RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 LINC00472Q9H8W2 130 aa8.83□□□□□ -1
COLCA2-206ENST00000638573 DEFB116Q30KQ4 102 aa8.82□□□□□ -1
COLCA2-206ENST00000638573 J3KT08 172 aa8.8□□□□□ -1
COLCA2-206ENST00000638573 SMCPP49901 116 aaPredicted RBP8.79□□□□□ -1
COLCA2-206ENST00000638573 RPL37P61927 97 aaKnown RBP8.79□□□□□ -1
COLCA2-206ENST00000638573 PRO0461Q9UI25 63 aa8.79□□□□□ -1
COLCA2-206ENST00000638573 DSCR10P59022 87 aa8.76□□□□□ -1.01
COLCA2-206ENST00000638573 MT1HP80294 61 aa8.76□□□□□ -1.01
COLCA2-206ENST00000638573 NREPQ16612 68 aa8.76□□□□□ -1.01
COLCA2-206ENST00000638573 KRTAP9-6A0A140TA67 174 aa8.75□□□□□ -1.01
COLCA2-206ENST00000638573 F8W1H4 67 aa8.75□□□□□ -1.01
COLCA2-206ENST00000638573 LINC00313P59037 77 aa8.75□□□□□ -1.01
COLCA2-206ENST00000638573 IGHV6-1A0A0B4J1U7 121 aa8.74□□□□□ -1.01
COLCA2-206ENST00000638573 NDUFB1O75438 58 aa8.73□□□□□ -1.01
COLCA2-206ENST00000638573 Q75L30 129 aa8.73□□□□□ -1.01
COLCA2-206ENST00000638573 A0A1B0GVX0 72 aa8.72□□□□□ -1.01
COLCA2-206ENST00000638573 C8orf87E5RJ46 101 aa8.71□□□□□ -1.02
COLCA2-206ENST00000638573 ATP11AUNQ6ZP68 121 aa8.7□□□□□ -1.02
COLCA2-206ENST00000638573 C20orf166-AS1Q96NR2 134 aa8.68□□□□□ -1.02
COLCA2-206ENST00000638573 A8MWP4 228 aa8.67□□□□□ -1.02
COLCA2-206ENST00000638573 A8MUU9 505 aa8.66□□□□□ -1.02
COLCA2-206ENST00000638573 ETDBQ3ZM63 59 aa8.65□□□□□ -1.02
COLCA2-206ENST00000638573 NOTCH2NLQ7Z3S9 236 aa8.64□□□□□ -1.03
COLCA2-206ENST00000638573 KRTAP16-1A8MUX0 517 aa8.62□□□□□ -1.03
COLCA2-206ENST00000638573 BPY2O14599 106 aa8.62□□□□□ -1.03
COLCA2-206ENST00000638573 Q6ZVQ6 151 aa8.62□□□□□ -1.03
COLCA2-206ENST00000638573 UBL5Q9BZL1 73 aa8.62□□□□□ -1.03
COLCA2-206ENST00000638573 IGKV3D-7A0A0C4DH55 119 aa8.61□□□□□ -1.03
COLCA2-206ENST00000638573 PRR15Q8IV56 129 aa8.6□□□□□ -1.03
COLCA2-206ENST00000638573 C8orf17Q9NRJ1 99 aa8.6□□□□□ -1.03
COLCA2-206ENST00000638573 LORP23490 312 aaPredicted RBP8.58□□□□□ -1.04
COLCA2-206ENST00000638573 KRTAP10-6P60371 365 aaPredicted RBP8.58□□□□□ -1.04
COLCA2-206ENST00000638573 LINC00846Q9NV44 126 aa8.58□□□□□ -1.04
COLCA2-206ENST00000638573 A0A1B0GV90 55 aa8.56□□□□□ -1.04
COLCA2-206ENST00000638573 K7EQZ3 153 aa8.56□□□□□ -1.04
COLCA2-206ENST00000638573 COX6B2Q6YFQ2 88 aa8.55□□□□□ -1.04
COLCA2-206ENST00000638573 MMP24-AS1A0A0U1RRL7 71 aa8.51□□□□□ -1.05
COLCA2-206ENST00000638573 M0R2T5 61 aa8.51□□□□□ -1.05
COLCA2-206ENST00000638573 CRCT1Q9UGL9 99 aa8.51□□□□□ -1.05
COLCA2-206ENST00000638573 TMEM254Q8TBM7 123 aa8.5□□□□□ -1.05
COLCA2-206ENST00000638573 hDV103S1A0JD37 113 aa8.49□□□□□ -1.05
COLCA2-206ENST00000638573 Q8N9P0 234 aaPredicted RBP8.49□□□□□ -1.05
COLCA2-206ENST00000638573 ACYP1P07311 99 aa8.48□□□□□ -1.05
COLCA2-206ENST00000638573 Q8N9L7 120 aa8.48□□□□□ -1.05
COLCA2-206ENST00000638573 MRPL34Q9BQ48 92 aaKnown RBP8.48□□□□□ -1.05
COLCA2-206ENST00000638573 FLGP20930 4061 aaPredicted RBP8.46□□□□□ -1.05
COLCA2-206ENST00000638573 ZCCHC13Q8WW36 166 aaKnown RBP8.46□□□□□ -1.06
COLCA2-206ENST00000638573 FSIP2Q5CZC0 6907 aa8.45□□□□□ -1.06
COLCA2-206ENST00000638573 FAM240AA0A1B0GVK7 77 aa8.44□□□□□ -1.06
COLCA2-206ENST00000638573 NDUFS5O43920 106 aa8.44□□□□□ -1.06
COLCA2-206ENST00000638573 CXCL6P80162 114 aa8.43□□□□□ -1.06
COLCA2-206ENST00000638573 CASC2Q6XLA1 102 aa8.43□□□□□ -1.06
COLCA2-206ENST00000638573 WFDC13Q8IUB5 93 aa8.43□□□□□ -1.06
COLCA2-206ENST00000638573 HCG22E2RYF7 251 aa8.39□□□□□ -1.07
COLCA2-206ENST00000638573 ATP5EP2Q5VTU8 51 aa8.36□□□□□ -1.07
COLCA2-206ENST00000638573 J3QR89 54 aa8.33□□□□□ -1.08
COLCA2-206ENST00000638573 SPINK7P58062 85 aa8.32□□□□□ -1.08
COLCA2-206ENST00000638573 RBM12B-AS1Q9P1G2 102 aa8.31□□□□□ -1.08
COLCA2-206ENST00000638573 FAM236DA0A1B0GTK5 79 aa8.3□□□□□ -1.08
COLCA2-206ENST00000638573 LCE2BO14633 110 aa8.3□□□□□ -1.08
COLCA2-206ENST00000638573 FAM236CP0DP71 79 aa8.3□□□□□ -1.08
COLCA2-206ENST00000638573 HRES1P13985 223 aa8.28□□□□□ -1.08
COLCA2-206ENST00000638573 LINC00643Q86TS7 51 aa8.27□□□□□ -1.09
COLCA2-206ENST00000638573 KRTAP9-8Q9BYQ0 159 aa8.27□□□□□ -1.09
COLCA2-206ENST00000638573 HIST1H4AP62805 103 aaKnown RBP8.26□□□□□ -1.09
COLCA2-206ENST00000638573 TP53AIP1Q9HCN2 124 aa8.23□□□□□ -1.09
COLCA2-206ENST00000638573 Q5W150 140 aa8.22□□□□□ -1.09
COLCA2-206ENST00000638573 MPLKIPQ8TAP9 179 aa8.22□□□□□ -1.09
COLCA2-206ENST00000638573 IGKV2D-30A0A075B6S6 120 aa8.21□□□□□ -1.1
COLCA2-206ENST00000638573 IGKV2-30P06310 120 aa8.21□□□□□ -1.1
COLCA2-206ENST00000638573 C7orf65Q6ZTY9 151 aa8.21□□□□□ -1.1
COLCA2-206ENST00000638573 MT2AP02795 61 aa8.16□□□□□ -1.1
COLCA2-206ENST00000638573 A0A087WVE0 104 aa8.13□□□□□ -1.11
COLCA2-206ENST00000638573 K7ERU9 68 aa8.13□□□□□ -1.11
COLCA2-206ENST00000638573 MT1FP04733 61 aa8.12□□□□□ -1.11
COLCA2-206ENST00000638573 TRAV22A0A0B4J277 110 aa8.08□□□□□ -1.12
COLCA2-206ENST00000638573 UQCRQO14949 82 aa8.06□□□□□ -1.12
COLCA2-206ENST00000638573 USH2AO75445 5202 aa8.04□□□□□ -1.12
COLCA2-206ENST00000638573 LOC101927531A0A1B0GV80 90 aa8.01□□□□□ -1.13
COLCA2-206ENST00000638573 ATOX1O00244 68 aa8.01□□□□□ -1.13
COLCA2-206ENST00000638573 C4orf26Q17RF5 130 aa8.01□□□□□ -1.13
COLCA2-206ENST00000638573 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
COLCA2-206ENST00000638573 H0Y9P7 68 aa8□□□□□ -1.13
COLCA2-206ENST00000638573 KRTAP10-10P60014 251 aa8□□□□□ -1.13
COLCA2-206ENST00000638573 H1FX-AS1Q4G0G2 97 aa8□□□□□ -1.13
COLCA2-206ENST00000638573 SSPOA2VEC9 5147 aa7.98□□□□□ -1.13
COLCA2-206ENST00000638573 SCGB1A1P11684 91 aa7.97□□□□□ -1.13
COLCA2-206ENST00000638573 IMUPQ9GZP8 106 aa7.97□□□□□ -1.13
COLCA2-206ENST00000638573 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.96□□□□□ -1.14
COLCA2-206ENST00000638573 CYP4F30PQ9H0H9 118 aa7.96□□□□□ -1.14
COLCA2-206ENST00000638573 MT-ATP8P03928 68 aa7.94□□□□□ -1.14
COLCA2-206ENST00000638573 MP68P56378 58 aa7.94□□□□□ -1.14
COLCA2-206ENST00000638573 OCR1Q9BZK8 76 aa7.94□□□□□ -1.14
COLCA2-206ENST00000638573 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
COLCA2-206ENST00000638573 C1orf64Q8NEQ6 169 aa7.92□□□□□ -1.14
COLCA2-206ENST00000638573 LINC00208Q96KT6 92 aa7.89□□□□□ -1.15
COLCA2-206ENST00000638573 C5orf47Q569G3 176 aa7.88□□□□□ -1.15
COLCA2-206ENST00000638573 KRTAP9-7A8MTY7 169 aa7.87□□□□□ -1.15
COLCA2-206ENST00000638573 FAM236AA0A1B0GUQ0 79 aa7.84□□□□□ -1.15
COLCA2-206ENST00000638573 FAM236BA0A1B0GV22 79 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms