RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 FLGP20930 4061 aaPredicted RBP9.65□□□□□ -0.86
CLN6-221ENST00000637494 RBM12B-AS1Q9P1G2 102 aa9.64□□□□□ -0.87
CLN6-221ENST00000637494 JMJD7-PLA2G4BH0Y9G9 81 aa9.62□□□□□ -0.87
CLN6-221ENST00000637494 NDUFB1O75438 58 aa9.61□□□□□ -0.87
CLN6-221ENST00000637494 Q6ZQT0 140 aa9.59□□□□□ -0.87
CLN6-221ENST00000637494 FSIP2Q5CZC0 6907 aa9.58□□□□□ -0.88
CLN6-221ENST00000637494 A0A1B0GW54 56 aa9.57□□□□□ -0.88
CLN6-221ENST00000637494 LYRM7Q5U5X0 104 aa9.57□□□□□ -0.88
CLN6-221ENST00000637494 NAA38Q9BRA0 125 aaKnown RBP9.57□□□□□ -0.88
CLN6-221ENST00000637494 PDE6GP18545 87 aa9.56□□□□□ -0.88
CLN6-221ENST00000637494 LOC110117498A0A087WWA1 95 aa9.54□□□□□ -0.88
CLN6-221ENST00000637494 MTURNQ8N3F0 131 aa9.54□□□□□ -0.88
CLN6-221ENST00000637494 SMIM6P0DI80 62 aa9.53□□□□□ -0.88
CLN6-221ENST00000637494 HRES1P13985 223 aa9.53□□□□□ -0.88
CLN6-221ENST00000637494 ZCCHC13Q8WW36 166 aaKnown RBP9.52□□□□□ -0.89
CLN6-221ENST00000637494 MPLKIPQ8TAP9 179 aa9.5□□□□□ -0.89
CLN6-221ENST00000637494 A8MWP4 228 aa9.49□□□□□ -0.89
CLN6-221ENST00000637494 TSTD3H0UI37 97 aa9.48□□□□□ -0.89
CLN6-221ENST00000637494 C14orf132Q9NPU4 83 aa9.48□□□□□ -0.89
CLN6-221ENST00000637494 KRTAP9-8Q9BYQ0 159 aa9.47□□□□□ -0.89
CLN6-221ENST00000637494 C8orf17Q9NRJ1 99 aa9.47□□□□□ -0.89
CLN6-221ENST00000637494 BATFQ16520 125 aa9.46□□□□□ -0.9
CLN6-221ENST00000637494 NREPQ16612 68 aa9.45□□□□□ -0.9
CLN6-221ENST00000637494 Q8N9P0 234 aaPredicted RBP9.45□□□□□ -0.9
CLN6-221ENST00000637494 SPINK7P58062 85 aa9.44□□□□□ -0.9
CLN6-221ENST00000637494 IGKV3D-7A0A0C4DH55 119 aa9.41□□□□□ -0.9
CLN6-221ENST00000637494 Q6ZVQ6 151 aa9.4□□□□□ -0.9
CLN6-221ENST00000637494 PRR15Q8IV56 129 aa9.38□□□□□ -0.91
CLN6-221ENST00000637494 H3BT86 120 aa9.35□□□□□ -0.91
CLN6-221ENST00000637494 MT2AP02795 61 aa9.35□□□□□ -0.91
CLN6-221ENST00000637494 C9orf118A6NHY6 69 aa9.34□□□□□ -0.91
CLN6-221ENST00000637494 TMEM254Q8TBM7 123 aa9.33□□□□□ -0.92
CLN6-221ENST00000637494 WFDC13Q8IUB5 93 aa9.32□□□□□ -0.92
CLN6-221ENST00000637494 MRPL34Q9BQ48 92 aaKnown RBP9.32□□□□□ -0.92
CLN6-221ENST00000637494 KRTAP10-10P60014 251 aa9.31□□□□□ -0.92
CLN6-221ENST00000637494 A0A1W2PPM0 123 aa9.3□□□□□ -0.92
CLN6-221ENST00000637494 MMP24-AS1A0A0U1RRL7 71 aa9.29□□□□□ -0.92
CLN6-221ENST00000637494 NDUFS5O43920 106 aa9.29□□□□□ -0.92
CLN6-221ENST00000637494 hDV103S1A0JD37 113 aa9.28□□□□□ -0.92
CLN6-221ENST00000637494 K7EQZ3 153 aa9.26□□□□□ -0.93
CLN6-221ENST00000637494 BPY2O14599 106 aa9.26□□□□□ -0.93
CLN6-221ENST00000637494 TAX1BP3O14907 124 aa9.26□□□□□ -0.93
CLN6-221ENST00000637494 MT1FP04733 61 aa9.26□□□□□ -0.93
CLN6-221ENST00000637494 LOC105371267A0A1B0GV96 52 aa9.19□□□□□ -0.94
CLN6-221ENST00000637494 SPCS1Q9Y6A9 102 aa9.19□□□□□ -0.94
CLN6-221ENST00000637494 KRTAP9-3Q9BYQ3 159 aa9.18□□□□□ -0.94
CLN6-221ENST00000637494 IGKV2D-30A0A075B6S6 120 aa9.14□□□□□ -0.95
CLN6-221ENST00000637494 IGKV2-30P06310 120 aa9.14□□□□□ -0.95
CLN6-221ENST00000637494 CASC2Q6XLA1 102 aa9.14□□□□□ -0.95
CLN6-221ENST00000637494 LCE2BO14633 110 aa9.13□□□□□ -0.95
CLN6-221ENST00000637494 H1FX-AS1Q4G0G2 97 aa9.13□□□□□ -0.95
CLN6-221ENST00000637494 C7orf65Q6ZTY9 151 aa9.12□□□□□ -0.95
CLN6-221ENST00000637494 USH2AO75445 5202 aa9.09□□□□□ -0.95
CLN6-221ENST00000637494 HCG22E2RYF7 251 aa9.09□□□□□ -0.95
CLN6-221ENST00000637494 Q8N9L7 120 aa9.09□□□□□ -0.95
CLN6-221ENST00000637494 UBL5Q9BZL1 73 aa9.09□□□□□ -0.95
CLN6-221ENST00000637494 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.08□□□□□ -0.96
CLN6-221ENST00000637494 COL5A1-AS1Q5SY13 56 aa9.07□□□□□ -0.96
CLN6-221ENST00000637494 Q5W150 140 aa9.06□□□□□ -0.96
CLN6-221ENST00000637494 LINC00846Q9NV44 126 aa9.06□□□□□ -0.96
CLN6-221ENST00000637494 SMCPP49901 116 aaPredicted RBP9.05□□□□□ -0.96
CLN6-221ENST00000637494 CXCL6P80162 114 aa9.05□□□□□ -0.96
CLN6-221ENST00000637494 KRTAP19-1Q8IUB9 90 aa9.05□□□□□ -0.96
CLN6-221ENST00000637494 SSPOA2VEC9 5147 aa9.03□□□□□ -0.96
CLN6-221ENST00000637494 KRTAP9-7A8MTY7 169 aa9.01□□□□□ -0.97
CLN6-221ENST00000637494 K7EP34 96 aa8.99□□□□□ -0.97
CLN6-221ENST00000637494 PRO0461Q9UI25 63 aa8.97□□□□□ -0.97
CLN6-221ENST00000637494 C4orf26Q17RF5 130 aa8.96□□□□□ -0.98
CLN6-221ENST00000637494 GTF2H5Q6ZYL4 71 aa8.93□□□□□ -0.98
CLN6-221ENST00000637494 TP53AIP1Q9HCN2 124 aa8.88□□□□□ -0.99
CLN6-221ENST00000637494 KRTAP19-6Q3LI70 58 aa8.87□□□□□ -0.99
CLN6-221ENST00000637494 FCGBPQ9Y6R7 5405 aaPredicted RBP8.87□□□□□ -0.99
CLN6-221ENST00000637494 F8W1H4 67 aa8.86□□□□□ -0.99
CLN6-221ENST00000637494 C5orf47Q569G3 176 aa8.82□□□□□ -1
CLN6-221ENST00000637494 S4R3F8 94 aa8.81□□□□□ -1
CLN6-221ENST00000637494 ETDBQ3ZM63 59 aa8.8□□□□□ -1
CLN6-221ENST00000637494 C1orf64Q8NEQ6 169 aa8.8□□□□□ -1
CLN6-221ENST00000637494 FAM236AA0A1B0GUQ0 79 aa8.79□□□□□ -1
CLN6-221ENST00000637494 FAM236BA0A1B0GV22 79 aa8.79□□□□□ -1
CLN6-221ENST00000637494 CSAG1Q6PB30 78 aa8.77□□□□□ -1.01
CLN6-221ENST00000637494 PCP4L1A6NKN8 68 aa8.76□□□□□ -1.01
CLN6-221ENST00000637494 KRTAP3-1Q9BYR8 98 aa8.73□□□□□ -1.01
CLN6-221ENST00000637494 LCA10Q71F78 164 aa8.7□□□□□ -1.02
CLN6-221ENST00000637494 ACYP1P07311 99 aa8.68□□□□□ -1.02
CLN6-221ENST00000637494 TRAV22A0A0B4J277 110 aa8.65□□□□□ -1.02
CLN6-221ENST00000637494 CYP4F30PQ9H0H9 118 aa8.65□□□□□ -1.02
CLN6-221ENST00000637494 LOC101927531A0A1B0GV80 90 aa8.63□□□□□ -1.03
CLN6-221ENST00000637494 ATP5EP2Q5VTU8 51 aa8.62□□□□□ -1.03
CLN6-221ENST00000637494 MACF1Q9UPN3 7388 aaKnown RBP8.6□□□□□ -1.03
CLN6-221ENST00000637494 HIST1H4AP62805 103 aaKnown RBP8.59□□□□□ -1.03
CLN6-221ENST00000637494 FAM240AA0A1B0GVK7 77 aa8.58□□□□□ -1.04
CLN6-221ENST00000637494 Q5VV11 94 aa8.58□□□□□ -1.04
CLN6-221ENST00000637494 UQCRQO14949 82 aa8.55□□□□□ -1.04
CLN6-221ENST00000637494 KLKP1Q107X0 134 aa8.55□□□□□ -1.04
CLN6-221ENST00000637494 ATOX1O00244 68 aa8.54□□□□□ -1.04
CLN6-221ENST00000637494 SPRR2GQ9BYE4 73 aa8.53□□□□□ -1.04
CLN6-221ENST00000637494 A6NN06 94 aa8.51□□□□□ -1.05
CLN6-221ENST00000637494 H0Y9P7 68 aa8.51□□□□□ -1.05
CLN6-221ENST00000637494 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
CLN6-221ENST00000637494 KRTAP6-3Q3LI67 103 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms