RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 A0A1B0GVX0 72 aa12.32□□□□□ -0.44
SSX2IP-209ENST00000603677 IGHV6-1A0A0B4J1U7 121 aa12.31□□□□□ -0.44
SSX2IP-209ENST00000603677 C9orf118A6NHY6 69 aa12.31□□□□□ -0.44
SSX2IP-209ENST00000603677 NDUFB1O75438 58 aa12.28□□□□□ -0.44
SSX2IP-209ENST00000603677 H3BT86 120 aa12.26□□□□□ -0.45
SSX2IP-209ENST00000603677 NOTCH2NLQ7Z3S9 236 aa12.26□□□□□ -0.45
SSX2IP-209ENST00000603677 A0A1W2PPM0 123 aa12.24□□□□□ -0.45
SSX2IP-209ENST00000603677 LCE2DQ5TA82 110 aaPredicted RBP12.24□□□□□ -0.45
SSX2IP-209ENST00000603677 TAX1BP3O14907 124 aa12.23□□□□□ -0.45
SSX2IP-209ENST00000603677 C14orf132Q9NPU4 83 aa12.23□□□□□ -0.45
SSX2IP-209ENST00000603677 M0R2T5 61 aa12.21□□□□□ -0.45
SSX2IP-209ENST00000603677 A8MWP4 228 aa12.18□□□□□ -0.46
SSX2IP-209ENST00000603677 KRTAP9-6A0A140TA67 174 aa12.16□□□□□ -0.46
SSX2IP-209ENST00000603677 LORP23490 312 aaPredicted RBP12.16□□□□□ -0.46
SSX2IP-209ENST00000603677 KRTAP10-6P60371 365 aaPredicted RBP12.16□□□□□ -0.46
SSX2IP-209ENST00000603677 FLGP20930 4061 aaPredicted RBP12.15□□□□□ -0.46
SSX2IP-209ENST00000603677 NREPQ16612 68 aa12.15□□□□□ -0.46
SSX2IP-209ENST00000603677 Q8N9P0 234 aaPredicted RBP12.13□□□□□ -0.47
SSX2IP-209ENST00000603677 C8orf17Q9NRJ1 99 aa12.09□□□□□ -0.47
SSX2IP-209ENST00000603677 ZCCHC13Q8WW36 166 aaKnown RBP12.08□□□□□ -0.48
SSX2IP-209ENST00000603677 IGKV3D-7A0A0C4DH55 119 aa12.07□□□□□ -0.48
SSX2IP-209ENST00000603677 COL5A1-AS1Q5SY13 56 aa12.07□□□□□ -0.48
SSX2IP-209ENST00000603677 PRR15Q8IV56 129 aa12.07□□□□□ -0.48
SSX2IP-209ENST00000603677 RBM12B-AS1Q9P1G2 102 aa12.07□□□□□ -0.48
SSX2IP-209ENST00000603677 SPCS1Q9Y6A9 102 aa12.06□□□□□ -0.48
SSX2IP-209ENST00000603677 MPLKIPQ8TAP9 179 aa12.04□□□□□ -0.48
SSX2IP-209ENST00000603677 Q6ZVQ6 151 aa12.01□□□□□ -0.49
SSX2IP-209ENST00000603677 HRES1P13985 223 aa12□□□□□ -0.49
SSX2IP-209ENST00000603677 MTURNQ8N3F0 131 aa11.99□□□□□ -0.49
SSX2IP-209ENST00000603677 FAM236DA0A1B0GTK5 79 aa11.97□□□□□ -0.49
SSX2IP-209ENST00000603677 FAM236CP0DP71 79 aa11.97□□□□□ -0.49
SSX2IP-209ENST00000603677 TMEM254Q8TBM7 123 aa11.96□□□□□ -0.49
SSX2IP-209ENST00000603677 BPY2O14599 106 aa11.93□□□□□ -0.5
SSX2IP-209ENST00000603677 SPINK7P58062 85 aa11.93□□□□□ -0.5
SSX2IP-209ENST00000603677 MRPL34Q9BQ48 92 aaKnown RBP11.93□□□□□ -0.5
SSX2IP-209ENST00000603677 MMP24-AS1A0A0U1RRL7 71 aa11.91□□□□□ -0.5
SSX2IP-209ENST00000603677 SMCPP49901 116 aaPredicted RBP11.9□□□□□ -0.5
SSX2IP-209ENST00000603677 hDV103S1A0JD37 113 aa11.89□□□□□ -0.51
SSX2IP-209ENST00000603677 K7EP34 96 aa11.88□□□□□ -0.51
SSX2IP-209ENST00000603677 K7EQZ3 153 aa11.88□□□□□ -0.51
SSX2IP-209ENST00000603677 PRO0461Q9UI25 63 aa11.86□□□□□ -0.51
SSX2IP-209ENST00000603677 GTF2H5Q6ZYL4 71 aa11.84□□□□□ -0.51
SSX2IP-209ENST00000603677 UBL5Q9BZL1 73 aa11.81□□□□□ -0.52
SSX2IP-209ENST00000603677 FSIP2Q5CZC0 6907 aa11.8□□□□□ -0.52
SSX2IP-209ENST00000603677 CRCT1Q9UGL9 99 aa11.78□□□□□ -0.52
SSX2IP-209ENST00000603677 F8W1H4 67 aa11.77□□□□□ -0.53
SSX2IP-209ENST00000603677 WFDC13Q8IUB5 93 aa11.77□□□□□ -0.53
SSX2IP-209ENST00000603677 KRTAP9-8Q9BYQ0 159 aa11.77□□□□□ -0.53
SSX2IP-209ENST00000603677 NDUFS5O43920 106 aa11.75□□□□□ -0.53
SSX2IP-209ENST00000603677 LINC00846Q9NV44 126 aa11.73□□□□□ -0.53
SSX2IP-209ENST00000603677 CASC2Q6XLA1 102 aa11.72□□□□□ -0.53
SSX2IP-209ENST00000603677 PCP4L1A6NKN8 68 aa11.66□□□□□ -0.54
SSX2IP-209ENST00000603677 CXCL6P80162 114 aa11.66□□□□□ -0.54
SSX2IP-209ENST00000603677 Q8N9L7 120 aa11.65□□□□□ -0.54
SSX2IP-209ENST00000603677 C7orf65Q6ZTY9 151 aa11.63□□□□□ -0.55
SSX2IP-209ENST00000603677 HCG22E2RYF7 251 aa11.61□□□□□ -0.55
SSX2IP-209ENST00000603677 ETDBQ3ZM63 59 aa11.59□□□□□ -0.55
SSX2IP-209ENST00000603677 MT2AP02795 61 aa11.58□□□□□ -0.56
SSX2IP-209ENST00000603677 Q5W150 140 aa11.58□□□□□ -0.56
SSX2IP-209ENST00000603677 H1FX-AS1Q4G0G2 97 aa11.54□□□□□ -0.56
SSX2IP-209ENST00000603677 IGKV2D-30A0A075B6S6 120 aa11.53□□□□□ -0.56
SSX2IP-209ENST00000603677 IGKV2-30P06310 120 aa11.53□□□□□ -0.56
SSX2IP-209ENST00000603677 ACYP1P07311 99 aa11.5□□□□□ -0.57
SSX2IP-209ENST00000603677 TP53AIP1Q9HCN2 124 aa11.5□□□□□ -0.57
SSX2IP-209ENST00000603677 KRTAP10-10P60014 251 aa11.47□□□□□ -0.57
SSX2IP-209ENST00000603677 MT1FP04733 61 aa11.46□□□□□ -0.57
SSX2IP-209ENST00000603677 FAM240AA0A1B0GVK7 77 aa11.42□□□□□ -0.58
SSX2IP-209ENST00000603677 KRTAP9-3Q9BYQ3 159 aa11.4□□□□□ -0.58
SSX2IP-209ENST00000603677 ATP5EP2Q5VTU8 51 aa11.35□□□□□ -0.59
SSX2IP-209ENST00000603677 C4orf26Q17RF5 130 aa11.33□□□□□ -0.6
SSX2IP-209ENST00000603677 LCE2BO14633 110 aa11.26□□□□□ -0.61
SSX2IP-209ENST00000603677 USH2AO75445 5202 aa11.19□□□□□ -0.62
SSX2IP-209ENST00000603677 C1orf64Q8NEQ6 169 aa11.19□□□□□ -0.62
SSX2IP-209ENST00000603677 TRAV22A0A0B4J277 110 aa11.18□□□□□ -0.62
SSX2IP-209ENST00000603677 LINC00643Q86TS7 51 aa11.16□□□□□ -0.62
SSX2IP-209ENST00000603677 LOC101927531A0A1B0GV80 90 aa11.15□□□□□ -0.62
SSX2IP-209ENST00000603677 KRTAP3-1Q9BYR8 98 aa11.15□□□□□ -0.62
SSX2IP-209ENST00000603677 CYP4F30PQ9H0H9 118 aa11.15□□□□□ -0.62
SSX2IP-209ENST00000603677 HIST1H4AP62805 103 aaKnown RBP11.14□□□□□ -0.63
SSX2IP-209ENST00000603677 UQCRQO14949 82 aa11.12□□□□□ -0.63
SSX2IP-209ENST00000603677 S4R3F8 94 aa11.12□□□□□ -0.63
SSX2IP-209ENST00000603677 ATOX1O00244 68 aa11.1□□□□□ -0.63
SSX2IP-209ENST00000603677 SSPOA2VEC9 5147 aa11.09□□□□□ -0.63
SSX2IP-209ENST00000603677 CSAG1Q6PB30 78 aa11.09□□□□□ -0.63
SSX2IP-209ENST00000603677 A0A1B0GV90 55 aa11.04□□□□□ -0.64
SSX2IP-209ENST00000603677 C5orf47Q569G3 176 aa11.04□□□□□ -0.64
SSX2IP-209ENST00000603677 KRTAP19-1Q8IUB9 90 aa11.03□□□□□ -0.64
SSX2IP-209ENST00000603677 J3QR89 54 aa11.01□□□□□ -0.65
SSX2IP-209ENST00000603677 LCA10Q71F78 164 aa11.01□□□□□ -0.65
SSX2IP-209ENST00000603677 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.99□□□□□ -0.65
SSX2IP-209ENST00000603677 H0Y9P7 68 aa10.97□□□□□ -0.65
SSX2IP-209ENST00000603677 KRTAP19-6Q3LI70 58 aa10.96□□□□□ -0.65
SSX2IP-209ENST00000603677 A0A087WVE0 104 aa10.93□□□□□ -0.66
SSX2IP-209ENST00000603677 FAM236AA0A1B0GUQ0 79 aa10.91□□□□□ -0.66
SSX2IP-209ENST00000603677 FAM236BA0A1B0GV22 79 aa10.91□□□□□ -0.66
SSX2IP-209ENST00000603677 KRTAP9-7A8MTY7 169 aa10.91□□□□□ -0.66
SSX2IP-209ENST00000603677 KRTAP3-3Q9BYR6 98 aa10.9□□□□□ -0.66
SSX2IP-209ENST00000603677 KRTAP3-2Q9BYR7 98 aa10.9□□□□□ -0.66
SSX2IP-209ENST00000603677 FCGBPQ9Y6R7 5405 aaPredicted RBP10.88□□□□□ -0.67
SSX2IP-209ENST00000603677 A8MUN3 132 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms