RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 C8orf17Q9NRJ1 99 aa2.3□□□□□ -2.04
SNRNP40-204ENST00000474025 PRO1854Q9UHT4 67 aa2.3□□□□□ -2.04
SNRNP40-204ENST00000474025 NDUFB1O75438 58 aa2.29□□□□□ -2.04
SNRNP40-204ENST00000474025 C2orf91Q6ZV80 131 aa2.29□□□□□ -2.04
SNRNP40-204ENST00000474025 KTN1-AS1Q86SY8 53 aa2.29□□□□□ -2.04
SNRNP40-204ENST00000474025 HIGD1BQ9P298 99 aa2.29□□□□□ -2.04
SNRNP40-204ENST00000474025 FAM236AA0A1B0GUQ0 79 aa2.28□□□□□ -2.04
SNRNP40-204ENST00000474025 FAM236BA0A1B0GV22 79 aa2.28□□□□□ -2.04
SNRNP40-204ENST00000474025 NDUFAF8A1L188 74 aa2.28□□□□□ -2.04
SNRNP40-204ENST00000474025 SPRR2EP22531 72 aa2.28□□□□□ -2.04
SNRNP40-204ENST00000474025 S100A2P29034 98 aa2.28□□□□□ -2.04
SNRNP40-204ENST00000474025 SPRR2BP35325 72 aa2.28□□□□□ -2.04
SNRNP40-204ENST00000474025 SPRR2AP35326 72 aa2.28□□□□□ -2.04
SNRNP40-204ENST00000474025 FXYD2P54710 66 aa2.28□□□□□ -2.04
SNRNP40-204ENST00000474025 Q6ZQT0 140 aa2.28□□□□□ -2.04
SNRNP40-204ENST00000474025 LCA10Q71F78 164 aa2.28□□□□□ -2.04
SNRNP40-204ENST00000474025 CEND1Q8N111 149 aa2.28□□□□□ -2.04
SNRNP40-204ENST00000474025 BPY2O14599 106 aa2.27□□□□□ -2.05
SNRNP40-204ENST00000474025 TAX1BP3O14907 124 aa2.27□□□□□ -2.05
SNRNP40-204ENST00000474025 RBM3P98179 157 aaKnown RBP2.27□□□□□ -2.05
SNRNP40-204ENST00000474025 MMP24-AS1A0A0U1RRL7 71 aa2.25□□□□□ -2.05
SNRNP40-204ENST00000474025 K7ERS5 55 aa2.25□□□□□ -2.05
SNRNP40-204ENST00000474025 C7orf65Q6ZTY9 151 aa2.25□□□□□ -2.05
SNRNP40-204ENST00000474025 GTF2H5Q6ZYL4 71 aa2.25□□□□□ -2.05
SNRNP40-204ENST00000474025 TMEM254Q8TBM7 123 aa2.25□□□□□ -2.05
SNRNP40-204ENST00000474025 SPRR2FQ96RM1 72 aa2.25□□□□□ -2.05
SNRNP40-204ENST00000474025 MRPL34Q9BQ48 92 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-204ENST00000474025 K7ERJ3 54 aa2.24□□□□□ -2.05
SNRNP40-204ENST00000474025 COX6CP09669 75 aa2.24□□□□□ -2.05
SNRNP40-204ENST00000474025 HIST1H4AP62805 103 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-204ENST00000474025 SPATA45Q537H7 98 aa2.24□□□□□ -2.05
SNRNP40-204ENST00000474025 COL5A1-AS1Q5SY13 56 aa2.24□□□□□ -2.05
SNRNP40-204ENST00000474025 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
SNRNP40-204ENST00000474025 Q5W150 140 aa2.23□□□□□ -2.05
SNRNP40-204ENST00000474025 hDV103S1A0JD37 113 aa2.22□□□□□ -2.05
SNRNP40-204ENST00000474025 SPRR2DP22532 72 aa2.22□□□□□ -2.05
SNRNP40-204ENST00000474025 KLKP1Q107X0 134 aa2.22□□□□□ -2.05
SNRNP40-204ENST00000474025 LUZP6Q538Z0 58 aa2.22□□□□□ -2.05
SNRNP40-204ENST00000474025 BRK1Q8WUW1 75 aa2.22□□□□□ -2.05
SNRNP40-204ENST00000474025 VAMP8Q9BV40 100 aa2.22□□□□□ -2.05
SNRNP40-204ENST00000474025 LOC110117498A0A087WWA1 95 aa2.21□□□□□ -2.06
SNRNP40-204ENST00000474025 HSD52Q0P140 79 aa2.21□□□□□ -2.06
SNRNP40-204ENST00000474025 LINC01554Q52M75 96 aa2.21□□□□□ -2.06
SNRNP40-204ENST00000474025 CSAG1Q6PB30 78 aa2.21□□□□□ -2.06
SNRNP40-204ENST00000474025 S4R3F8 94 aa2.21□□□□□ -2.06
SNRNP40-204ENST00000474025 K7EQZ3 153 aa2.2□□□□□ -2.06
SNRNP40-204ENST00000474025 UQCRQO14949 82 aa2.2□□□□□ -2.06
SNRNP40-204ENST00000474025 BAALC-AS2P0C853 105 aa2.2□□□□□ -2.06
SNRNP40-204ENST00000474025 TMEM258P61165 79 aa2.19□□□□□ -2.06
SNRNP40-204ENST00000474025 NREPQ16612 68 aa2.19□□□□□ -2.06
SNRNP40-204ENST00000474025 JMJD7-PLA2G4BH0Y9G9 81 aa2.18□□□□□ -2.06
SNRNP40-204ENST00000474025 PDE6GP18545 87 aa2.18□□□□□ -2.06
SNRNP40-204ENST00000474025 KRTAP8-1Q8IUC2 63 aa2.18□□□□□ -2.06
SNRNP40-204ENST00000474025 PRO2289Q9P1D8 64 aa2.18□□□□□ -2.06
SNRNP40-204ENST00000474025 A6NED7 52 aa2.17□□□□□ -2.06
SNRNP40-204ENST00000474025 NAA38Q9BRA0 125 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-204ENST00000474025 C14orf132Q9NPU4 83 aa2.17□□□□□ -2.06
SNRNP40-204ENST00000474025 CRIPTQ9P021 101 aa2.17□□□□□ -2.06
SNRNP40-204ENST00000474025 HCG22E2RYF7 251 aa2.16□□□□□ -2.06
SNRNP40-204ENST00000474025 CCDC179H3BU77 68 aa2.16□□□□□ -2.06
SNRNP40-204ENST00000474025 MT1XP80297 61 aa2.16□□□□□ -2.06
SNRNP40-204ENST00000474025 C1orf64Q8NEQ6 169 aa2.16□□□□□ -2.06
SNRNP40-204ENST00000474025 ATXN8Q156A1 80 aa2.15□□□□□ -2.07
SNRNP40-204ENST00000474025 KRTAP12-2P59991 146 aa2.14□□□□□ -2.07
SNRNP40-204ENST00000474025 CASC2Q6XLA1 102 aa2.14□□□□□ -2.07
SNRNP40-204ENST00000474025 Q8N9L7 120 aa2.14□□□□□ -2.07
SNRNP40-204ENST00000474025 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-204ENST00000474025 H3BT86 120 aa2.13□□□□□ -2.07
SNRNP40-204ENST00000474025 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
SNRNP40-204ENST00000474025 SPANXA2-OT1Q8N9U9 137 aa2.12□□□□□ -2.07
SNRNP40-204ENST00000474025 SERP1Q9Y6X1 66 aa2.12□□□□□ -2.07
SNRNP40-204ENST00000474025 A0A087WVE0 104 aa2.11□□□□□ -2.07
SNRNP40-204ENST00000474025 PYY3Q5JQD4 70 aa2.11□□□□□ -2.07
SNRNP40-204ENST00000474025 ADM2Q7Z4H4 148 aa2.11□□□□□ -2.07
SNRNP40-204ENST00000474025 UQCR10Q9UDW1 63 aa2.11□□□□□ -2.07
SNRNP40-204ENST00000474025 H0YAA0 97 aa2.09□□□□□ -2.07
SNRNP40-204ENST00000474025 H3BPC8 53 aa2.09□□□□□ -2.07
SNRNP40-204ENST00000474025 PLAC4Q8WY50 150 aa2.08□□□□□ -2.08
SNRNP40-204ENST00000474025 TRAV7A0A075B6U4 112 aa2.07□□□□□ -2.08
SNRNP40-204ENST00000474025 KRTAP9-6A8MVA2 160 aa2.07□□□□□ -2.08
SNRNP40-204ENST00000474025 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
SNRNP40-204ENST00000474025 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
SNRNP40-204ENST00000474025 CYP4F30PQ9H0H9 118 aa2.06□□□□□ -2.08
SNRNP40-204ENST00000474025 TP53AIP1Q9HCN2 124 aa2.05□□□□□ -2.08
SNRNP40-204ENST00000474025 NDUFC1O43677 76 aa2.04□□□□□ -2.08
SNRNP40-204ENST00000474025 ATP5EP56381 51 aaPredicted RBP2.04□□□□□ -2.08
SNRNP40-204ENST00000474025 KRTAP10-12P60413 245 aa2.04□□□□□ -2.08
SNRNP40-204ENST00000474025 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
SNRNP40-204ENST00000474025 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
SNRNP40-204ENST00000474025 F8W1H4 67 aa2.03□□□□□ -2.08
SNRNP40-204ENST00000474025 K7EP34 96 aa2.03□□□□□ -2.08
SNRNP40-204ENST00000474025 COX7CP15954 63 aa2.03□□□□□ -2.08
SNRNP40-204ENST00000474025 A0A1B0GU33 70 aa2.02□□□□□ -2.09
SNRNP40-204ENST00000474025 MT-ATP8P03928 68 aa2.02□□□□□ -2.09
SNRNP40-204ENST00000474025 R4GN34 69 aa2.02□□□□□ -2.09
SNRNP40-204ENST00000474025 ROMO1P60602 79 aa2.01□□□□□ -2.09
SNRNP40-204ENST00000474025 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
SNRNP40-204ENST00000474025 UBL5Q9BZL1 73 aa2.01□□□□□ -2.09
SNRNP40-204ENST00000474025 TRAV22A0A0B4J277 110 aa2□□□□□ -2.09
SNRNP40-204ENST00000474025 LOC101927531A0A1B0GV80 90 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms