RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CCDC179H3BU77 68 aa6.07□□□□□ -1.44
AC004540.1-204ENST00000449537 NOTCH2NLQ7Z3S9 236 aa6.07□□□□□ -1.44
AC004540.1-204ENST00000449537 C20orf197Q8N268 126 aa6.06□□□□□ -1.44
AC004540.1-204ENST00000449537 TRAV22A0A0B4J277 110 aa6.05□□□□□ -1.44
AC004540.1-204ENST00000449537 NDUFC1O43677 76 aa6.05□□□□□ -1.44
AC004540.1-204ENST00000449537 MPLKIPQ8TAP9 179 aa6.05□□□□□ -1.44
AC004540.1-204ENST00000449537 A6NN06 94 aa6.03□□□□□ -1.44
AC004540.1-204ENST00000449537 H0Y9P7 68 aa6.03□□□□□ -1.44
AC004540.1-204ENST00000449537 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
AC004540.1-204ENST00000449537 KLKP1Q107X0 134 aa6.02□□□□□ -1.45
AC004540.1-204ENST00000449537 HRES1P13985 223 aa6.01□□□□□ -1.45
AC004540.1-204ENST00000449537 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
AC004540.1-204ENST00000449537 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
AC004540.1-204ENST00000449537 ZCCHC13Q8WW36 166 aaKnown RBP6□□□□□ -1.45
AC004540.1-204ENST00000449537 SNURFQ9Y675 71 aa5.98□□□□□ -1.45
AC004540.1-204ENST00000449537 TMEM258P61165 79 aa5.97□□□□□ -1.45
AC004540.1-204ENST00000449537 LINC00208Q96KT6 92 aa5.97□□□□□ -1.45
AC004540.1-204ENST00000449537 LOC101927531A0A1B0GV80 90 aa5.96□□□□□ -1.46
AC004540.1-204ENST00000449537 ATP5EP56381 51 aaPredicted RBP5.96□□□□□ -1.46
AC004540.1-204ENST00000449537 C1orf64Q8NEQ6 169 aa5.96□□□□□ -1.46
AC004540.1-204ENST00000449537 H7BZZ5 65 aa5.9□□□□□ -1.46
AC004540.1-204ENST00000449537 C7orf65Q6ZTY9 151 aa5.89□□□□□ -1.47
AC004540.1-204ENST00000449537 Q5W150 140 aa5.88□□□□□ -1.47
AC004540.1-204ENST00000449537 SPRR2EP22531 72 aa5.87□□□□□ -1.47
AC004540.1-204ENST00000449537 SPRR2BP35325 72 aa5.87□□□□□ -1.47
AC004540.1-204ENST00000449537 SPRR2AP35326 72 aa5.87□□□□□ -1.47
AC004540.1-204ENST00000449537 CYSTM1Q9H1C7 97 aa5.87□□□□□ -1.47
AC004540.1-204ENST00000449537 GPR98Q8WXG9 6306 aa5.86□□□□□ -1.47
AC004540.1-204ENST00000449537 IGKV2-30P06310 120 aa5.85□□□□□ -1.47
AC004540.1-204ENST00000449537 SPANXA2-OT1Q8N9U9 137 aa5.85□□□□□ -1.47
AC004540.1-204ENST00000449537 IGKV2D-30A0A075B6S6 120 aa5.84□□□□□ -1.47
AC004540.1-204ENST00000449537 SPINK7P58062 85 aa5.84□□□□□ -1.47
AC004540.1-204ENST00000449537 CYP4F30PQ9H0H9 118 aa5.83□□□□□ -1.48
AC004540.1-204ENST00000449537 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
AC004540.1-204ENST00000449537 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
AC004540.1-204ENST00000449537 MT1BP07438 61 aa5.77□□□□□ -1.49
AC004540.1-204ENST00000449537 SERP1Q9Y6X1 66 aa5.77□□□□□ -1.49
AC004540.1-204ENST00000449537 Q5VV11 94 aa5.75□□□□□ -1.49
AC004540.1-204ENST00000449537 RPS28P62857 69 aaKnown RBP5.72□□□□□ -1.49
AC004540.1-204ENST00000449537 A8MUN3 132 aa5.71□□□□□ -1.5
AC004540.1-204ENST00000449537 ACYP2P14621 99 aa5.7□□□□□ -1.5
AC004540.1-204ENST00000449537 SPRR2DP22532 72 aa5.69□□□□□ -1.5
AC004540.1-204ENST00000449537 DMAC1Q96GE9 116 aa5.69□□□□□ -1.5
AC004540.1-204ENST00000449537 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
AC004540.1-204ENST00000449537 CHKB-CPT1BH3BT56 60 aa5.66□□□□□ -1.5
AC004540.1-204ENST00000449537 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.5
AC004540.1-204ENST00000449537 COA5Q86WW8 74 aa5.65□□□□□ -1.5
AC004540.1-204ENST00000449537 C4orf26Q17RF5 130 aa5.64□□□□□ -1.51
AC004540.1-204ENST00000449537 H1FX-AS1Q4G0G2 97 aa5.62□□□□□ -1.51
AC004540.1-204ENST00000449537 SMIM26A0A096LP01 95 aa5.61□□□□□ -1.51
AC004540.1-204ENST00000449537 SPTSSBQ8NFR3 76 aa5.6□□□□□ -1.51
AC004540.1-204ENST00000449537 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
AC004540.1-204ENST00000449537 V9GYY9 64 aa5.58□□□□□ -1.52
AC004540.1-204ENST00000449537 SPRR2GQ9BYE4 73 aa5.56□□□□□ -1.52
AC004540.1-204ENST00000449537 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
AC004540.1-204ENST00000449537 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
AC004540.1-204ENST00000449537 S4R3F8 94 aa5.53□□□□□ -1.52
AC004540.1-204ENST00000449537 Q1T7F1 81 aa5.47□□□□□ -1.53
AC004540.1-204ENST00000449537 PRR15LQ9BU68 103 aa5.47□□□□□ -1.53
AC004540.1-204ENST00000449537 CSAG1Q6PB30 78 aa5.45□□□□□ -1.54
AC004540.1-204ENST00000449537 LCA10Q71F78 164 aa5.45□□□□□ -1.54
AC004540.1-204ENST00000449537 SEC61GP60059 68 aa5.44□□□□□ -1.54
AC004540.1-204ENST00000449537 LINC01558Q9Y6Z2 57 aa5.43□□□□□ -1.54
AC004540.1-204ENST00000449537 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
AC004540.1-204ENST00000449537 A0A1B0GU69 56 aa5.39□□□□□ -1.55
AC004540.1-204ENST00000449537 KRTAP3-3Q9BYR6 98 aa5.38□□□□□ -1.55
AC004540.1-204ENST00000449537 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
AC004540.1-204ENST00000449537 H0YAA0 97 aa5.36□□□□□ -1.55
AC004540.1-204ENST00000449537 PSPHP1O15172 72 aa5.35□□□□□ -1.55
AC004540.1-204ENST00000449537 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
AC004540.1-204ENST00000449537 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
AC004540.1-204ENST00000449537 A6NED7 52 aa5.27□□□□□ -1.57
AC004540.1-204ENST00000449537 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
AC004540.1-204ENST00000449537 KRTAP12-2P59991 146 aa5.25□□□□□ -1.57
AC004540.1-204ENST00000449537 CRIPTQ9P021 101 aa5.24□□□□□ -1.57
AC004540.1-204ENST00000449537 UQCR11O14957 56 aa5.23□□□□□ -1.57
AC004540.1-204ENST00000449537 MT1XP80297 61 aa5.22□□□□□ -1.57
AC004540.1-204ENST00000449537 ADM2Q7Z4H4 148 aa5.2□□□□□ -1.58
AC004540.1-204ENST00000449537 A0A1B0GU33 70 aa5.19□□□□□ -1.58
AC004540.1-204ENST00000449537 BRK1Q8WUW1 75 aa5.19□□□□□ -1.58
AC004540.1-204ENST00000449537 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
AC004540.1-204ENST00000449537 KRTAP5-10Q6L8G5 202 aa5.17□□□□□ -1.58
AC004540.1-204ENST00000449537 MIR22HGQ0VDD5 57 aa5.16□□□□□ -1.58
AC004540.1-204ENST00000449537 CDC42SE1Q9NRR8 79 aa5.16□□□□□ -1.58
AC004540.1-204ENST00000449537 KRTAP3-2Q9BYR7 98 aa5.12□□□□□ -1.59
AC004540.1-204ENST00000449537 SPATA8Q6RVD6 105 aa5.1□□□□□ -1.59
AC004540.1-204ENST00000449537 R4GN34 69 aa5.1□□□□□ -1.59
AC004540.1-204ENST00000449537 M0QZ58 72 aa5.09□□□□□ -1.59
AC004540.1-204ENST00000449537 P0C880 135 aa5.09□□□□□ -1.59
AC004540.1-204ENST00000449537 PRO0628Q9UI54 55 aa5.09□□□□□ -1.59
AC004540.1-204ENST00000449537 KRTAP5-7Q6L8G8 165 aa5.08□□□□□ -1.6
AC004540.1-204ENST00000449537 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
AC004540.1-204ENST00000449537 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
AC004540.1-204ENST00000449537 HMCN1Q96RW7 5635 aa5.06□□□□□ -1.6
AC004540.1-204ENST00000449537 K7ERS5 55 aa5.06□□□□□ -1.6
AC004540.1-204ENST00000449537 MT4P47944 62 aa5.03□□□□□ -1.6
AC004540.1-204ENST00000449537 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
AC004540.1-204ENST00000449537 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
AC004540.1-204ENST00000449537 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
AC004540.1-204ENST00000449537 A0A0D9SG42 100 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms