PNM2 257 aa3.56□□□□□ -1.84
TMEM39A-209ENST00000486235 KRTAP19-2Q3LHN2 52 aa3.55□□□□□ -1.84
TMEM39A-209ENST00000486235 C1orf64Q8NEQ6 169 aa3.55□□□□□ -1.84
TMEM39A-209ENST00000486235 TRAV22A0A0B4J277 110 aa3.54□□□□□ -1.84
TMEM39A-209ENST00000486235 SPINK1P00995 79 aa3.54□□□□□ -1.84
TMEM39A-209ENST00000486235 DSCR10P59022 87 aa3.54□□□□□ -1.84
TMEM39A-209ENST00000486235 Q8N9L7 120 aa3.54□□□□□ -1.84
TMEM39A-209ENST00000486235 ZNF706Q9Y5V0 76 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-209ENST00000486235 SPRR1BP22528 89 aa3.53□□□□□ -1.84
TMEM39A-209ENST00000486235 PMAIP1Q13794 54 aa3.53□□□□□ -1.84
TMEM39A-209ENST00000486235 DEFB105AQ8NG35 78 aa3.53□□□□□ -1.84
TMEM39A-209ENST00000486235 TP53AIP1Q9HCN2 124 aa3.53□□□□□ -1.84
TMEM39A-209ENST00000486235 IGHV6-1A0A0B4J1U7 121 aa3.52□□□□□ -1.85
TMEM39A-209ENST00000486235 K7EQZ3 153 aa3.52□□□□□ -1.85
TMEM39A-209ENST00000486235 MOBPQ13875 183 aa3.52□□□□□ -1.85
TMEM39A-209ENST00000486235 M0R2T5 61 aa3.51□□□□□ -1.85
TMEM39A-209ENST00000486235 PCOTHQ58A44 107 aa3.51□□□□□ -1.85
TMEM39A-209ENST00000486235 LINC00208Q96KT6 92 aa3.51□□□□□ -1.85
TMEM39A-209ENST00000486235 A8MWP4 228 aa3.5□□□□□ -1.85
TMEM39A-209ENST00000486235 CASC2Q6XLA1 102 aa3.5□□□□□ -1.85
TMEM39A-209ENST00000486235 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
TMEM39A-209ENST00000486235 LOC101927531A0A1B0GV80 90 aa3.49□□□□□ -1.85
TMEM39A-209ENST00000486235 LINC00483Q53H64 154 aa3.49□□□□□ -1.85
TMEM39A-209ENST00000486235 IGFL1Q6UW32 110 aa3.49□□□□□ -1.85
TMEM39A-209ENST00000486235 ATP11AUNQ6ZP68 121 aa3.49□□□□□ -1.85
TMEM39A-209ENST00000486235 C9orf92A6NGG3 77 aa3.48□□□□□ -1.85
TMEM39A-209ENST00000486235 KRTAP16-1A8MUX0 517 aa3.48□□□□□ -1.85
TMEM39A-209ENST00000486235 H0Y9P7 68 aa3.48□□□□□ -1.85
TMEM39A-209ENST00000486235 RPS29P62273 56 aaKnown RBP3.48□□□□□ -1.85
TMEM39A-209ENST00000486235 SSBP3-AS1Q7Z2R9 100 aa3.48□□□□□ -1.85
TMEM39A-209ENST00000486235 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
TMEM39A-209ENST00000486235 A0A087WSZ3 146 aa3.46□□□□□ -1.86
TMEM39A-209ENST00000486235 COX6B2Q6YFQ2 88 aa3.46□□□□□ -1.86
TMEM39A-209ENST00000486235 ST20-AS1Q8NBB2 130 aa3.46□□□□□ -1.86
TMEM39A-209ENST00000486235 C8orf87E5RJ46 101 aa3.45□□□□□ -1.86
TMEM39A-209ENST00000486235 KTN1-AS1Q86SY8 53 aa3.45□□□□□ -1.86
TMEM39A-209ENST00000486235 LINC00472Q9H8W2 130 aa3.45□□□□□ -1.86
TMEM39A-209ENST00000486235 RBM12B-AS1Q9P1G2 102 aa3.45□□□□□ -1.86
TMEM39A-209ENST00000486235 CHKB-CPT1BH3BT56 60 aa3.44□□□□□ -1.86
TMEM39A-209ENST00000486235 Q5VV11 94 aa3.44□□□□□ -1.86
TMEM39A-209ENST00000486235 WFDC13Q8IUB5 93 aa3.44□□□□□ -1.86
TMEM39A-209ENST00000486235 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
TMEM39A-209ENST00000486235 FLGP20930 4061 aaPredicted RBP3.44□□□□□ -1.86
TMEM39A-209ENST00000486235 SSPOA2VEC9 5147 aa3.43□□□□□ -1.86
TMEM39A-209ENST00000486235 A8MUN3 132 aa3.43□□□□□ -1.86
TMEM39A-209ENST00000486235 LINC01558Q9Y6Z2 57 aa3.43□□□□□ -1.86
TMEM39A-209ENST00000486235 COA5Q86WW8 74 aa3.42□□□□□ -1.86
TMEM39A-209ENST00000486235 USH2AO75445 5202 aa3.41□□□□□ -1.86
TMEM39A-209ENST00000486235 MMP24-AS1A0A0U1RRL7 71 aa3.41□□□□□ -1.86
TMEM39A-209ENST00000486235 A6NED7 52 aa3.41□□□□□ -1.86
TMEM39A-209ENST00000486235 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
TMEM39A-209ENST00000486235 A0A1B0GVX0 72 aa3.4□□□□□ -1.87
TMEM39A-209ENST00000486235 RPL37P61927 97 aaKnown RBP3.39□□□□□ -1.87
TMEM39A-209ENST00000486235 C8orf17Q9NRJ1 99 aa3.39□□□□□ -1.87
TMEM39A-209ENST00000486235 C7orf65Q6ZTY9 151 aa3.38□□□□□ -1.87
TMEM39A-209ENST00000486235 MRPL34Q9BQ48 92 aaKnown RBP3.37□□□□□ -1.87
TMEM39A-209ENST00000486235 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
TMEM39A-209ENST00000486235 A6NN06 94 aa3.36□□□□□ -1.87
TMEM39A-209ENST00000486235 ACYP2P14621 99 aa3.36□□□□□ -1.87
TMEM39A-209ENST00000486235 DEFB116Q30KQ4 102 aa3.35□□□□□ -1.87
TMEM39A-209ENST00000486235 SPTSSBQ8NFR3 76 aa3.34□□□□□ -1.87
TMEM39A-209ENST00000486235 Q96NJ1 140 aa3.34□□□□□ -1.87
TMEM39A-209ENST00000486235 A0A0G2JQZ4 141 aa3.33□□□□□ -1.88
TMEM39A-209ENST00000486235 LCA10Q71F78 164 aa3.33□□□□□ -1.88
TMEM39A-209ENST00000486235 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
TMEM39A-209ENST00000486235 HRES1P13985 223 aa3.31□□□□□ -1.88
TMEM39A-209ENST00000486235 DMAC1Q96GE9 116 aa3.3□□□□□ -1.88
TMEM39A-209ENST00000486235 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
TMEM39A-209ENST00000486235 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
TMEM39A-209ENST00000486235 MT2AP02795 61 aa3.28□□□□□ -1.88
TMEM39A-209ENST00000486235 UQCR11O14957 56 aa3.27□□□□□ -1.89
TMEM39A-209ENST00000486235 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
TMEM39A-209ENST00000486235 A0A1B0GU69 56 aa3.26□□□□□ -1.89
TMEM39A-209ENST00000486235 SPATA8Q6RVD6 105 aa3.26□□□□□ -1.89
TMEM39A-209ENST00000486235 K7ERS5 55 aa3.25□□□□□ -1.89
TMEM39A-209ENST00000486235 MT1FP04733 61 aa3.25□□□□□ -1.89
TMEM39A-209ENST00000486235 SPINK7P58062 85 aa3.24□□□□□ -1.89
TMEM39A-209ENST00000486235 LINC00313P59037 77 aa3.23□□□□□ -1.89
TMEM39A-209ENST00000486235 KRTAP10-10P60014 251 aa3.23□□□□□ -1.89
TMEM39A-209ENST00000486235 A8MU10 97 aa3.22□□□□□ -1.89
TMEM39A-209ENST00000486235 MIR22HGQ0VDD5 57 aa3.21□□□□□ -1.9
TMEM39A-209ENST00000486235 Q5W150 140 aa3.21□□□□□ -1.9
TMEM39A-209ENST00000486235 LINC01554Q52M75 96 aa3.19□□□□□ -1.9
TMEM39A-209ENST00000486235 C20orf166-AS1Q96NR2 134 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms